Callithrix jacchus (white-tufted-ear marmoset): 100399212
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Entry
100399212 CDS
T03264
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100399212 (CLSTN1)
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Cadherin related
100399212 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
EphA2_TM
Glyco_hydro_16
Toxin_R_bind_N
V_ATPase_I
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
100399212
NCBI-ProteinID:
XP_035163541
Ensembl:
ENSCJAG00000000470
UniProt:
U3FGM7
LinkDB
All DBs
Position
7:complement(44680165..44785579)
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AA seq
981 aa
AA seq
DB search
MLRRPAPALAPAARLLLVGLLCGGGVWAGRVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDAPLHFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCEL
QKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYD
SILRVEAMDADCSPQFSQICSYEIVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRATEDVLVKISVKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLETCDEPVASVQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGAASGTAELLPSPSGSLNWTVGLPTDNGHDSD
QVFEFNGTQAVRIPDGVVSVSPREPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLVFLLRQEPSEDKKYRPAEFHWKLNQVCDEEWHHYALSVEFPSVTLYVDGTSHE
PFSVTEDYPLHPSKIETQLVVGACWQEFSGVESDNETEPVTVASAGGDLHMTQFFRGNLA
GLTLRSGKLADKKVIDCLYTCKEGLDLQVPEDSSRGVQIQAHPSQLVLTLEGEDIGALDK
TMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATCMSVPPVDGYVMVLQPEEPKISLSGV
HHFARAASEFESSDGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHDLDTC
EVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRYRNW
HARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPLEHANHMAAQPQFVHPEHRSFV
DLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQ
GDPQNVNRQQQLEWDDSTLSY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccccgcgcccgcgctggccccggccgcccggttgctgctggtcgggctg
ctgtgcggcggcggggtctgggccgggcgagttaacaagcacaagccctggttggagcct
acctaccacggcatagtcacagagaacgacaacacggtgctcctggaccccccgctcatt
gccctggacaaagatgcacctctgcattttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcacgggcagaatgtcccctttgatgcagtagta
gtggataaatccactggtgagggagtcattcgctccaaagagaaactggactgtgagcta
cagaaggactactcattcaccatccaggcctatgactgtgggaagggacccgacggcacc
aacgtgaaaaagtctcataaagcaactgtccatattcaggtgaacgatgtgaatgagtac
gcgcccgtgttcaaggagaagtcctacaaagccacggtcatcgaggggaagcagtacgac
agcattttgagggtggaggccatggatgctgactgctcccctcagttcagccagatctgc
agctatgaaatcgtcactccagacgtgcccttcactgtcgacaaagatggttatataaaa
aacacagagaagttaaactatggaaaagagcatcagtataagctgactgtcactgcctac
gactgtgggaagaaaagagccacagaagatgttttggtgaagatcagcgtgaagcccacc
tgcaccccagggtggcaaggctggaacaacaggattgagtatgagccgggcacaggcgcg
ttggccgtctttccaaacatccacctggagacatgtgatgagccagtcgcctcagtacag
gccacggtggagctagaaaccagccacatagggaaaggctgcgaccgagacacctactca
gagaagtccctccaccggctctgtggtgcggcctcgggcactgccgagctgctgccatcc
ccgagcggctccctgaactggaccgtgggcctccccactgacaacggccacgacagcgac
caggtgtttgagttcaacggcacccaggcagtgaggatcccagacggcgtcgtgtcggtc
agccccagagagccattcaccatttccgtgtggatgaggcatgggcctttcggcaggaag
aaggaaacgatactttgcagttctgacaaaacagatatgaatcggcaccactactcactg
tatgtccacgggtgccggctggtcttcctcctccgccaggagccttcggaggacaagaaa
tacagacctgcagaattccactggaagctgaatcaggtctgtgatgaggaatggcaccac
tacgccctcagtgtggaattccccagcgttactctctatgtggatggcacgtcccacgag
cccttctctgtgactgaagattatccactccatccatccaagatagaaactcagctcgtg
gtgggggcttgctggcaagagttttcaggagtcgaaagtgacaatgaaactgagcctgtg
actgtggcctctgcaggtggcgacctgcacatgacccagtttttcagaggcaatctggct
ggcctaactctccgttccgggaaactcgcagataagaaggtgatcgactgtctgtatacc
tgcaaggaggggcttgacctgcaggtccctgaagacagcagcagaggcgtacagatccaa
gcacaccccagtcagttggtgttgaccttggagggagaggacattggggcattggataag
accatgcagcacatctcctacctgaactcgcggcagttccccacgcccggaattcgcagg
ctcaaaatcaccagcacaatcaagtgttttaatgaggccacctgcatgtcagtcccccca
gtagatggctacgtgatggttttacagcctgaggagcccaagatcagcttgagcggtgtc
caccattttgcccgagcagcttctgaatttgaaagctcagacggggtgttccttttccct
gagcttcgcatcatcagcaccatcacgagagaagtggagcctgaaggggacggggctgag
gaccccacagttcaagaatcactagtgtccgaggagatcgtgcacgacctggatacctgc
gaggtaacggtggagggagaggagctgaaccacgagcaggagagcctggaggtagacatg
gcccgcctgcagcagaagggcatcgaagtgagcagctcagagctgggcatgaccttcaca
ggcgtggacactatggccagctacgaggaggttttgcacctccttcgctatcggaactgg
catgccaggtccttgcttgaccggaagttcaagctcatctgctcagagctgaatggccgc
tacatcagcaacgaatttaaggtggaggtgaatgtaatccacacggcaaaccccttggaa
cacgccaaccacatggctgcccagccccagttcgttcacccggaacaccgctcctttgtt
gacctgtcaggccacaacctggccaacccccacccgtttgcagttgtccccagcacggcg
accgtggtgattgtggtgtgtgtcagcttcctggtgttcatgatcatcctgggggtcttt
cggatccgggctgcacatcagcggaccatgcgggaccaggacaccgggaaggagaacgag
atggactgggacgactccgccctgaccatcaccgtcaaccccatggagacatacgaggac
cagcacagcagtgaggaggaagaggaggaggaggaggaagaggagagcgaagacggtgag
gaagaagatgacatcaccagtgcagagtcggagagcagtgaggaggaggagggggagcag
ggtgacccccagaacgtgaaccggcagcagcagctggagtgggacgactccaccctcagc
tactga
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