KEGG T03264: 100400812

Callithrix jacchus (white-tufted-ear marmoset): 100400812

Entry

100400812         CDS       T03264

Symbol

COL4A1

Name

(RefSeq) collagen alpha-1(IV) chain

K06237

collagen type IV alpha

Organism

cjc Callithrix jacchus (white-tufted-ear marmoset)

Pathway

cjc04151

PI3K-Akt signaling pathway

cjc04382

Cornified envelope formation

cjc04510

Focal adhesion

cjc04512

ECM-receptor interaction

cjc04820

Cytoskeleton in muscle cells

cjc04926

Relaxin signaling pathway

cjc04933

AGE-RAGE signaling pathway in diabetic complications

cjc04974

Protein digestion and absorption

cjc05146

Amoebiasis

cjc05165

Human papillomavirus infection

cjc05200

Pathways in cancer

cjc05222

Small cell lung cancer

Brite

KEGG Orthology (KO) [BR:cjc00001]
09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100400812 (COL4A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100400812 (COL4A1)
09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100400812 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100400812 (COL4A1)
09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100400812 (COL4A1)
  09154 Digestive system
   04974 Protein digestion and absorption
    100400812 (COL4A1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    100400812 (COL4A1)
09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100400812 (COL4A1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100400812 (COL4A1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100400812 (COL4A1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100400812 (COL4A1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100400812 (COL4A1)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100400812 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:cjc00536]
    100400812 (COL4A1)
Exosome [BR:cjc04147]
Exosomal proteins
  Exosomal proteins of other cancer cells
   100400812 (COL4A1)
Glycosaminoglycan binding proteins [BR:cjc00536]
Heparan sulfate / Heparin
  Extracellular matrix molecules
   100400812 (COL4A1)

SSDB

Motif

Pfam:

Collagen C4

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

1:complement(25062922..25214214)

AA seq 1669 aa
MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFTGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGP
PGMTGPPGLPGLTGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDYATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGS
PGFPGDPGYPGLVGRQGPQGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP
KGFPGIQGQPGPPGLPVPGQIGAPGFPGERGEKGDRGFPGVSLPGPSGRDGFPGPPGLPG
PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGLAGEIGEKGQKGESCLICDTTGYRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLMGQPGAKGEPGEIYFDLRLK
GDKGDPGFPGQPGVPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGYGPAGPIGDKGEAGFPGGPGSPGLPGPKGEAGKVVPLPGPPGAEGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNG
LPGNPGVQGQKGEPGVGLPGLKGLPGIPGTPGTPGEKGSVGAPGVPGEHGAIGPPGLQGI
RGDPGPPGLPGPMGSPGVPGIGPPGARGPPGGQGPPGLAGPPGIKGEKGFPGFPGLDMPG
PKGDKGAQGLPGVTGQSGLPGLPGQQGTPGLPGFPGSKGEMGVMGTPGQPGSPGPVGSPG
IPGVKGDHGFPGSSGPRGDPGLKGDKGDVGLPGQPGSMDKVDMGTMKGQKGDQGEKGQIG
PIGEKGSRGDPGSPGVPGKDGQAGQPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGSPGLPGEKGAKGEKGQAGPPGIGIPGLPGDKGDQGIAGFPGSPGE
KGEKGSVGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGAKGEVGFPGLAGSP
GIPGAKGEQGFMGPPGPQGQPGLPGSPGHAREGPKGDRGPQGQPGQPGLPGPMGPPGFPG
IDGIKGDKGQPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGLPGVQGFQGAKG
LPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFRKPTPSTLKAGELRTHVSRCQVCMRRT

NT seq 5010 nt +upstreamnt +downstreamnt
atggggccccggctcggcgtctggctgctgttgctgcccgccgcccttctgctccacgag
gagcgcagccgggccgctgcgaagggtggctgtgctggctctggctgtggtaaatgtgac
tgccatggagtgaagggacagaagggtgaaagaggcctcccagggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccacaaggaccaccaggacaaaagggtgat
actggagagccaggactacctggaacaaaagggacaagagggcccccaggagcatctggc
taccctggaaacccaggacttcccggtattcctggccaagacggccctccaggcccccca
ggtattccaggatgcaacggcacaaagggagagagagggccgctcgggccccccggcttg
cctggcttcaccggaaatcccggaccaccagggttaccaggaatgaagggtgatccaggc
gagatacttggccatgtgcccgggatgctgttgaaaggtgaacgaggatttcccggaccc
ccagggatgacaggcccaccaggactgccggggcttacaggccctgttgggcctccagga
tttacgggaccaccaggtcccccaggccctcccggccctccaggtgaaaaggggcaaatg
ggcttaagttttcaaggaccgaaaggtgacaagggtgatcagggggtcagtgggcctccg
ggagtaccaggacaagctcaagttcaggaaaaaggcgactatgccactaagggggaaaag
ggccaaaaaggtgaacctggatttcaaggaatgccaggggtcggagagaaaggtgaacct
ggaaaaccaggacccagaggaaaacccggaaaagatggtgacaaaggggagaaggggagt
cccggttttcctggagatcccgggtacccaggactcgtaggccgccagggcccgcaggga
gataaaggtgaagcaggtcctcccggcccacctggaattgttataggcacaggacctttg
ggagaaaaaggagagcggggctaccctggaactccgggaccaagaggagagccaggcccg
aaaggtttcccgggaatacaaggccaacccggacctccaggcctccctgtacctgggcag
attggtgcccctggcttccctggcgaaagaggagaaaaaggtgaccgaggatttccaggc
gtatctctgccaggaccaagtggaagagatgggttcccgggtcctcctggcctccccggg
ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt
gaccagggtcctcctggaattccagggcagccaggattggcaggtgaaattggagagaaa
ggtcaaaaaggagagagttgcctcatctgtgatacaacaggttatcgggggcctcctggg
ccacagggacccccaggagaaataggtttcccaggacagccaggggccaagggcgacaga
ggtttgcctggcagagacggtgttgccggagtgcccgggcctcaaggtacaccagggctg
atgggccagccaggagccaagggggagcctggtgagatttatttcgacctgcggctcaaa
ggtgacaaaggagacccaggctttccaggacagcctggtgtgccagggagagcaggttct
cctggaagagacggccatccaggtcttcctggccccaagggctcaccgggttccgtggga
ctgaaaggagagcgtggcccccctggaggggttggattcccaggcagtcgtggtgacacc
ggcccccccggacccccaggatatggtcctgctggtcccattggtgacaaaggagaagca
ggctttcctggaggtcctgggtccccaggcctgccaggtccaaagggtgaagcaggaaag
gttgttcctttaccaggcccccctggagcagaaggactgccgggatccccaggattccca
ggtccccaaggagaccgaggctttcctggaaccccaggaaggccaggcctgccgggagag
aagggtgctgtgggccagccggggattggatttccagggccccccggccccaaaggtgtt
gatggcttacctggagacatggggcctccggggactccaggtcgcccaggatttaacggc
ttacctgggaacccaggtgtgcagggccagaagggagagcctggagttggtctaccagga
ctcaaaggcttgccaggtatccccggcaccccgggcacccccggggagaaggggagtgtt
ggagcaccaggcgttcctggagaacacggagcgatcggcccccctgggcttcaggggatc
agaggtgacccaggacctcctggattgccaggccccatggggtctccaggagttccagga
ataggccctcctggagctaggggcccccctggcggacagggaccaccagggttggcaggc
cctcctggaataaaaggcgagaagggtttccctggattccccggactggacatgcctggc
cctaaaggagataaaggggctcaaggacttcccggcgtaacagggcagtcagggctccct
ggccttcctggacagcaggggactccagggcttcctgggtttccaggttccaagggagaa
atgggcgtcatggggacccctgggcagccgggctcaccaggaccagtgggttctccagga
ataccgggtgtaaaaggggaccatggctttccaggctcctcgggacccaggggagaccct
ggcttgaaaggtgataagggtgatgtcggtctccccggccagcctggctccatggataaa
gtggacatgggcacaatgaagggccagaagggagaccaaggagagaaaggacaaatcgga
ccaattggtgagaaaggttcccgaggagaccctgggagcccaggagtgcctggaaaggac
gggcaggcgggacagcccgggcagccaggacccaaaggtgatccaggcataagcggaacc
ccaggttctccgggacttccaggaccaaaagggtcggttggtggcatgggcttgccagga
acacctggagagaaaggcgtgcctggcatccctggcccacaaggttcccctggcttacct
ggagaaaaaggtgcaaaaggagagaaagggcaggcaggcccacctggcataggtatccct
gggctgcctggtgacaagggagatcaagggatagcgggtttcccaggaagccctggagag
aagggagaaaaaggaagcgttgggatcccaggaatgccagggtccccaggccttaaaggc
tctcctggaagcgttggctatccaggaagccctgggctgcctggagaaaaaggtgacaaa
ggcctcccaggattggatggcatccctggcgtcaaaggagaagcaggtctccctgggacg
cctggccccacaggcccagctggccagaaaggggaaccaggcagtgatggaatcccaggg
tcagcaggagagaagggtgaaccaggtcttccaggaagagggttcccaggctttccaggg
gccaaaggagacaaaggtgcaaagggtgaggtgggttttccaggattagctgggagccca
ggaattcctggagccaaaggagagcaaggattcatgggtcctccggggcctcagggacag
ccagggttaccaggatccccaggccacgccagggagggacccaaaggagaccgtggacct
cagggccagcctggccagccaggacttccgggacccatggggcctccagggtttcctggg
attgatggaataaaaggtgacaaaggacaacccggctggccaggagcacccggtgtccca
gggcccaagggagaccctggattccagggcatgcctggaattggtggctctccaggaatc
acaggttctaagggtgatatgggacttccaggagttcaaggatttcaaggtgcaaaaggg
cttcctggcctccagggaattaaaggtgatcaaggagatcagggtgtcccaggagctaaa
ggtctcccgggtcctcctggccccccaggtccttatgacatcatcaaaggggagcctggg
ctccctggtccggagggccccccagggttgaaaggacttcagggacctccaggccctaaa
ggccagcaaggtgtgacaggactggtgggtatacctggacccccaggtattcctgggttt
gacggtgcccctggccagaaaggagagatgggacctgccgggcctactggtccaagagga
tttccaggtccaccaggccccgatgggttgccaggatccatggggcccccaggcacccca
tctgttgatcacggcttccttgtgaccagacacagtcaaacaatagatgacccacagtgt
ccttctgggaccaaaattctttaccatgggtactctctgctctatgtgcaaggcaatgaa
cgggcccacggccaggacttgggcacggccggcagctgcctgcgcaagttcagcaccatg
cccttcctgttctgcaatatcaacaacgtgtgcaacttcgcatcacggaacgactactcg
tactggctgtccactcccgagcccatgcccatgtcaatggcacccatcacaggggacaac
ataagaccatttattagtaggtgtgctgtgtgtgaggcacccgccatggtgatggctgtg
cacagtcagaccattcagatccctccgtgccccagtgggtggtcctcgctgtggatcggc
tactcatttgtgatgcacaccagcgctggtgcagaaggctctggccaagccctggcatcc
cccggctcctgcctggaggagtttagaagcgcgccattcatcgagtgtcacggccgtggg
acctgtaattactacgcaaatgcttacagcttttggctcgccaccatagagagaagcgag
atgttcaggaagcctacgccgtccaccttgaaggcaggggagctacgcacccacgtcagc
cgctgccaagtctgtatgagaagaacataa

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