Callithrix jacchus (white-tufted-ear marmoset): 100398672
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Entry
100398672 CDS
T03264
Symbol
GABRB1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04080
Neuroactive ligand-receptor interaction
cjc04082
Neuroactive ligand signaling
cjc04723
Retrograde endocannabinoid signaling
cjc04726
Serotonergic synapse
cjc04727
GABAergic synapse
cjc05032
Morphine addiction
cjc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100398672 (GABRB1)
04082 Neuroactive ligand signaling
100398672 (GABRB1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100398672 (GABRB1)
04726 Serotonergic synapse
100398672 (GABRB1)
04723 Retrograde endocannabinoid signaling
100398672 (GABRB1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
100398672 (GABRB1)
05033 Nicotine addiction
100398672 (GABRB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100398672 (GABRB1)
Ion channels [BR:
cjc04040
]
Ligand-gated channels
GABA-A
100398672 (GABRB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
100398672
NCBI-ProteinID:
XP_002745915
Ensembl:
ENSCJAG00000018976
UniProt:
U3DHM8
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All DBs
Position
3:complement(142583281..143029162)
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AA seq
474 aa
AA seq
DB search
MWTVQNRESLGLLSFPVMITMVCCAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPP
VDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNKLEMNKVQ
VDAHGNILLSTLEIRNETGGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRALDR
HGVPSKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYVH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagtacaaaatcgagagagtctggggcttctttctttccctgtgatgattacc
atggtctgttgtgcacacagcgccaatgaacccagcaacatgtcatacgtgaaagagaca
gtggacagattgctcaaaggatatgacattcgcttgcggccggacttcggaggccccccg
gtggacgtcgggatgcggatcgatgtcgccagcatagacatggtctccgaagtgaatatg
gattatacactcaccatgtatttccagcagtcttggaaagacaaaagactttcttattct
ggaatcccactaaacctcaccctagacaatagggtagctgaccaactctgggtaccagac
acctactttctgaatgacaagaaatcattcgtgcatggggtcacagtgaaaaatcgaatg
attcgactgcaccctgatggaacagttctctatggactccgaatcacaactacagctgcc
tgtatgatggatctgcgaaggtatccactggatgagcagaactgcaccctggagattgaa
agttatggctataccactgatgacattgagttttactggaatggaggagagggggcagtc
actggtgttaataagattgagcttcctcagttttctattgttgactacaagatggtgtct
aagaaggtggagttcacaacaggagcatatccacgactgtcactaagttttcgcctaaag
agaaacattggctacttcattttgcaaacctacatgccttctacactgattacaattctg
tcctgggtgtctttctggatcaactatgatgcctctgcagccagagttgcactaggaatc
acgacagtgctcacaatgacaaccatcagcacccatctcagggagaccctgccaaagatc
ccttatgtcaaagcgattgatatttatctgatgggttgctttgtgtttgtgttcctggct
ctgctggagtatgcctttgtaaattacatcttctttgggaaaggccctcagaaaaaggga
gctagcaaacaagaccagagtgccaatgagaagaacaaactggagatgaataaagtccag
gtcgatgcccacggcaacattctcctcagcaccctggaaatccggaacgagacaggtggc
tctgaagtgctcacgagcgtaagcgaccccaaggccaccatgtactcctacgacagcgcc
agcatccagtaccgcaagcccctgagcagccgcgaagcctacgggcgcgccctggaccgg
cacggggtgcccagcaaggggcgcatccgcaggcgcgcctcccagctcaaagtcaaaatc
cccgatttgactgacgtgaattccatagacaagtggtcccgaatgtttttccccatcacc
ttttctctttttaatgtcgtttattggctttactatgtacactga
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