Callithrix jacchus (white-tufted-ear marmoset): 100399788
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Entry
100399788 CDS
T03264
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X3
KO
K12879
THO complex subunit 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100399788 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
100399788 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100399788 (THOC2)
03041 Spliceosome [BR:
cjc03041
]
100399788 (THOC2)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100399788 (THOC2)
Spliceosome [BR:
cjc03041
]
Complex C
Other components
EJC/TREX
100399788 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100399788 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
HetE-N
Motif
Other DBs
NCBI-GeneID:
100399788
NCBI-ProteinID:
XP_017823950
Ensembl:
ENSCJAG00000016157
UniProt:
B0KWH8
LinkDB
All DBs
Position
X:complement(115323247..115466716)
Genome browser
AA seq
1600 aa
AA seq
DB search
MAAAAVVVPAEWIKNWEKSGRGEFLHLCRILSENKSLESSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDNFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGSITSDLMLENIKSLIGCFNLDPNRVLDIILEVFECRPEHDDFFMSLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIAEAKQIVRKLTMVVLSSEKMDDREKEKEKEEEKVERPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCFLSTADQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GRFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSTGSSSKSDESSTEETDKSRERSQCGVKAVNKASNTTPKGNSSNGNSGS
NSNKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKVKDEKFKTTIPNAESKSSQEREREKEPSRERDIAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDIPEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYV
NHTPAPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLIKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKQYPFHLDVFSQYNGKL
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggctgtggtggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgtcggatcctcagtgaaaataaaagccttgagagttcg
acatacagagatttccagcaagctctctatgaattgtcatatcatgtaattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgaaacaaattgtttagaagaa
aaaagcaagagagacaattttacacagttggtattagcatgtttgtatttagtttcagac
acagtcctgaaggaacgcctggatccagaaacactggaatcattagggcttatcaaacaa
tcgcagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcag
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaagcattactagtgatttaatgttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatatcattctagaagtgtttgaatgc
aggccagaacacgatgacttctttatgtctttgttagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatggc
gagacaccatcatctttatacagagttgcagctgtacttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcatcatggatgaacacaaa
cgagaaattgcggaagctaagcaaattgttagaaaacttacgatggttgtgttgtcttct
gaaaaaatggatgatcgagagaaagaaaaggagaaagaagaggagaaagtagagaggcca
cctgataaccaaaaacttggcttgttggaagccttattaaagatcggtgactggcaacat
gcgcagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagca
cttgctatttgcaagctcattcacataactattgaacctctctaccgaagagttggtgtt
cctaaaggtgctaagggctcacctgttaatgctttgcaaaacaagagggcaccaaaacaa
gctgagagttttgaagatttgaggagagatgtgttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtcgtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagaaaaaacggaagttatcctt
agctgttttcttagcactgctgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagtataga
tatcgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgcctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagctgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattct
ttgaaatacctcacttcattgaattatgatgttttggcctattgtatcattgaagcttta
gctaatccagaaaaggaaagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgccggtctt
cttcagtatgttgccaatcagctaaaggcgggtaaaagttttgacctgcttatattgaaa
gaagttgtgcaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggccatgactggtggagagcagctaaaagctgagggtggttattttggtcagatcaga
aacactaaaaaatcctctcagagattaaaggatgctcttttggaccatgatcttgccctt
cctctctgtctccttatggctcagcagaggaatggggtaatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaagctctatgaccagtgtcatgataccctggtgcagttt
ggcaggtttttagcatctaatctgagcacagaagattatataaagcgagtgccttcaatt
gatgtactctgtaatgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcccatcatatttcgtcaaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcataagtacataacatcatgtgagatggtgatggcgcctgtc
cacgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacgttctggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgagaagtcaataaacttaaaatccagatgaaagcaattgatgacaatcaagaaatgccc
ccaaataaaaagaaaaaagagaaggagcgctgtactgctcttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttctacagagattgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagctgtactgaaaatgaagccagtcgatatgga
aggtttctttgctgcatgttagagactgtgaccaggtggcatagcgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtggaaataaggctgatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattataaactaaccaaggcatcagtacattgccttgaaacaggcgaatatactcacatc
cggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaagctttggaaagaagagtacacaaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgtg
caaaatgggcctggtggtgggccttcatcatcatcaacagggagttcatctaaatcggat
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctaataccacacctaaagggaattcaagcaatggaaatagtggctct
aacagcaacaaagctgttaaagaaaatgacaaagaaaaagggaaagagaaggaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccaaaggaggagcggccaaataaagatgaaaaagcaagagaaaccaaggaaaga
acgccaaagtctgacaaagaaaaagaaaaattcaagaaggaagagaaagttaaagatgag
aaattcaagaccactatccccaatgcagaatcaaaatcaagtcaagaaagggaaagagag
aaggagccatccagagagagagatatagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagaaaaaacgccagtttctgggtccttgaagtcacctgttccccgatcagatatt
ccagagcctgaaagggaacaaaaacgccgcaaaattgatacccacccttctccatcacat
tcctccacagtaaaggacagtctcatcgaactcaaggaatcttcagcaaagctctacgtt
aatcatactcctgcaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagag
cggaaaagggatcactcaaacaatgaccgtgaagtgccaccggacttaatcaagagacgt
aaagaagagaatggaacaatgggggtttcaaaacataaaagtgaaagtccatgtgaatct
ccttatccaaatgaaaaagataaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggcagtgattcatttaaatctgagaagatggataaaatctcctccggtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag
gaagagaagaaacaatatccttttcatcttgatgttttcagtcagtataatggaaagctt
tga
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integrated database retrieval system
