Entry |
|
Symbol |
HOXA1
|
Name |
(RefSeq) homeobox protein Hox-A1 isoform X1
|
KO |
K09301 | homeobox protein HoxA/B/D1 |
|
Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
|
Pathway |
cjc04550 | Signaling pathways regulating pluripotency of stem cells |
|
Brite |
KEGG Orthology (KO) [BR:cjc00001]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100399459 (HOXA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:cjc03000]
100399459 (HOXA1)
Transcription factors [BR:cjc03000]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100399459 (HOXA1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:28307315..28310107
|
AA seq |
326 aa
MDNARMNSFLEYPILSSGDSGTCSARAYPSDHGITTFQSCAVSANSCGGDDRFLVGRGVQ
IGSPHHHHHHHHHPQPATYQTSGNLGVSYSHSSCGPSYGSQNFSAPYSPYALNQEADVSG
GYPQCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATYNNSLS
PLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQL
TELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPATPP
GNEEKAEESSEKSSSSPCVPSPGSST |
NT seq |
981 nt +upstreamnt +downstreamnt
atggacaatgcaagaatgaactccttcctggaataccccatcctcagcagtggcgactcg
gggacctgctcagcgcgagcctacccctcggaccacgggattacaactttccagtcgtgc
gcggtcagtgccaacagctgcggcggcgacgaccgcttcctagtgggcaggggggtacag
atcggttcgccccaccaccaccaccaccaccatcaccacccccagccggctacctaccag
acttccgggaacctgggggtgtcctactcccactcgagttgtggtccaagctatggctca
cagaacttcagtgcgccttacagtccctatgcgttaaatcaggaagcagacgtaagtggt
gggtacccccagtgcgcgcccgctgtttactctggaaatctctcatctcccatggtccag
catcaccaccaccaccagggttatgctgggggcgcggtgggctcgcctcaatatattcac
cactcatatggacaagagcaccagagcctggccctggctacgtataataactccttgtcc
cctctccacgccagccaccaagaagcctgtcgctcccctgcatcagagacatcttctcca
gcgcagacctttgactggatgaaagtcaaaagaaaccctcccaaaacagggaaagttgga
gagtacggctacctgggccaacccaacgcggtgcgcacgaacttcactaccaagcagctc
acggagctggagaaagagttccacttcaacaagtatctgacgcgcgcccgcagggtggag
atcgctgcctccctgcagctcaacgagacccaagtgaagatctggttccagaaccgccga
atgaagcaaaagaaacgggagaaggagggtctcttgcccatctctccagccaccccacca
ggaaacgaggagaaggccgaggaatcctcggagaagtccagctcttcgccctgcgttcct
tccccggggtcttctacttaa |