| Entry |
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| Symbol |
MTREX
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| Name |
(RefSeq) exosome RNA helicase MTR4
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| KO |
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| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100399268 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cjc03019]
100399268 (MTREX)
03041 Spliceosome [BR:cjc03041]
100399268 (MTREX)
03009 Ribosome biogenesis [BR:cjc03009]
100399268 (MTREX)
03016 Transfer RNA biogenesis [BR:cjc03016]
100399268 (MTREX)
Enzymes [BR:cjc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100399268 (MTREX)
Messenger RNA biogenesis [BR:cjc03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
100399268 (MTREX)
Spliceosome [BR:cjc03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100399268 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
100399268 (MTREX)
Ribosome biogenesis [BR:cjc03009]
Eukaryotic type
Pre-60S particles
Helicases
100399268 (MTREX)
Transfer RNA biogenesis [BR:cjc03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
100399268 (MTREX)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(151240424..151351900)
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| AA seq |
1042 aa
MADAFGDELFSVFEGDSTTTEGTKKDKEKEKGKWKGPPGSADKAGKRFDGKLPSESTNNG
NNKRDADFEGTDEPIFGKKPRIEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADE
DYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALR
EKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGS
EVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLH
KQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGD
QKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMV
EEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALF
ATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVD
EKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPG
VVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLV
KVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKP
DEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPI
DDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELK
KARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDL
SAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLS
SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE
NKFAEGITKIKRDIVFAASLYL |
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| NT seq |
3129 nt +upstreamnt +downstreamnt
atggcggacgcattcggagatgagctgttcagcgtgttcgagggcgattcgaccactacg
gagggaaccaaaaaagacaaggaaaaggagaaagggaagtggaaggggcctccagggtct
gcagacaaggcagggaaacgttttgatggtaaattaccatcggaatcaactaataatgga
aacaataagagagatgcagatttcgaaggtacagatgagcccatttttggaaagaagccc
aggatagaagaatcaataactgaagacttaagtttggcagacctgatgcctagagtcaag
gtacaatcagttgaaactgttgaaggttgtacacatgaggttgcacttcctgcagatgaa
gattatttaccacttaaacctcgagttggaaaagctgctaaggaatacccattcattctt
gatgcttttcaaagagaagccattcagtgtgttgacaataatcagtctgttctagtatct
gcacatacatcagcaggaaaaacagtatgcgctgagtatgccattgcattggctttaagg
gaaaaacagcgtgtaatatttaccagcccaattaaggctcttagtaaccagaaataccgt
gaaatgtatgaagaatttcaagatgttggtctgatgactggtgatgttactattaatcct
acagcatcttgtcttgttatgaccacagagattttgagaagtatgctgtacagaggttct
gaagttatgcgagaagttgcttgggttatatttgatgaaattcattacatgagagattca
gaacgtggtgtagtatgggaagaaactattattttgcttcctgataacgtccactatgtc
tttctttcggctactattccaaatgcccgacagtttgctgaatggatttgccatttacat
aaacagccttgtcatgtaatttacacagattatcggcccactccattgcaacactacatt
tttccagcagggggagatggcctgcatcttgtggttgatgaaaatggtgacttcagggaa
gataattttaatactgcaatgcaagtgcttcgagatgcaggtgatttggccaaaggagac
cagaaagggcggaaaggaggaacaaaaggaccatcaaatgtgttcaaaattgtgaagatg
attatggaaagaaatttccaacctgtgattattttcagttttagtaagaaagattgtgaa
gcctatgcacttcagatgaccaaattagatttcaacacagatgaagaaaagaagatggtt
gaagaagtattcagtaatgcaattgattgcttatccgatgaagataaaaaactccctcag
gtagaacatgtacttcctcttttgaagagggggattggtattcaccatggtggtttactt
cctattttgaaagaaactatagaaattctcttttctgaaggattgataaaggcattattt
gccacggagacctttgctatgggaattaacatgccagctagaactgttttatttacaaat
gcccgcaaatttgatgggaaggattttcgatggatttcttctggtgaatacattcagatg
tctggtcgtgctggaaggagaggaatggatgatagaggaattgtaattcttatggtagat
gaaaagatgagcccaacaattggaaaacaattacttaagggctccgctgatcctctaaat
agtgctttccatttgacttacaacatggttttgaacttactgcgcgtagaagaaattaat
ccggagtacatgttggaaaaatccttctaccagtttcagcattacagagcaattccagga
gtagtagagaaggtaaagaactcagaagaacagtataataaaatagtaattcccaatgaa
gaaagtgtagttatctattataagattagacaacagcttgccaaattgggtaaagaaatt
gaagaatatattcacaaaccaaaatactgcttaccttttctacaaccaggtcgtttggta
aaggtaaagaatgaaggagatgactttggctggggagtagtggtgaatttctcaaaaaag
tcaaatgttaagcctaactctggtgaactggatcctttgtatgtagtggaagtacttctg
cgctgtagcaaagagagcttgaaaaattcagctacagaagctgcaaaaccagctaaacct
gatgagaaaggagagatgcaggttgtcccagttttggtgcatctcctgtctgctatcagc
agcgttagactttacattcctaaagatcttcggccagtggacaatagacagagtgtttta
aaatcaatacaggaagttcagaaacgttttcctgatggcgtccccttattagatcctatt
gatgatatgggcattcaagatcaagggctgaaaaaagtcattcagaaagtagaagctttt
gagcatcgaatgtattctcatccacttcacaatgatccaaatttggaaactgtgtataca
ctttgtgaaaaaaaagcacagattgcaatagatattaaatctgcaaagcgagaactgaag
aaagcaagaacagttctacaaatggatgaactcaaatgtcgcaaacgtgttttaagaagg
ttgggatttgctacttcttctgatgtaatagagatgaaaggacgagtggcttgtgagata
agcagtgctgatgagctccttctaactgagatgatgtttaatggccttttcaatgacctt
tctgcagaacaggcaacagcattattaagctgctttgtatttcaagagaactctagtgaa
atgcccaaattaacagaacaattagcaggaccacttcgtcaaatgcaggaatgtgctaaa
agaattgcaaaagtttctgcagaagccaaattggaaattgatgaggaaacttatctaagc
tcatttaaacctcacttaatggatgtagtatacacctgggcaactggagctacatttgcc
catatctgcaaaatgacagatgtctttgaaggcagcataattcgttgtatgaggcgcctg
gaagaactgcttcgacaaatgtgtcaagcagcaaaagccattggaaacactgagctggaa
aataaatttgcagaaggaatcaccaaaatcaagagagatattgtgtttgctgccagcctc
tacttgtag |
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