Callithrix jacchus (white-tufted-ear marmoset): 100399568
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Entry
100399568 CDS
T03264
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100399568 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100399568 (EFL1)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
Pre-60S particles
GTPases
100399568 (EFL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
EFG_IV
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100399568
NCBI-ProteinID:
XP_002749232
Ensembl:
ENSCJAG00000015607
UniProt:
U3FRS3
F6W5W8
LinkDB
All DBs
Position
6:23706858..23829175
Genome browser
AA seq
1120 aa
AA seq
DB search
MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQVRGITMKSSAISLHYATGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILGQINALTGTL
FTSKVLEERAEKETESQVNPNSEQGKQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDG
WGFGIEHFARIYSQKIGIKKEVLLKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILEN
IWSLYDAVLKKDKEKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVC
QKLPSPLDITAERVERLMCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIIFVSKMFAV
DAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSALETCPKGDEP
RGDEQQVESMTLKPVPQEENNQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPL
GFSAPPDDLPPVPHMAYCALENLYLLMGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCS
LPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLV
TAGEVHLQRCLDDLKERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQ
TKEDQSKIPEGIQVDSDGLITITTPNKFAMLSVRAMPLPEEVTQILEENSDLIRSMEQLT
SSLSEGENTQMIYQKTQEKILEFRGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKS
EDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLS
KFEEQGASDLAKEGQEENGTCSGGNENQELQDGCSEALEKRTSQKGDSALTDCYGPFSGQ
LIATMKEACRYALQVKPQRLMAAMYTCEIMATGDVLGRVYAVLSKREGRVLQEEMKEGTD
MFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEK
ADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaacagcttggataagatgattcaactccagaaaaacactgccaacatcagg
aatatttgtgttttggctcatgttgaccatggaaaaactactctggctgactgtcttata
tctagcaatggaatcatctccagccgtctagcaggcaagttaaggtacatggacagcaga
gaagatgaacaggttcgagggatcactatgaaatctagtgccatttcactacattatgca
acaggtaatgaggagtacctgattaatctgatagactctccgggacatgtggacttttcc
tcagaagtatcaaccgccgttcgcatttgtgatgggtgcatcattgtggtagatgccgtg
gaaggagtctgtcctcagacacaggccgttctgcgacaagcttggcttgaaaacatccgt
ccagttttagtgattaataagatagatcgcttgatagtggaactgaaattcaccccacaa
gaggcctattctcacctcaagaatattttaggacagattaatgcactcacaggaactctt
tttacttctaaagtcctagaagaaagagcagagaaagagactgaatcccaagtgaatcca
aattctgaacaaggaaagcaagtatatgactggagcactggcttggaggacacagatgat
tctcacctttacttctctccagaacagggaaatgtggtgtttaccagtgcaatagatgga
tggggctttggaattgagcactttgccagaatctacagtcaaaaaattggcatcaaaaag
gaagttcttttgaaaaccttgtggggagattactatataaacatgaaggctaaaaagatt
atgaagggtgatcaggccaaaggaaagaaacctttatttgtacagttgatcctggaaaat
atatggagtttgtatgatgctgtcttgaaaaaggacaaagaaaaaattgataaaatagtg
acttctttaggattaaaaattggagcccgggaggcacgccattcagaccctaaagttcag
atcaatgccatttgcagtcagtggctacccatctcccatgctgttcttgctatggtgtgt
cagaaacttcctagtccccttgatatcacggctgagagagtggagagactgatgtgcaca
ggatcgcaaacatttgactctcttccaccagaaactcaagcactgaaagcagcttttatg
aaatgtggaagtgaggacactgctccagttattatatttgtttccaaaatgtttgcagtt
gatgctaaggccctccctcagaataagccaaggcctctcactcaagaagaaattgctcag
agacgtgagcgtgcaagacaaaggcatgcagagaagcttgcagcagcgcagggacaggca
cccttggagcccacccaagatgggagtgcccttgaaacatgtccaaaaggagatgagcca
agaggtgacgagcaacaggtggaaagtatgacccttaaacccgtgccccaggaagaaaac
aaccaagagtcttttattgcatttgctcgagtgttcagtggtgtggctcgaagaggaaag
aaaatttttgtcttggggcccaaatacagtcctctagagtttttacgaagggtaccatta
ggcttctcagctccacccgatgacctccccccagtcccgcacatggcatactgtgctctg
gaaaacctgtatcttctgatgggaagagaactggaatatctagaggaggtacctccagga
aatgtgctaggaataggaggccttcaagattttgtgctgaaatctgcaacactgtgtagc
ctgccatcctgcccaccatttataccactcaacttcgaagccacgcctattgtgagagtt
gctgttgaaccgaaacatccaagtgaaatgcctcagctcgtaaaaggaatgaaactgtta
aaccaggctgatccctgtgtccagattttaattcaggaaacgggagagcacgttttagtc
acggcaggagaagttcaccttcagcgatgcctggatgacttaaaagaaaggtttgcaaag
attcatatcagtgtatctgaacccattattccattcagagaaacaatcacaaaaccccca
aaggttgacatggtcaatgaagaaataggcaaacagcaaaaagttgcagtcatacaccaa
acaaaagaagatcaaagtaaaatccctgagggaatccaagttgactctgacgggctgatc
accataacaactcccaataaatttgccatgctcagtgttcgagccatgccccttccagaa
gaagtcactcagattctggaagaaaatagtgatttgattcgttctatggagcagttgaca
tcctctttgagtgagggtgaaaatactcagatgatttatcaaaagacccaagagaaaatt
ttggaattcagaggaaaactggagcaacacctaacagggagaagatggaggaatattgtt
gaccaaatctggtcattcggcccaagaaaatgtgggcccaacatactagtcaataaaagt
gaagattttcagaactcagtatggacaggtccagctgacaaagcttcaaaagaagccagt
agataccgagatttgggcaatagcattgtgagtggcttccaactagcaaccctctctggc
cccatgtgtgaggagcctctcatgggtgtctgttttgttctggaaaaatgggacctaagt
aaatttgaggaacaaggagcaagtgatctggccaaagagggacaggaggaaaatggaacc
tgttctgggggaaatgaaaaccaagagctacaagatggctgctctgaggccttggagaag
aggacatcccagaaaggagactctgcactcactgactgctatggacccttctcaggacag
ctaattgccaccatgaaagaagcatgtcgctatgcactgcaagtgaaacctcagcgcctg
atggcagctatgtacacatgtgagatcatggccaccggtgacgttctcggtcgagtctat
gctgtcttgtcaaagagagaaggtcgggtacttcaagaagaaatgaaagaagggacagac
atgttcattattaaggctgtgctgcctgttgctgaaagctttggttttgctgatgaaatc
aggaagaggacaagtggcctggccagcccgcaactggtattcagccattgggagatcatt
cccagcgaccccttctgggtgccaaccacggaggaggagtacctgcattttggggaaaag
gctgactctgagaaccaggcccggaagtacatgaacgcagttcgaaagcggaagggtctg
tatgtggaagaaaagattgtggagcatgcagaaaagcagaggacactcagcaaaaataag
tag
DBGET
integrated database retrieval system
