Callithrix jacchus (white-tufted-ear marmoset): 100400515
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Entry
100400515 CDS
T03264
Symbol
ABCA8
Name
(RefSeq) ABC-type organic anion transporter ABCA8 isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100400515 (ABCA8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100400515 (ABCA8)
Transporters [BR:
cjc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100400515 (ABCA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
MMR_HSR1
AAA_22
AAA_25
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
100400515
NCBI-ProteinID:
XP_035157529
Ensembl:
ENSCJAG00000000190
LinkDB
All DBs
Position
5:complement(121000728..121107237)
Genome browser
AA seq
1621 aa
AA seq
DB search
MRKREISVCQQTGALLCKNFLKKWRMKRESLLEWMNALVLLLCLYTYPHGHQVNDFSSPL
TNDLGRLDAFNESEFSVAYTPVTKTTQQIMNKVASASFLAGKMVFGLPDEESIKEFTANH
SEDIARVIFTNTYSYNLKFLLGSRMPTKKEHGDHKAHCYVTYEDVYCEVSEFWNKGFVVL
QATINAAIIEITANHSVMEELMSVTGKIMKIHSFIHQSGIITDIFLFACIISFSPFIYYA
SVNVARERKRMKGLMTMMGLQDSAFWLSWGLLYAGFIFIMALFLALVIKSIQFIILSGFM
VVFSLFLLYGLSLIPLAFLMSIWVKKSFLSGLVGFLLTVFCGSLGFISLYRHLPASLDWI
LSLLSPFAFMLGMAQLLHLDYDLNSNAFPHPSDGSNLIVATNFILAFDTCLYLALVIYFD
KILPNEYGRRRSPLFFLKSSFWSQTQKSDHVALEDEMDSDPSSNDSFEPVPPEFHGKEAI
RIRSVTKEYKGKPDKIEALKDLIFDIYEGQITAILGHSGAGKSTLLNILSGLSVPTKGSV
TIYNNKLSEMADLENLCKLTGVCPQFNVQFDFLTVKENLRLFAKIKGILPQEVDEEIQRV
LLEFEMKNIQDVLAQNLSGGQKRKLTFGIAILGDPPIFLLDEPTAGLDPFSRHQVWNLLK
ERKTDHVILFSTQFMDEADILADRKVFLSKGKLKCVGSSLFLKKKWGIGYHLSLQLNEIC
VEENITSLVKQHIPDAKLSAKSEGKLVYTLPLERTNKFPELYKDLDSYPDLGIENYGVSM
TTLNEVFLKLEGKSTINELDIATLGEVQVEKAGDTEKLVELEQVLSSLNKMRKTIGGVSL
WRQQLCTIARVRLLKLKHERKALLALLLILIVGFCPFLVDYIDIKMYYDSYTLELSPHLY
FLAPGQQPHDPLTQLLIINKTGASIDDFIHSLEHQKIALEVDAFGTRNGTDDPSYNGAIT
VCGNEKNYSFSLACNAKRLNCFPVLMDVVSNGLLGMVKPSVRIHTERGTFLGNGQSSPLG
YLMYIMFWLVLTSSCPPYIAMSSIDDYKNRARAQLRISGLFPSAYWFGQALVDVPLYFLM
FTFISLMSYVLVFEEIFVTVIQIIQIPCAVGYSFSLIFMTYVISFIFHKGRKNSGIWSFC
FYIITLFSVAVFAFSIFENEIPFLFTFLIPPSTMVGCLFLSYHLFLSSYFGGEPKNVQGV
LVFLIPFLHFIIFLFILRCLEWKFGKKSMRKDPVFRIYPRSSDVCQNPEEPEGEDEDVQM
ERVRTANALNSTNFDEKPVIIASCLRKEYAGKRKGCFSKRKNKIATRNVSFCVRKGEVLG
LLGHNGAGKSTSIKVITGDTKPTAGQVLLKGSAGGDALEFLGYCPQENALWPNLTVRQHL
EVYAAVKGLRKEDAEVAITRLVDALKLQDQLKAPVKTLSEGIKRKLCFVLSILGNPSVVL
LDEPSTGMDPEGQQQMWQTIRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIG
SIQHLKSKFGKDYLLEMKVKNVAQVEPLHAEILRLFPQAARQERYSSLMVYKLPVEDVRP
LAQTFFKLEKVKQSFDLEEYSLSQSTLEQVFLELSKEQELGNFEEDFDPSVKWKLLPQEE
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagagagatcagtgtgtgtcaacaaactggggccttattatgcaagaacttt
cttaaaaaatggagaatgaaaagagagtccttactggaatggatgaatgcattggtctta
ctgctttgtttgtacacatatcctcatggtcatcaagtaaatgatttttcttcaccactt
accaatgacctgggacggctagatgcatttaatgaatccgaattttcagttgcatacaca
cctgtcaccaaaacaacccaacagataatgaataaagtagcctctgcttccttcctggca
ggtaaaatggtcttcggactgccagatgaagaaagtattaaagaattcacagcaaatcat
tctgaagatatagcaagagtcatctttactaatacatactcatataatttgaagttcttg
ctaggatccagaatgccaacaaagaaggaacacggggaccataaagctcattgttatgta
acatatgaagatgtttactgtgaagtttcagaattctggaacaaaggttttgtggttctt
caagctaccattaatgctgctattatagaaattacagcaaatcactcagtgatggaagag
ctgatgtcagttactggaaaaattatgaagatacattccttcattcaccaatcaggaatt
ataactgatatatttctttttgcctgcattatttccttttctccattcatttactatgca
tctgttaatgttgcaagggagaggaagaggatgaagggcttgatgacaatgatgggtctt
caggattcagcattttggctctcctggggtttgctctatgctggtttcatcttcattatg
gcccttttcttggcacttgttataaaatctatccagtttatcattctgtctggctttatg
gtggttttcagcctctttctcctatatggattgtctttgatacctttggctttcttaatg
agcatctgggtaaagaaatctttcctcagtggcctggttggattccttctcactgtcttt
tgtgggagtcttgggttcatatcactgtacagacaccttcctgcatctttggattggatt
ttaagcttgcttagtccctttgccttcatgcttggaatggcccagcttttacatttggac
tatgatttgaattctaatgcatttcctcatccatcggacggctcaaatctcattgtagca
acaaatttcatattggcatttgatacttgcctctatctggcattggtgatttactttgac
aaaattttgccaaatgaatatggacgtcgacgttcacctttatttttcctgaagtcctca
ttttggtcacagacacaaaagtctgatcatgtggcccttgaagatgaaatggattctgat
ccttcatctaatgactcttttgaaccagtgcctccagaattccatgggaaagaagccatc
agaatcagaagtgttacaaaagaatacaaaggaaagcctgacaaaatagaagccttgaaa
gatctgatatttgacatttacgaaggccaaatcactgccatacttggtcacagtggagct
ggaaagtcaacactactaaacattctcagtggcttgtctgttcccaccaaaggttcagtc
accatctataacaataagctttcagaaatggctgacctagaaaatctctgcaagctgacc
ggagtttgtccacaattcaatgtgcaatttgacttcctcactgtgaaagaaaacctcaga
ctctttgctaaaattaaagggattctgccacaagaagtggatgaagagatacaaagagtt
ttgctggaatttgaaatgaaaaatattcaggatgttcttgctcaaaacttaagcggtgga
cagaaaagaaagctaacctttgggattgccattttaggagatcctccgattttcctgttg
gatgaaccaactgctggattggatcccttttcaagacaccaagtatggaatcttttgaaa
gaacgcaaaacagatcacgtgatcctcttcagtacccagttcatggatgaggctgacatc
ctggcagacaggaaagtatttctctccaaagggaagctaaagtgtgtgggctcttctttg
tttctaaagaagaaatgggggattggatatcacttaagcttgcagttaaatgaaatatgt
gttgaggaaaacataacatcacttgttaaacagcacatacctgatgccaaattatcagcc
aaaagcgaaggaaaacttgtttatacattacccttagaaagaacaaataaatttccagaa
ctttacaaggatctcgatagctatcctgacctaggaattgagaattacggtgtttccatg
acaactttaaatgaagtattcctgaaactagaaggaaaatcaacaattaatgaattggac
attgctactttgggagaagtacaagtggaaaaagctggcgacactgaaaagcttgttgaa
ttggaacaagtcctctcttcacttaacaagatgagaaagacaataggtggtgtgtctctc
tggcgacagcaattatgtacaattgcaagagttcgcttgttaaagttaaagcatgaaaga
aaagctcttttagcactgctattaattctaatagttggattttgcccttttctggtggac
tatattgacatcaaaatgtattacgacagttacactttggaactttctcctcatttgtac
ttccttgctcctggacaacaaccacatgaccctctcactcaattattgatcatcaataaa
acaggggcaagcattgatgactttatacattctttggaacaccagaagatagctttagaa
gtggatgcatttggaactagaaatggtactgatgacccatcttataatggagccatcaca
gtgtgtggtaatgaaaagaattacagcttttcgttagcatgcaatgccaaaagattgaat
tgcttcccagttcttatggatgttgttagtaatgggctacttggaatggttaaaccatca
gtacgtatccatactgaaagaggtacatttttggggaatggacagagcagtccactagga
tacctgatgtatatcatgttctggctggttttaacatcgagttgcccaccttacattgcc
atgagcagcatcgatgattataagaacagagctcgggcccagctacggatttcaggactc
ttcccttctgcttactggtttgggcaggcgctggtggatgttcccctgtacttcttgatg
ttcacttttatatctttaatgagctacgttttagtgtttgaagaaatatttgtaactgta
attcaaattattcaaatcccatgtgctgttggttattccttttcccttatcttcatgaca
tatgtgatttccttcatctttcacaaagggagaaaaaatagtggcatttggtcattttgt
ttctatattatcactttattctctgtggctgtatttgcattcagtatctttgaaaatgaa
attccatttctcttcacctttttaataccaccttccacaatggttggctgtttattctta
tcttatcatctcttcttatcttcttactttggtggagagccaaagaatgtacagggagtt
ctggtattcctaattcctttccttcattttattatttttctttttattcttcgatgtctg
gaatggaagtttggaaagaaatcaatgagaaaggatcctgtctttagaatttatccaaga
agcagtgatgtgtgtcaaaatccagaagaaccagaaggggaagatgaagatgttcagatg
gaaagagtgagaacagcaaatgccttgaattctactaattttgatgagaagcccgtcatc
attgccagctgtctacgcaaggagtatgcagggaagaggaaaggctgtttctccaagagg
aagaataagatagccacaagaaatgtctccttctgtgttagaaaaggtgaggttttagga
ttattaggacataatggagctggcaaaagcacatccattaaggtgataactggagacaca
aagccaactgctggacaggtgctgctgaaagggagtgctggaggggatgccctcgagttc
ctggggtactgccctcaggagaatgcactgtggcccaacctgacagtgaggcagcacctg
gaagtgtatgctgccgtgaaagggctgaggaaagaggatgccgaggttgccatcacacgg
ttagtggatgcactcaagctgcaggaccagctgaaggctcctgtgaagaccttgtcagag
ggaataaagagaaagctgtgcttcgtgctgagcatcctggggaacccgtcagtggtgctt
ttggatgagccgtcaaccgggatggacccggaggggcagcagcaaatgtggcagaccatc
cgggccacctttagaaacactgaaaggggtgccctcctgaccacccactacatggcagag
gctgaggccgtgtgtgaccgagtggccatcatggtgtctgggaggttgagatgcatcggt
tccatccaacacctgaaaagcaaatttggcaaagattacctgctggagatgaaggtgaag
aacgtggcacaagtggagcccctccatgcagagattctgaggcttttcccccaagccgct
cgtcaggaaaggtactcctctctgatggtttataagttgccagtggaagatgtgcgacca
ttagcccaaactttcttcaaattagagaaggttaaacagagcttcgacctagaggagtat
agcctctcacagtctactctggagcaggtttttctggagctctccaaggagcaggagctg
ggtaattttgaggaagactttgatccctcagtgaagtggaagctccttccccaggaagag
tcttaa
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integrated database retrieval system
