KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100399389
Entry
100399389         CDS       T03264                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013  Nucleocytoplasmic transport
cjc03015  mRNA surveillance pathway
cjc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100399389 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100399389 (RBM8A)
   03015 mRNA surveillance pathway
    100399389 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100399389 (RBM8A)
   03041 Spliceosome [BR:cjc03041]
    100399389 (RBM8A)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100399389 (RBM8A)
Spliceosome [BR:cjc03041]
 Complex C
  Other components
   EJC/TREX
    100399389 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 100399389
NCBI-ProteinID: XP_002759858
Ensembl: ENSCJAG00000002209
UniProt: F7DRZ4
LinkDB
Position
18:complement(1205292..1207324)
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgctagatcttcacgaggccgggggcgaagatttcgccatggatgaggat
ggggacgagagcattcacaaactaaaagaaaaagcgaagaaacggaagggccgcggcttt
ggctccgaagaggggtcccgagcgcggatgcgtgaggattatgacagcgtggagcaggat
ggcgatgaacccgggccacaacgctctgttgaaggctggattctctttgttactggagtc
cacgaggaagccactgaagaagatatacacgacaaattcgcagaatatggggaaattaaa
aacattcacctcaacctcgacaggcgaacaggatatctgaaggggtatactctagttgag
tatgaaacatacaaggaggcccaggctgctatggagggactcaatggccaggatttgatg
ggacagccaatcagtgttgactggtgttttgttcggggtccaccaaaaggcaagaggaga
ggtggccgaagacgcagcagaagtccagaccggagacgtcgctga

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