Callithrix jacchus (white-tufted-ear marmoset): 100399975
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Entry
100399975 CDS
T03264
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100399975 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100399975 (WDR43)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100399975 (WDR43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_like
UTP15_C
Beta-prop_WDR35_TULP_N
Zip
Nop14
NBCH_WD40
MAT1-1-2
Motif
Other DBs
NCBI-GeneID:
100399975
NCBI-ProteinID:
XP_002757970
Ensembl:
ENSCJAG00000008946
UniProt:
F6YMU0
LinkDB
All DBs
Position
14:complement(83983865..84045540)
Genome browser
AA seq
678 aa
AA seq
DB search
MAAGGGGSGDPLAPAGVPCAFSPHSQAYFALASTDGHLRVWETASNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKL
ISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGSWFQPTIE
RVALNSREPHMCLVRDISNCWAPKVETAITKVRTPVINSEAKVLVPGIPGHHAAIKPAPP
QTEQVESKRKSGGNEVSIEERLGAMDIDTHKKGKDDLQTNSFPVLLTQGLESNDFEMLNK
VLQTRNLNLIKKTVLRMPLHTVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKETTSPGQQAKLVYE
EESSEEESDDEIADKDSDDNWDEDEEESESEKDEDDAEDEDEDAEGKDEENGEDRDRASE
KELNGDSDLDPENESEEE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggcggcggtagcggcgaccctctggccccagctggggtaccttgcgcc
ttctccccgcacagccaggcctacttcgctttggcgtctaccgacggtcacctacgagta
tgggagacggccagcaaccggctacatcaggagtacgtgccttccgcgcacctcagcggt
acctgcacctgtctggcctgggcgccagcgcggttgcaggccaaggaaagtccccagagg
aaaaaaaggaaatcagaagctgtaggaatgagtaaccagactgacttactggctcttggc
acagcagttggtagcattttattatacagcacagtaaaaggagaattacacagtaaatta
ataagtggtggacatgacaacagagtcaactgcatacagtggcatcaagacagtggctgt
ttatatagttgttcagatgataaacatattgtggaatggaacgtacagacgtgcaaagta
aagtgcaaatggaaaggtgacaatagcagtgtcagttccctatgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaagctatgggttttggagaccaaagaagtc
tacagacatttcacaggacatgcgacgccagtttcgtcacttatgttcaccactatcaga
cctcctaatgagagccagccctttgatggaattacaggtctttatttcttatctggagca
gttcatgaccggttacttaatgtctggcaggtccgatcagaaaacaaagaaaagagtgca
gtgatgtcatttacagttaccgatgaacctgtctatattgacttaacattgtcagaaaac
aaagaagagcctgtcaagttggctgttgtttgcagagatggtcaagtccatctttttgaa
cacatattaaatggatactgcaaaaagcctttgacttcaaactgcacaattcagatagca
acacctgggaaaggcaagaaatcaacaccaaaacccatccctattctagctgctggtttt
tgctcagacaaaatgtcattgttgcttgtatatggcagttggtttcagcctactattgaa
cgagtggctttaaactccagagaacctcatatgtgtttagtaagagatatttcaaactgc
tgggcccccaaagtggaaacagctataacaaaggtgaggacaccagtgataaattctgaa
gcaaaagttctggtgcctgggattcctggtcatcatgcagctatcaagcctgctcctcca
caaaccgagcaagtagagagcaagaggaaatcagggggaaatgaggttagcattgaagaa
cgcctgggagcaatggatatagacacacacaaaaaaggaaaggatgacctccagacgaat
agctttccagttcttcttacccagggcttagaaagtaacgattttgaaatgctaaataaa
gttcttcaaactagaaatttaaaccttataaagaagactgtattaaggatgcccctgcat
actgttattccattgttgcaagagcttacaaagaggctacagggacatcctaatagtgct
gtgctaatggttcagtggctaaaatgtgtgttaacagttcatgcatcatacctgtccacg
ttgcctgacctggtaccccagctggggacactctaccagttaatggaaagcagagtcaaa
acttttcagaaactttcacaccttcatggaaagctcattcttctaattacacaagtaaca
gcatcagagaagacaaaggaaacaacttcccctggacagcaggcaaagttggtatatgaa
gaagaatcttctgaagaggagtctgacgatgaaatagcagataaggattctgatgataat
tgggatgaagatgaggaggagagtgaaagtgaaaaagatgaggatgatgctgaagatgaa
gatgaggatgccgaaggaaaagatgaagaaaatggtgaggacagagatagagcaagtgaa
aaagaactaaatggagattctgacttagatcctgaaaatgaaagtgaagaagaatga
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