Callithrix jacchus (white-tufted-ear marmoset): 100399527
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Entry
100399527 CDS
T03264
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100399527 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100399527 (SMARCAD1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100399527 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
Pox_D5
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
100399527
NCBI-ProteinID:
XP_002745629
Ensembl:
ENSCJAG00000006778
UniProt:
A0A5K1UF91
LinkDB
All DBs
Position
3:complement(99402694..99486049)
Genome browser
AA seq
1025 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDIT
EKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSDDVVSPNCSNTVQEKTFNKDTV
IIVSEPSEDEESQGLPTTARRNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLKLI
ESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNE
SAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQYA
SQSEVPNGKEVSSRSQNYPKNPTKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEYD
SGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPF
NSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGG
GWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQ
EGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIV
TTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQ
NNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILR
RVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKM
ANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHIN
NFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLD
GKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAED
RCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLLK
TSMGL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaaggaataagattgaggaagca
cccgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaaacactcctgattcagatataact
gaaaaaacagaagattctagtgttccagaaactccagataatgaaagaaaagcaagtata
tcatatttcaaaaatcaaagaggaatacagtatattgatttgtcttctgatagtgacgat
gttgtttccccaaattgctccaatacagttcaagagaaaacgttcaacaaagatacagtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccacagcacgt
agaaatgatatttcagaattggaagacctttcagaattggaagatcttaaagatgctaaa
cttcagactttgaaggaactttttccacaaagaagtgacagtgatttacttaagttgatt
gaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggtgatgca
ggtggtgggcccaggaaaagaaaattatcttcttcttcagagccatatgaggaagatgaa
tttaatgatgatcaatctataaaaaagacaagactggatcatggagaagaatcaaatgag
tctgcagaatctagcagtaattgggaaaagcaggaaagtattgtattgaaattgcaaaag
gagtttcccaattttgataaacaggaactaagagaagtgctcaaggaacatgaatggatg
tacacagaagctttagaatctttaaaagtgtttgcagaagaccaagatatgcaatatgca
tcacaaagtgaggttccaaatggaaaagaagtttcttcaagaagtcaaaattatcctaaa
aatccaactaaaacaaaactaaaacagaaattttcaatgaaagcacaaaatggctttaac
aagaaacgtaaaaaaaatgtatttaatccaaagagagttgttgaagactctgaatatgat
tcaggttctgatgtcggtagttcactagatgaggactatagtagtggtgaagaagtgatg
gaggatgggtataaaggtaaaattcttcacttccttcaagatgcttcaattggtgaactt
actttgattcctcaatgttctcagaaaaaggctcagaagataacagaactccggcccttt
aatagttgggaagctctgttcacaaagatgtccaaaactaatggcttatcagaagatttg
atatggcactgtaaaacactgatccaagaaagagatgtagttataaggcttatgaacaaa
tgtgaagacatttcaaataaattgaccaaacaagttaccatgcttactggaaatggaggt
ggatggaacattgaacaaccttccattctaaaccaaagtttgtcactcaagccctatcag
aaggttggtttgaattggctggcattggtacataaacatggacttaatggaattttggca
gatgaaatgggcctaggaaaaactattcaagccattgcatttctggcatacctctatcag
gagggtaataatggtcctcatttgatcgttgttccagcttcaactatagataactggtta
agagaagttaatttatggtgccctactttgaaggtgctctgttactatggttctcaagag
gaacgtaaacaaattagatttaacattcatagtagatatgaagattacaatgtaattgtg
accacatacaactgtgccatcagcagttctgatgaccgtagtctgtttcgacggctgaaa
cttaattacgcaatttttgatgagggccatatgctgaagaatatgggctccattcgctac
cagcaccttatgacaattaatgcaaataaccgtttgctgctcacgggcacacctgtacag
aataatctgttagaactcatgtcgctgttgaattttgttatgccacacatgtttagtagt
agcaccagtgaaatacgaagaatgttttcctctaagacgaaatcagcagatgagcaaagt
atatatgaaaaggagagaatagcacatgcaaaacaaattataaagccatttattctcaga
agagtaaaagaagaggttctcaagcagttacctcccaagaaagatcaaattgagttgtgt
gcaatgtcagagaagcaggagcaactctatttgggtcttttcaacagattgaaaaaatct
atcaataacttggagaaaaacacagaaatgtgcaatgtcatgatgcagttgaggaaaatg
gccaatcatcctttattacatcgccaatattacacagctgaaaaactcaaggaaatgtct
cagcttatgctaaaggaacctacacattgtgaggctaaccctgacttgatctttgaagat
atggaagttatgacagactttgaactacatgtactttgtaaacagtatcgacacattaat
aactttcagttagacatggatttgattttagattctggaaaattccgagttttaggatgc
atcttgtctgaattgaaacagaagggtgatagagttgtgttatttagccaatttaccatg
atgctggatatcttagaggttctcttaaaacatcatcagcataggtacctcagattagat
ggaaagactcagatttctgaaaggattcatctaattgatgaatttaataccgatatggat
atctttgtgtttctgctatcaacaaaagctggtggattaggaataaatctgacttcagca
aatgttgttatacttcatgatattgactgtaatccttacaatgacaaacaagcagaagat
agatgccatagagtaggccagactaaagaagtactagttataaaactaataagtcaaggg
acgattgaagaatccatgctaaaaattaaccaacagaaactgaaactagaacaagatatg
accactgtagatgaaggtgatgaagggagtatgccagcagatatagccacattactaaaa
acatcaatgggcctgtga
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