Callithrix jacchus (white-tufted-ear marmoset): 100399692
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Entry
100399692 CDS
T03264
Symbol
LRRC7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100399692 (LRRC7)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
100399692 (LRRC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
PDZ_6
LRR_13
LRR_NXF1-5
LRR_EndoS
LRR_5
Motif
Other DBs
NCBI-GeneID:
100399692
NCBI-ProteinID:
XP_017830321
LinkDB
All DBs
Position
7:103886406..104501537
Genome browser
AA seq
1594 aa
AA seq
DB search
MQDVFWILRGRREGSTLALRMENLIRGRNPPQYQRSPCKEVRAALRKRPEEELQCLEMTT
KRKIIGRLVPCRCFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPK
QLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEAS
VNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKL
AQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIE
TVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEE
FDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEE
IGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLT
NYMFPQQPRGDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKKEDDENAGKVKDLSCQA
PWERGQRGITLQPARLSGDCCTPWARCDQQIQDMPVPQNDPQLAWGCISGLQQERSMCTP
LPVAAQSTTLPSLSGRQVEINLKRYPTPYPEDLKNMVKSVQNLVGKPSHGVRVENSNPTA
NTEQTVKEKYEHKWPVAPKEITVEDSFVHPANELRIGELHPSLAETPLYPPKLVLLGKDK
KESTDESEVDKTHCLNNSVSSGTYSDYSPSQASSGSSNTRVKVGSLQTTAKDAVHNSLWG
NRIAPSFPQPLDAKPLLSQREAVPPGNIPQRPDRLPMSDAFTDNWTDGSHYDNTGFVAEE
ATAENANSNPLLSSKSRSTSSHGRRPLIRQDRIVGVPLELEQSTHRHTPETEVPPSNPWQ
NWTRTPSPFEDRTAFPSKLETTPTTSPLPERKEHIKESTEIPSPFSPGVPWEYHDSNPNR
SLSNVFSQIHCRPESSKGVISISKSTERLSPLMKDIKSNKFKKSQSIDEIDIGTYKVYNI
PLENYATGSDHLGSHERPDKMLGPEHGMSSMSRSQSVPMLDDEMLTYGSSKGPQQQKAPM
TKKVYQFDQSFNPQGSVEVKAEKRIPPPFQHNPEYMQQASKDIAKDLISPRAYRGYPPME
QIFSFSQPSVNEDAVVNAQFASQGARAGFLRRADSLVSATEMAMFRRVNEPHELPPTDRY
GRPPYRGGLDRQSSVTVTESQFLKRNGRYEDEHPSYQEVKAQAGSFPVKNLTQRRPLSAR
SYSTESYGASQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDLKTRPTPVKGEESC
GKMPADWRQQLLRHIEARRLDRNAAYKHNTVNLGMLPYGGISAMHAGRSMTLNLQTKSKF
DHQELPLHKTPSQQSNILDNGQEDISPSGQWNPYPLGRRDVPPDTITKKAGSHIQTLMGS
QSLQHRSREQQPYEGNINKVTIQQFQSPLPIQIPSSQATRGPQPGRCLIQTKGQRSMDGY
PEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPASNLLQPGDKILQA
NGHSFVHMEHEKAVLLLKSFQNTVDLVIQRELTV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgtgttttggatcctacgtggaaggagggagggaagcacattagcattaagg
atggagaacctaataaggggaaggaatcccccacaataccagagaagtccttgtaaagag
gttcgtgcagcacttcggaagaggcctgaagaggagttgcagtgcctggagatgaccacc
aaacggaaaatcatcggccgtcttgtgccgtgcagatgtttccgaggtgaagaagaaatc
atttcagttttagattactcccactgcagtcttcagcaggtgccaaaggaggtctttaac
ttcgaacgaacattagaggagctttatctagatgccaatcaaattgaagaactacccaag
caattgttcaactgtcaagctctacgaaaactaagtattcctgataatgacctttcaaat
ctgccaaccactattgctagtttagttaatcttaaagaactcgacatcagtaaaaatggt
gtacaagaatttccagaaaacataaagtgctgtaagtgtttaacaattattgaagccagt
gtcaatcccatttctaaacttcctgatggcttcacacagctcctaaacctgacccagctc
tacctgaatgacgcctttcttgaatttcttccagccaattttggaagacttgtcaaattg
cggatcttggagttaagagaaaatcacttgaaaactctaccaaagtcaatgcacaaactg
gcccagttggaaagacttgacctaggcaataatgaattcagtgagctgcctgaagttctg
gatcaaatacaaaatttgagggagttatggatggataataatgcattacaagtgctacct
gggtctatagggaagttaaagatgttggtatacctggatatgtccaaaaacagaatagaa
acagttgacatggatatttctggatgtgaagcccttgaggacctcttattgtcatccaat
atgttgcaacaattgcctgactctataggacttttgaaaaaactaactactctaaaagta
gatgacaatcaacttacgatactacccaatacaatcggaaatttatctttattagaagaa
tttgactgtagctgtaatgaactggagtcactaccttctaccattggctaccttcatagt
cttcgaacattagcagttgatgagaatttccttccagaattacccagagaaattggaagt
tgtaagaatgttacagtcatgtctctacgctccaacaaattagaatttcttcctgaagag
attggacagatgcagaaacttagagtcctaaatttgagtgacaacagattgaagaattta
ccattctcatttaccaaacttaaagagcttgcagctttgtggctttctgacaatcagtcc
aaagcccttatccctttacaaacagaagcccatccagaaacaaagcaaagggtattgact
aactacatgtttccccagcagcctcgtggtgatgaagatttccagtcagacagtgacagc
tttaaccctacactgtgggaagaacagagacaacaacgcatgactgtagcctttgaattt
gaagacaaaaaggaagacgacgaaaatgctgggaaagttaaggatctctcctgccaagcc
ccctgggaaaggggccagcgtgggattactctccaacctgccagactgtctggcgattgc
tgcacaccatgggccaggtgtgatcagcagatccaagatatgcccgtcccccagaatgac
ccacagctggcatggggttgtataagtggcctccagcaggaaaggagcatgtgtactcca
ttgccagttgcagcacaatccaccactcttccctctctaagtggcagacaggttgaaata
aacctaaaacgatatccaactccttacccagaggatttaaagaatatggtaaaatctgtt
caaaatctggtgggtaagccaagccatggagtgcgtgttgagaattcaaatccaactgct
aacacggagcaaactgtgaaagaaaaatatgaacacaagtggccggtagccccaaaggag
attacagtggaggattcttttgttcatccagctaatgaattgaggattggggaacttcac
ccttcattagctgagacccctctgtacccacccaaacttgttctgctagggaaggacaaa
aaagaatcaactgatgagtctgaagttgacaaaactcactgtctgaataacagtgtttcc
tcaggcacttactcagactactcgccttcccaggcttcctcaggatcctctaacacccgg
gttaaagtggggtccttgcagacaacagctaaagatgcagtacataattctttgtggggt
aacaggattgcaccatctttcccacaacctcttgatgcaaagccattactcagtcagcga
gaggctgttcccccagggaatataccacagcgtcctgaccggctgccaatgagtgatgct
ttcactgacaactggactgatggctcacattatgacaacacagggtttgttgctgaggaa
gccaccgccgagaatgccaacagtaatcccctcttaagttcgaaatctagaagcacatct
tcgcatggacgcaggcctttgatcaggcaagataggattgttggtgttcccctggaactc
gagcagtctacacacagacacacaccagaaacagaagtgcctccttccaatccttggcag
aattggaccagaacccctagtccgtttgaagacaggaccgcttttccttccaaattagag
acaacccccactactagcccattgcctgagaggaaagaacatataaaggaatctactgaa
atacctagtcctttttctccaggtgtaccatgggagtatcatgattccaatcccaacagg
agtcttagtaatgtcttttctcaaatccactgccgcccggaatcttctaaaggtgttatt
tcaattagcaaaagcacagagaggctttctcccttaatgaaagatatcaagtccaataaa
ttcaaaaagtcacagagtattgatgagattgacattggtacatacaaagtgtataacata
ccattagaaaactatgctactgggagtgatcacttaggaagccacgaacgaccagataag
atgctgggaccagagcatggtatgtccagtatgtctcgaagccagtcagtcccgatgctg
gatgatgagatgctcacctacggaagtagtaaagggccacaacagcaaaaagctcctatg
acaaaaaaagtctatcaatttgaccaaagcttcaatcctcaaggatcagtggaagtgaaa
gccgaaaagaggataccaccgccttttcaacacaatcctgagtacatgcaacaggccagc
aaagacatcgccaaggatttgattagtcctagagcttacagaggatacccaccgatggag
cagatattttcattttctcagccatctgtgaacgaggatgctgtggtgaatgcccagttc
gcaagccaaggggccagggcaggcttcctgagaagggccgactccctggtgagcgccaca
gaaatggccatgtttaggagggtcaatgagcctcacgagctgccccctactgataggtac
ggcagacctccatataggggagggctggatcgccaaagcagcgttacagtgactgagtcc
cagttcctgaaaaggaatggcaggtatgaagatgaacacccttcatatcaagaagtgaaa
gctcaggcgggaagttttccagttaaaaaccttacccagaggaggccattgtctgcaaga
agctacagtacagagagttacggtgcctcccaaaccaggccagtttcagctaggcctact
atggcagctcttttggaaaaaataccatctgactataacttgggtaactatggtgacaag
ccatcagataacagtgatttaaagacgaggcctactcctgtgaagggagaggagagctgt
ggtaaaatgcctgcagactggagacaacagctgcttagacatatagaagctagacggtta
gacaggaatgctgcttacaaacacaatacagttaaccttggcatgctgccctatggaggt
atttcagcaatgcatgcaggcagaagcatgactttaaacttgcagactaagtctaaattt
gatcatcaagaactacctcttcataaaaccccgtcccagcaaagcaacattttagacaat
ggacaagaagatatatctcctagtggccaatggaatccttatccacttgggaggcgggat
gtacctccggacaccattactaaaaaggcaggcagccacatccagacattgatggggtcc
caaagccttcagcatcgcagccgggagcagcagccatatgagggaaatataaacaaagtg
accatccagcaatttcagtcaccattgcctattcagatcccctcttcacaggccacccgg
ggacctcagcctggacggtgcttaattcaaactaaagggcaaaggagtatggatggatat
ccagagcagttttgtgtgagaatagaaaagaatcctggccttggatttagtatcagtggt
ggaatcagtggacaaggaaatccattcaaaccttctgacaagggtatctttgttactagg
gttcagcctgatgggccagcatcaaacctactgcagcctggtgataagatccttcaggca
aatggacacagttttgtacatatggaacatgaaaaagctgtattactactgaagagtttc
cagaacacagtagacctagttattcaacgtgagcttactgtctaa
DBGET
integrated database retrieval system
