Callithrix jacchus (white-tufted-ear marmoset): 100398860
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Entry
100398860 CDS
T03264
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X10
KO
K18744
caprin-2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100398860 (CAPRIN2)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100398860 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
100398860
NCBI-ProteinID:
XP_009001934
Ensembl:
ENSCJAG00000001080
LinkDB
All DBs
Position
9:37007463..37055902
Genome browser
AA seq
1046 aa
AA seq
DB search
MKSAKPQVNHSQHGESQRALSPLQSALSSAASPSQAYETYIENGLICLKHKIRNIEKKKL
KLEDYKDRLKSGEQLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSLDLLKAQKKAQRR
EHMLKLEAEKKKLRTILQVQYVLQNLTQEHVQKDFRGGLNGAVYLPSKELDYLIKFSKLT
CPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPK
NAKKKEVPLEEEMLTQSEKNPQLSKAESVKEPESVMEFAQPEIQPQEFLNRRYMTEVDYS
NKQGEEQPWEADYARKPNLPKRWDMLTEPDSQEKKQESFKSWESPGKHQEISKPTVSLEQ
RKQDTSKLRSTLPEEQKKQEISKTKASPSQWKQETPKSKAGRVQEEQKKQETPKPWPVQL
QKELDPKKQTPKPWTPSVQSEQNTTKSWTTPMCEEQDSKQPETPKSWENNVESQKHSLTS
QSQISPKSWGVATASLIPNDQLLPRKFNTEPKDVPKPMHQPVGSSSTLPKDPVLRKEKLQ
DLMTQIQGTCNFMQESVLDFDKPSSAIPSSQPPSATPGSPVASKEQNLSSQSDFLQEPLQ
ATSSPVTCSSNACLVTTDQASSGSETEFMTSETPEAAIPPGKKPSSLASANPSMAKGSEQ
GFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKESPYSPGYNQSFTTASTQT
PPQCQLPAIHVEQTVLSQETAANYHPDGTIQVSNGSLAFYPAQTNVFPRPTQPFVNSRGS
VRGCTRGGRLITNSYRSPGGYKGFDTYRGLPSISNGNYSQLQFQAREYSGSPYSQRDNFQ
QCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPVSNPA
ATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPV
NGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIW
LRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggccaagccccaagtgaaccacagtcagcatggggaaagccaacgggccttg
agccccctgcagtctgctctaagttctgctgcatctccttcccaagcatatgagacctat
attgaaaatggactcatatgccttaaacacaaaattagaaacatcgagaaaaagaagctc
aaactggaagattataaggatcgcctgaaaagtggagagcaacttaatccagaccagttg
gaagcagtagagaaatatgaagaagtgctacataatttggaatttgccaaggagcttcag
aaaaccttttctgggttgagcctagatctactaaaagcgcagaagaaggcccagagaagg
gagcacatgctaaaacttgaggctgagaagaaaaagcttcgaactatacttcaagttcag
tatgtattacagaacttgacacaggaacacgtacaaaaagacttcagagggggtttgaat
ggtgcagtgtatttgccttcaaaagaacttgactacctcattaagttttcaaaactgacc
tgccctgaaagaaatgaaagtctgagtgttgaagaccagatggagcagtcatccttgtac
ttttgggaccttttggaaggtagtgagaaagcagtggtaggaacgacatacaaacacatg
aaagatctactgtctaaattgctcaactcaggctattttgaaagtatcccagttcccaaa
aatgccaagaaaaaagaagtaccactggaggaagaaatgctaacacagtcagaaaaaaac
ccacaattatcgaaggctgaatctgtcaaagagccagagtctgtaatggaatttgcacag
ccagagatacaaccacaagagtttcttaacagacgctatatgacagaagtagattattca
aacaaacaaggcgaagagcaaccttgggaagcagattatgctagaaaaccaaatctcccc
aaacgttgggatatgcttactgaaccagatagtcaggaaaagaaacaggagtccttcaag
tcctgggagtctcctggtaagcaccaggagatatccaagcctacagtttccttagaacag
agaaaacaagacacctcaaaactcaggtctactctgccagaagagcagaagaagcaggag
atatccaaaactaaggcatctcctagccagtggaagcaagaaactcctaaatccaaagca
ggacgtgttcaagaggaacaaaagaagcaggagacaccaaagccatggccggttcagctg
cagaaagaactagatccaaagaagcaaactccaaagccttggacaccttctgtgcagagt
gaacagaacaccaccaagtcatggaccactccaatgtgtgaagaacaggattcaaaacag
ccagagactccaaaatcctgggaaaacaatgttgagagtcaaaaacactctttaacatca
caatcacagatttctccgaagtcctggggagtagctacagcaagcctcataccaaatgac
cagctcctgcccaggaagtttaacacagaacccaaagatgtgcctaagcctatgcatcag
cctgtaggttcttcctctacccttccgaaggatccagtattgaggaaagaaaaactgcag
gatctgatgactcagattcaaggaacttgtaactttatgcaagagtctgttctggacttt
gacaaaccttcaagtgcaattccatcgtcacaaccgccttcagctactccaggtagcccc
gtagcatctaaagaacaaaatttgtccagtcaaagtgattttcttcaagagccattacag
gctacttcttctccagttacttgtagctcaaatgcttgcttggttactaccgatcaggct
tcttctggatctgaaacagagtttatgacctcagagactcctgaggcagcaattccccca
ggcaagaaaccgtcttcactagcttctgcaaatccttccatggcaaagggctctgaacag
ggcttccagtcacctccagcaagtagtagttcagtaaccattaacacagcaccctttcaa
gccatgcagacagtatttaatgttaatgcacctctgcctccacgaaaagaacaagaaata
aaagaatctccttattcacctggctacaatcaaagttttactacagcaagtacacagaca
ccaccccagtgccaactgccagctatacatgtagaacaaactgttctttctcaagagact
gcagcaaattatcatcctgatggaactattcaagtaagcaatggtagccttgccttttac
ccagcacagacgaatgtatttcccagacctacccagccatttgtcaatagccggggatct
gttagaggatgtactcgtggtgggagattaataaccaattcctatcggtctcctggtggt
tataaaggttttgatacttatagaggactcccttccatttccaacggaaattatagccag
ctgcagttccaagctagagagtattctggatcaccttattcccaaagggataatttccag
cagtgctataagcgaggagggacatctggtggtccacgagcaaattcaagagcagggtgg
agtgattcttctcaggtgagcagcccagaaagagacaacgaaacctttaacagtggtgac
tctggacaaggagactcccgtagcatgacccctgtggatgtgccagtgtcaaatccagca
gccaccatactgccagtacatgtctaccccctgcctcagcagatgcgagttgccttctca
gcagccagaacctctaatctggcccctggaactttagaccaacctattgtgtttgatctt
cttctgaacaacttaggagaaacttttgatcttcagcttggtagatttaattgcccggtg
aatggcacttatgttttcatttttcacatgttaaagctggcagtgaatgtgccactgtat
gtcaacctcatgaagaatgaagaggtcttggtatcagcctatgccaatgatggtgctcca
gaccatgaaactgctagcaatcatgcaattcttcagctcttccagggagaccagatatgg
ttacgtctgcacaggggagcaatttatggaagtagctggaaatactctacgttttcaggc
tatcttctttatcaagattga
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