Callithrix jacchus (white-tufted-ear marmoset): 100398755
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Entry
100398755 CDS
T03264
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03265
Virion - Ebolavirus and Lyssavirus
cjc04514
Cell adhesion molecules
cjc05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
100398755 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100398755 (NCAM1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
100398755 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100398755 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100398755 (NCAM1)
04090 CD molecules [BR:
cjc04090
]
100398755 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
cjc00536
]
100398755 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cjc00537
]
100398755 (NCAM1)
Membrane trafficking [BR:
cjc04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
100398755 (NCAM1)
Cell adhesion molecules [BR:
cjc04515
]
Immunoglobulin superfamily
NCAM1/2
100398755 (NCAM1)
CD molecules [BR:
cjc04090
]
Proteins
100398755 (NCAM1)
Glycosaminoglycan binding proteins [BR:
cjc00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
100398755 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cjc00537
]
Others
100398755 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_4
Ig_6
C1-set
Ig_5
V-set_CD47
Adeno_E3_CR1
Collagen_bind_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
100398755
NCBI-ProteinID:
XP_035120422
LinkDB
All DBs
Position
11:10421999..10738294
Genome browser
AA seq
1179 aa
AA seq
DB search
MTEKEEYMSKEGNVEMEKHSRLLVFNILLKGEVSLQVDIVPSQGEISVGESKFFLCQVAG
DAKDKDISWFSPNGEKLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVTDEEGSE
SEATVNVKIFQKLMFKNAPTPQEFREGEDAVIICDVVSSLPPTIIWKHKGRDVILKKDVR
FIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTIQARQNIVNATA
NLGQSVTLVCDAEGFPEPTMSWTKDGEQIEQEEDNEKYIFSDDSSQLTIRKVDKNDEAEY
VCIAENKAGEQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTST
RNISSEEKASWTRPEKQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDS
QSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKI
YNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTA
QVQFDEPEATGGVPILKYKAEWRAMGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR
LAALNGKGLGEISAASEFKTQPVHSPPPPASASSSTPVPLSPPDTTWPLPALATTEPARE
PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRALSSEWKPEIRLPSGSDHVML
KSLEWNAEYEVYVVAENQQGKSKAAHFVFRTSAQPTAIPANGSPTSGLSTGAIVGILIVI
FVLLLVVVDITCYFLNKCGLFMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEV
RTEEERTPNHDGGKHTEPNETTPLTEPELPADTTATVEDMLPSVTTVTTNSDTITETFAT
AQNSPTSETTTLTSSIAPPATATPDSNSVPAGQATPSKGPSASTSSPAPAAAPKVAPLVD
LSDTPTSTPATSNLSSSVLANQGAVLSPSAPASVGEASKAPPASKPSPAPVPTPTGAASS
LAAAAAPATEAPQAKQESPSTKGPDPEPTQPGAVKSPPEAATALASPKSEAASVSTTNPS
QGEDFKMDEGNFKTPDIDLAKDVFAALGSPAPAAGASGQAPELAPSTADSSVSPAPAKTE
KGPVEAKPECQETETKPAPAEVKTVPNDATQTKENESKA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaggaggagtatatgagcaaagagggaaatgttgagatggagaaacacagc
aggctgctggtcttcaacattcttcttaaaggagaagtttctctgcaggtggatattgtt
cccagccagggggagatcagcgttggagagtccaaattcttcttatgccaagtggcagga
gatgccaaagataaagacatctcctggttctcccccaatggagaaaagctcaccccaaac
cagcagcggatctcagtggtgtggaatgatgattcctcctccaccctcaccatctataac
gccaacattgacgacgccggcatttacaagtgtgtggtcacagacgaggagggcagtgag
tcagaggccaccgtcaacgtgaagatcttccagaagctcatgttcaagaatgcgccaacc
ccgcaggagttccgggagggggaagatgctgtgatcatctgtgatgtggtcagctccctc
ccgccaaccatcatctggaaacacaaaggccgagacgtcatcctgaaaaaagatgtccga
ttcatagtcctgtccaacaactacctgcagatccggggcatcaagaaaacagatgagggc
acttatcgctgtgagggccgaatcctggcacggggggagatcaacttcaaggacattcag
gtcattgtgaatgtgccacccaccatccaggccaggcagaacattgtgaatgccactgcc
aacctgggccagtccgtcaccctcgtgtgcgatgctgaaggcttcccggagcccaccatg
agctggacaaaggatggggaacagatagagcaggaggaagacaacgagaagtacatcttc
agtgatgatagttcccagctgaccatcagaaaggtggataagaacgatgaggccgaatac
gtctgcattgccgagaacaaggccggcgagcaggatgcaaccattcacctcaaagtcttc
gcaaaacccaaaatcacatatgtagagaaccagactgccatggaattggaggagcaggtc
actcttacctgtgaagcctccggagatcccattccctccatcacctggaggacttctacc
cggaatatcagcagcgaagaaaaggcttcgtggactcgaccagagaagcaagagactcta
gatgggcatatggtggtgcgcagccatgcccgcgtgtcgtcactgaccctgaagagcatc
cagtacaccgacgctggagagtacatctgcaccgccagcaacaccattggccaggactcc
cagtccatgtaccttgaagtgcaatatgcccccaagctacagggccctgtggctgtgtac
acttgggaggggaaccaggttaacatcacctgtgaggtatttgcctatcccagtgccaca
atctcgtggtttcgggatggtcagctgctgccaagctccaactacagcaatatcaagatc
tacaacaccccctctgccagctatctggaggtgaccccagattctgagaatgattttgga
aactacaactgtactgcagtgaaccgcattgggcaggagtcattggaattcatccttgtt
caagcagacaccccctcttcaccatccatcgaccaggtggagccatactccagcacagcc
caggtgcagtttgatgaaccagaggccacaggcggggtgcccattctcaaatacaaagct
gagtggagagcaatgggtgaagaagtatggcattccaagtggtatgatgccaaggaagcc
agcatggagggcatcgtcaccatcgtgggcctgaagcccgagacgacatacgctgtcagg
ctagcggcgctcaacggcaaagggctgggtgagatcagcgcagcctccgagttcaagaca
cagccagtccatagccctcctccaccggcatctgctagctcgtctacccctgttccattg
tctccaccagatacaacctggcctcttcctgcccttgcaaccacagaaccagctagagaa
cccagtgcacctaagctcgaagggcagatgggagaggatggaaactctattaaggtgaac
ctgatcaagcaggatgacggcggatcccccatcagacattatctggtcaagtaccgagcg
ctctcctccgagtggaaaccagagatcaggctcccgtctggcagtgaccacgtcatgctg
aagtccctggaatggaatgctgagtatgaggtctacgtggtggctgagaaccagcaagga
aaatccaaggcggctcactttgtgttcaggacctcggcccagcccacagccatcccagcc
aacggcagccccacctcaggcctgagcaccggggccatcgtgggcatcctcattgtcatc
ttcgtcctgctcctggtggtcgtggacatcacctgctacttcctgaacaagtgtggcctg
ttcatgtgtattgcagtcaacctgtgcggaaaagccgggcccggggccaagggcaaggac
atggaggagggcaaggccgccttctcgaaagatgagtccaaggagcccatcgtggaggtt
cgaacagaggaggagcggaccccaaaccatgacggagggaaacacacagagcccaacgag
accacgccactgacggagcccgagctgcctgccgacactacggccactgtcgaggacatg
ctgccttctgtcaccaccgtcaccactaactctgacactatcaccgaaacctttgccact
gctcagaacagccccaccagtgagaccaccaccctgacctccagtattgccccgccggcc
acagccacgcctgactcaaactctgtaccggctggccaggccaccccttccaaggggccc
agcgcctccacctcctccccggccccagctgcagcccccaaggtcgcccccctcgttgac
ctgagcgacaccccgacctcaacccctgccactagcaatttgtcttctagtgtcctggct
aaccaaggggctgtcctcagcccaagcgcccccgctagcgtcggggaggcctctaaggct
cctccagccagcaagccctcccctgcaccagtccccaccccgactggggcagccagttct
ctagcagccgcggctgcccctgccacagaagcccctcaggccaagcaggagtctcccagc
accaaaggcccggacccggagcccacccagcccggagccgtgaagagcccgcccgaggca
gccacagcgcttgctagcccgaagagcgaggctgcctccgtcagcaccacaaacccttcc
cagggcgaggactttaaaatggacgaagggaacttcaagaccccagatattgaccttgca
aaggatgtttttgcagccctgggctctcctgctcccgccgctggggccagtggacaagcc
cctgagcttgctccttccactgcagacagctctgtttcgcctgcgccagcaaagaccgag
aagggccctgtagaagcaaagccagagtgccaggagacagaaacgaagccagcgccagcc
gaagtcaagacggtccccaatgacgccacacagacaaaggagaacgagagcaaagcatga
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integrated database retrieval system
