Callithrix jacchus (white-tufted-ear marmoset): 100400339
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Entry
100400339 CDS
T03264
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X8
KO
K20353
COPII coat assembly protein SEC16
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100400339 (SEC16A)
Membrane trafficking [BR:
cjc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100400339 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
100400339
NCBI-ProteinID:
XP_017832917
Ensembl:
ENSCJAG00000010865
LinkDB
All DBs
Position
1:complement(181993747..182035029)
Genome browser
AA seq
2310 aa
AA seq
DB search
MQPPPQAVPSGAAGPPPAGNPRSMFWAGSPYRRRANNNAPVAPLTCPLQPVTDPFAFSRQ
ALQSTPPFKSSPPVLQGPAAPGFSQQPGLLMPHTQARDGSQGPCEPLPGPLSQPRADATL
LSGASASSAPHGPELNRSAEGGPRSEPEVQTLPHPPHCIPGVDPETSHGGHPQGNTSGLD
RPLSRQNPHDGVVTPAASPSLLQPHLQTPGQWGPLQPSGQHRSPCPEGPTQSGLPGAASI
PHFPTPSILHQGPGHEQHSPLVAPPAALAIDGRDEVGHLQSGSHLASNFDPENTFRQNPR
IVNNWASPELRQNPGVKKEHRPTGALVNPLAQGDSPENQSHHPLGAGASRVPLEADSGAL
AMFFQGGETENEENLSSEKAGSSGQADFDDFCSSAGLGRPLPPAHMEAGGLCQALLPGPS
SEATGDGWGDAAGTGVPDTSGSQYENVENLEFIQNQEVLPSEPLSLDSSSSSVQFRCGPL
PGPAVPRHGAVCHAGTPDATLHVVNPDGLASGYSSRSHRRLSGSARPQELVGTFIQQEVG
KPEDEASGSFFKQIDSSPIGGETDETTVSQNYRGSVSQPSTPSPPKPTGIFQTSANSSFE
PVKSHLVGVKPFEADRANVVGEVRETCAQQKQRRPAAALPNASPGNLEQPPDNMETLCAP
QVCPLPLSSTTEPGHMAPHAGVPPLDTVYPAPEKRPSARAQGPGKCESPATTLWAQSELP
DFGGNVLLAPAAPVLYVPAKPQPPEVVQPPEEAASGQQSQKPSLAAPLQSRGGIGASENL
ENPPKMGEEEALQSQASSGYASLLSSPPTESVQNPPVLIAQPDHSYHLAQPIHFSVSLPN
PNEKNQSWRETLVGDRPAVSSWALSGDSGENASLSGIPTSSVLSLSLPSSVSQSNFLQGS
GASEMVSNQPANLLVQPPSQPIPENLVPESQKDAKAGSALPGFANSPAGSTSVVLVPPAN
GTLVPDGDKANHSSHQEDTGGALDFTLGRASENPLSMYSPSLPEGLASQQAAAGHPRQSG
PGAPNPDCFYQQVMKDAQGQHGLEKAQQELLLPQQRASSPQVPKAMFSELSNSESLPAQG
QSQNSVQPPATLAPANTGQQLPPRLLQPSSASLVSASSSQAAMPSEQPWPQPVPVLAPGL
PPPDLAAYYYYRPLYDAYQSQYPSPYPPEPGAASLYYQDIYSLYEPRYRPYDSAASTYTE
NYRYPEPERPSSRASHSSERPPPRQGYPEGYYGSKSGWSSQSDYYAGYYSSQCSYGDPGQ
WDHYHYSAGVRDPHTYDRRYWCDVEYDTYRREHSAYGDRPEKRDSNWRYDPRFTGSFDDD
PDPHRDPYGEEVDRHSVHSEQSARSLRSTHSLASHRSSLSSHSRQSQIYRSHNMTASSYE
APLLPGSFHGDFAYGPYRSNFSSGPGFPEFGYPADTAWPAVEQVSSRPTSPEKFSVPHVC
ARFGPGGQLIKVIPNLPSEGQPALVEVHSMEALLQHTSEQEEMRAFPGPLGKDDTHKVDV
INFAQNKAMKCLQNENLIDKESASLLWNFIVLLCRQNGTVVGTDIAELLLRDHRTVWLPG
KSPNEANLIDFTNEAVEQVEEEESGEAQLSFLTGGPMAAASSLERETERFRELLLYGRKK
DALESAMKNGLWGHALLLASKMDNWTHARVMTRFANSLPINDPLQTVYQLMSGRMPAAST
SCGDEKWGDWRPHLAMVLSNLNNNVDVESRTMATMGDTLASKGLLDAAHFCYLMAQVGFG
VYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGAQTCSLPTFQVFKFIYSC
RLAEMGLATQAFHYCEAIAKSILTQPHQHSPVLISQLVQMASQLRLFDPQLREKPEEESL
TSPAWLVHLQQVERQIKEGAMVWPQDGAFPQQCPGTPSSEVEQLEGPGVSQPVALGIANP
LLAVPAPSPEHSSPSVLLLPSAPPTLPDGPLASPAGVPMFPVSPPLGPLEPGPGCVTAGS
ALGFPDPSRPDPATLGLGPGLPSGVPPLQERRHLLQEARSPDPGSVPQDVPVGNSLSELS
EENFAGKFANLPQISSERPHSEVPPGWDHADSGPTQPPLSLSPAPETKRHGQATKKETKD
TKKSESWLSRLLHGKRKTEAYLPDDKNKSIVWDEKKNQWVNLNEPEEEKKALPPPPTSFP
KAVPAAPPGLEGPPGGPVNMFSRRAAGTRARYVDVLNPSGAQRSEPALAPADFVAPLAPL
PVPSNLFVPSPDAEEPQLPDGAVREGPAPARGLANPEPAPESKAPGDPAAGGPPGGAVPF
YNPAQPAQACGTSGSSRLGRISQRKHPVLN
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccaccccaggcagtcccgtctggcgctgctgggccacctccagctgggaac
cctcggagcatgttctgggctggcagcccttacaggaggcgagcgaataataatgcacca
gtggctccgctcacttgcccgttgcagccggtgacggatccgtttgcttttagtagacag
gcgctccaaagcacaccgccattcaaaagcagcccacctgtcctgcagggcccagcagcc
cctgggttttctcagcagcccggtttgcttatgcctcacacgcaagccagggacggctct
caggggccctgcgagcccctgccgggacctctgtcacagcccagagcagatgccactctg
ctttctggtgcatcagcatcttcagcacctcatgggcctgagctgaacaggagtgcagag
ggcggtcccaggtcagagcctgaagttcagaccctgccacatccacctcactgcattcca
ggagtggatcctgaaacgtctcatgggggccatcctcaggggaacacatctgggcttgac
cgacccctaagcaggcaaaacccacatgatggtgtggttaccccagcggcatcgccttcc
ctgctccagcctcatctgcagacgccgggacagtgggggccactgcagccctcagggcaa
catcgttcaccctgccctgaaggacccactcagagcgggctgcctggtgctgccagcatt
cctcatttccctactccgtccatcctgcatcagggccctggtcacgagcaacacagccct
ctagtggctcccccggcagctttggccattgacggaagagacgaggtgggccatttgcaa
agtggaagccacctggccagtaactttgaccctgaaaatacattcaggcaaaatcctaga
attgtgaataattgggcaagcccggagctcaggcagaatccaggagtgaagaaggagcac
cggcccaccggtgctcttgtgaacccccttgcccagggagatagcccagaaaaccaatcg
caccatccactgggggctggggccagccgcgtcccgctggaagcagactcgggagctctg
gcgatgtttttccaagggggagagacagaaaatgaggagaatctctcatctgaaaaggca
ggctcatctggtcaagcagactttgacgatttctgctccagcgctggactgggccgtcca
ctcccacctgcacacatggaggcaggtggcctctgtcaggcccttctcccaggccccagc
agtgaggccactggtgatgggtggggtgatgcagcaggcacaggggtgccggacaccagt
ggctcgcagtatgagaatgttgagaacttagaattcattcagaatcaggaagttctgcca
agtgagcccctcagtttggactcttcctcctcaagtgtccagttcagatgtgggcccctt
cctgggccagcggtacccaggcatggtgctgtgtgccatgctggaacccccgatgccaca
ctgcatgtagtgaaccctgacggcctggcatctggctatagcagcagaagccacaggagg
ctttcgggctcagccaggccccaggaactggttggcacgttcattcagcaagaagttgga
aaacccgaggatgaagcttcaggtagtttttttaagcaaattgattcctctcccatagga
ggtgagacagatgagaccactgtaagccagaattaccgtggcagtgtgtcccagccttca
accccaagccccccaaaacctacaggaatatttcagacaagtgcaaatagctcttttgaa
ccagtaaaatcccacttagttggggtaaaaccatttgaggcggatcgtgccaatgtggtg
ggtgaagttagggagacctgtgcccagcagaagcagcgcagaccagctgccgccctgcct
aatgcttcccctggcaacctggagcagccaccagacaacatggagaccctctgtgcaccc
caggtctgccctttgcctctcagctctaccacggaacccgggcacatggctccacatgca
ggggtgccgccattggatactgtgtatccagcccctgagaagaggccttcggccagggcc
caggggcctgggaagtgcgagagcccagcaacgactctgtgggcgcagagtgagctgcca
gacttcggaggcaatgtcctcctggcccctgcagccccagtgctttatgtgcctgcaaaa
cctcagccacctgaagttgttcagcctccagaagaggcggcgtccgggcagcagtcacag
aagccaagcttggcggcccctttgcagagccgaggtggcattggtgcttccgagaacctt
gagaaccctcccaaaatgggagaagaggaggcccttcagtcccaggcgagttctggttat
gccagtttgttatcctcaccgcccactgagtctgtgcagaatccgcccgtcttgattgcc
cagcctgatcacagctaccatctggctcagcccattcacttttctgtgtccttaccgaac
cctaatgagaagaatcagtcctggagagagactttggtgggggatagacctgcagtcagc
agctgggctctcagcggtgattctggggagaacgcttctctgtctgggattccaaccagc
tctgtgcttagcttgtctctgcctagcagtgtttcccagagtaattttctacaaggttct
ggtgcttctgaaatggtttctaatcagcctgccaatttgctggttcaaccaccgtcccag
ccaattccagagaacttggttccagaaagtcagaaggatgctaaggcaggaagtgctctt
cccgggtttgctaatagccctgcaggaagcacaagtgtggtgttagttccacctgcaaat
ggcaccctggtgcctgatggtgataaggcaaaccattccagtcatcaggaagacaccggc
ggagccctagactttaccttaggcagggcttcggaaaaccccttgagcatgtacagcccg
tcccttcctgaaggcctcgcttctcagcaagctgctgccggtcatcccagacaatctggg
cccggggcgcctaacccggactgtttttatcagcaggtcatgaaagacgcccagggccag
catggcctggaaaaagcccagcaggagctgttgctgccccagcaacgggcttcttcccca
caagtgcccaaagccatgttttcagagctgtcaaattcagaaagtctgccagcacaggga
cagtcccagaactcagtccagccaccagcaactctggctccggccaacacgggtcagcag
ctgccacctcggctgcttcagccttccagtgcgtcgctggtgtccgccagctccagccag
gcagccatgccatcagagcagccgtggccacagccggtccctgtgcttgctcccggcctg
ccgcctccggacctggccgcctactactactaccggcctctgtacgatgcctaccagtct
cagtacccctcgccgtacccgccggagcctggtgcggcctccctctattaccaggatatc
tacagcctctacgagcctcgatacaggccctatgacagcgcagcgtccacctacaccgag
aactaccgctaccctgagcctgagcggcccagctcccgagccagccactcctcagagcgg
ccacctcccaggcaggggtatcctgaagggtactatggttccaaaagcggatggagcagt
cagagcgattactacgcaggttactattccagccagtgcagttacggagatccaggtcag
tgggatcattaccactacagtgctggagtcagggacccccacacctatgaccggaggtac
tggtgcgacgtggagtacgacacgtaccggagagagcactctgcctacggagacaggcct
gagaaacgtgatagcaactggagatacgaccctcgcttcacagggagttttgacgatgac
cctgatcctcacagagacccttatggagaagaggtggaccggcacagcgtccacagtgag
cagtcggcgcggagcctgcgcagcacacacagtctggccagccaccgcagcagcctcagc
tcccactcacgccagagtcagatttacagaagccacaacatgactgccagttcctacgag
gccccacttcttccaggctcctttcacggtgatttcgcctacggcccctaccgcagcaat
ttcagcagtggcccaggcttcccagagtttggctatcctgcagacactgcctggcctgct
gtggagcaagtttcatcaagaccaacttctcctgagaaattttcagtgcctcatgtctgt
gccaggtttggccctggcggtcagcttatcaaagtgattcccaatctgccttcagaagga
cagccggccctggttgaggtccacagcatggaggccctgctgcagcacacatccgagcag
gaggagatgcgggcgtttccgggacccctgggcaaagacgacacccataaagtggatgtt
attaattttgcacagaacaaagccatgaaatgtttgcagaacgaaaatttaattgacaaa
gagtctgcaagtcttctttggaattttattgttctcctttgcagacagaacgggaccgtg
gtagggactgatattgcggagcttctgttacgagaccacagaacagtgtggcttcctggg
aagtcacccaatgaggccaacctgattgatttcacgaatgaggcggtggagcaggtagaa
gaggaggagtccggcgaggcccagctctccttcctcactggtggtcccatggctgctgcc
agctcgctggagagagagaccgagaggttccgggagctgttgctgtatggccgtaagaag
gatgctttggagtctgccatgaagaacggcttgtggggtcacgcgctactgcttgcaagt
aagatggacaactggacgcacgcccgagtcatgaccaggtttgccaacagcctcccaatc
aacgatccccttcagactgtctaccagctcatgtccgggcggatgcctgccgcgtccacg
tcctgtggagatgagaaatggggagattggaggccgcacctcgccatggtcttgtccaac
ttgaacaacaacgtggacgttgagtccaggacgatggccaccatgggcgacactctggct
tccaagggcctcttagatgctgcacacttttgctaccttatggcccaggttggatttggg
gtttatacaaagaaaactacaaaacttgtcttaatcggatcaaatcacagtttaccattc
ttaaagtttgcgaccaatgaagcgatccagaggacggaggcctatgagtacgcccagtcc
ctgggggcccagacctgctccctgcccactttccaggtgtttaagttcatctactcctgc
cgcctggcggaaatggggctggccacgcaagccttccactactgcgaggccatcgcgaag
agcatcctgacgcagccgcaccagcactccccggtgctcatcagccagcttgtgcagatg
gcttcccagttacgactctttgatccccagctgagagagaagccagaagaggagtccttg
acctcacctgcctggctggttcacctgcagcaggtggagcggcagatcaaggagggggcc
atggtgtggcctcaggacggagccttcccacagcagtgtcctggcacgccaagctccgag
gtggagcagttggaggggccaggagtcagtcagccggtggccctggggatcgccaaccca
ctgctggcagtgcctgcaccgagccctgagcactcgagcccaagcgtgctgctgctgccc
tcagctccgccaacgctccctgatggcccattggccagtcctgccggggtgccaatgttc
ccagtgtcaccgcccctggggcccctcgagccgggtcctggctgtgtgactgcagggtct
gcacttggcttcccagatccctccaggcctgatcctgcaactctgggcctggggcctggc
ctgccatctggcgtgccacctctccaggaaaggagacacctgcttcaggaagccaggagc
ccagacccagggtcggtgccgcaggatgtgcctgttggaaactcactttcggagctaagc
gaagaaaattttgctggaaaatttgcgaatctgccccaaatctccagtgaacgccctcat
tcggaggtccccccagggtgggatcatgctgactcgggtccgacgcagccacctctgtct
ctctcacctgctcctgaaacgaagagacacggacaagcaaccaagaaagagacaaaggac
actaagaagagtgaatcctggttatctcgtttgctacatgggaagagaaagacagaagct
tatttgccagatgacaagaacaaatcgattgtttgggatgaaaagaaaaaccagtgggtg
aatttaaatgagccagaagaggagaagaaggctcttcccccacctccaacctcctttccc
aaggctgtgccagctgccccgcctggcctcgaagggcctcctggagggcccgtgaacatg
ttctctagaagagcagctggaaccagagctcgctacgttgatgtcctgaacccgagcggg
gcccagcggagtgagccagcgcttgctcctgcggactttgtcgctccgcttgcaccactc
ccggttccttctaacttgttcgtgccgagcccggatgcagaagaaccacagcttccagat
ggggctgtcagggaaggaccagcaccagctaggggcctggccaatccagaacctgcccca
gagtccaaggctcctggtgaccctgctgcagggggccctcctggcggggccgtgcccttc
tacaaccctgctcagccggcacaggcctgtggcacctctgggagctcaaggctaggacgg
atcagccagaggaagcacccggtactgaactag
DBGET
integrated database retrieval system
