Callithrix jacchus (white-tufted-ear marmoset): 100400913
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Entry
100400913 CDS
T03264
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjc03037
]
100400913 (CFAP54)
Cilium and associated proteins [BR:
cjc03037
]
Motile cilia and associated proteins
Sperm associated proteins
100400913 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
100400913
NCBI-ProteinID:
XP_017831796
LinkDB
All DBs
Position
9:96076541..96440851
Genome browser
AA seq
3161 aa
AA seq
DB search
MAAQGAPSNSPSDESTTSGLLPELPSTPLLTSTVIKESNGNSRCSLLQCTCPEDSLPIAV
FYGPLDEKNPLLVSCEKEIRELLGFMRKKKAFATEEEKHEFRRRCATSLFNIWTKYAPRL
PADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFSTNFDENKVDVTQFKAAFFPKGF
RDKTAGLTFQALSGKNMCNYQLVCDSDENLRNKESVVQCLHILSFLRLIMQVALPQEHLC
WIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESSVPLLSLRYLTWRATLYTAVC
QCCYDCQAGIHGEAFARHALGKIDELRQLELMSSSKSQEESRRYFREATIKMAVMIFKRG
VYESRRKNKALFRPKIRINLKEVQTFSWPRTVTERLLDEMFDSTASRFLAVLEALSDSNR
RILQTGPIVTDDVEIHDVVSELFMAGKQLLIMSNTGADGMLDFPKTSLLELVIERKDVIS
VDAAVKFIKLAFTYEEWSLFESSAAHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINIKR
NKGLIFPLENYREGEAAQIYLKKIAVHDTYLKICGYSEDIFHLAATLYFCVCTGPQDVQP
DKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWFYLLWQLNEVIHCSKMED
IDIVVVAEVTLRLSEILESLGSPGRKFKKSLDVPLRKGTDEFPGAPKGITEILPILKKNP
VEQLHFAYKLLDKAIGGINLNCMPTTLPNGSSVIDHCYAKHTHHIDGDTYKPLASNSFMM
DLHLELIQAQHRIAVVLLDKLQVLQTPTVSKDISTKGLEKLKQSRSPDCFTELNIMNKIK
KNTLSKAIYLMQKALLIFEKDATSTSSWEFLMEAYSLIERIEAEQNALYSYQKYLESSKR
KKSRVPPPPILLSRTHCSVTLKPAPFTSEVKVSWYCILGCKAEGSYGKVRLNNNHLPNSG
DAIPADGKSIFEVKGLETNEKYVFAVAAYSNNGKLAGGAIGETTKPILVYPPLSTITARM
FLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEKSVICLSNIITITQRRLHADILAETS
SILLYLFLRNIFVISDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNSLN
DSSYALQAVTQCYGLLAPIIYHNIVLVPVVQILIKCIVVLQGLPNIVCSKKHTASFQSVQ
HMIACCVFYITKILRSWREYDLAVMIINYGKKMLDITPESKSLLDGGDEQEEMPEEDSSK
KSLKSKKPQQILLPEKISEQLALLETHLLKLTKQYVTSELSGGEDPIFLYPVVLNWSVKG
AVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEITIPVHDFLKRRNESLLEIKKVKY
KDSTSNKKANKSLKFKAAVMEIGRSAEMQQRMRSKKKETLRDLILKNPAISEMMAHERNK
GASVRKAAQRYLMDYLNPLISSYIKRKRFHRFSLEEMPWRAQMNLYLAGAHFNLVLQKLG
EHAKMKSGTSHMMVSFRSCDPNIFSLYNSGTVLPTRKLTVENYKAMLDFLLTAKKRKANL
PSDAEEFSTFINSKMSDENMSKIQTVYDSDSQSGSSAKEKDRGANLCVMDHFMKIFLYCR
RAMVLAHRGGYWTLLQNCCRAFWNFTQELQILLKQGVDIYKTFPISQDDFLCTSVLPFYL
GAELLIDMLIRLQNTNSIKPVEDKGEFSDPSCYGNIKNDNGGSSLIFEHPLDDVNVVDLK
WIHDFALKSLEVLYQVEKWETLVSLAIQFNTISHERYTEQVTPLLVYAQRQLLLRIHKFK
GPDITQQPCARYEAEYGEKITCRNFVGKQLKINSSTTEETSNCTDLLKMLIYSEYSRAKA
LVCVPVDVTDTLRCFRETLEKSKYHNRSIRHSRKLLSLFLAQTQGERGGINNSTCTSGRV
EFCLGTEEMHMSIPPDLSQEHFRVFSSVEKSKLPYSQLGLVISSYHQTIDVLQASNQRSL
KVQALHSLGSLLIFAEKKRAAFKCWCQALDDIFRKPDVLHTWKEFGPSLTNVTDSHSPLG
FKDYSEEFLSKVGIWGCLQGAVISAKIAQFIQSLNVEKRTDCCILSALLFQGLLRTTLPH
PKAERCYAQYEITQLLPGIELFSDRYRADICSVVASLYYIIRELHFVRQNLIVLPLLALY
QYFVSGICQDLIRNLEARILKIEVLIDLRFFSEAFYEISQIFYGRNMPCSIPAGYKAAGK
MKLFQSFDSGKPLTSKENIQAIDELRNKGLPAILVTIGQPHLLNKFYFVKAYFFLSVAAT
INCVPENKLQTVITDRSKPNLPNLKEINSKDDGGSFYHLTNNEVTLSMLKSTLLMEAEDR
LNFLLSEVEHPGLKTLSQCSVGELEIVVEARLQLAAVALQRHRAAYSAAIVFSTLTLLQD
SKLFQKKVVQEDTENPVSPGTSATEKKDDNEFLDPISLNAREYFNIHLWLRCRLALVTAF
VAQIHGIGIVKEDDMTDCLSLINEVCMEAKSAGDTELQAELLTQAVILGLQEKHLKADII
TKLQDIIHLLEGNEYISPQSWLTLARSLVLLDDLTKAEKFKESPFSKTGKLNSLTQAHSI
LTEQMLTFGETIEFPSSNTKYANPLEPLKNIYLPHVMLLAKIKMRIGHTMAKQVYYNNKR
KDPSKWLPALHLFDVALKLCKTTAAEEPEVEAEILFQKGKIERQILMEEKSPSFQLESLY
EAIQLSLNNDQNSGLIRDSYLEMALLYFHLKKPKRNISGSPLTLKSPLRRSSSVKETAAS
KFEMYSSLAWIAIRAAAQVSEAVLAINLLMGKKNIRTHKVNQLALSNIPEFAALDLLSSY
TDYLLDNYQVVFQTSCTFLYQNDDVYDSTDGRKKTQTKVDITWILLLRYYIHLQRINNLS
KLLASATPVSGISLPDDTLLTSLYNSELILRQKEVHYFLKKFLQLYSSSSIDEFPKELLC
LENPPLSEKDLRESSAKLYRDSSLQSILSFKPVSSSSCMDIMPIEMVTQASNKELCFQWY
IPPLDSPPKETEPMVLLLYAYNLKPLKISDVRHCTFNNVCAGSLWIPLNRVIAIHEKLSN
LVQIAEISLPAAPEITLNENVHEIGDGEEKSVDNEMEDMIIQCCSEIASLFLNDKESTPL
SEVPFDISLPSIFSLERLFDLANGCILPGGSLFSWIVSIIP
NT seq
9486 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagggcgccccctcgaattctccgtcggatgagtccaccacctcggggttg
ctgccagaactgccgtcaaccccgctcctgacctccaccgtgattaaggagtcaaacggt
aactcccggtgctcgctgcttcagtgtacctgccccgaggactcgttgcctatagccgtg
ttttatgggccgctggacgagaaaaacccgcttctggtctcctgtgagaaggagatccgg
gagttgttaggctttatgaggaaaaagaaggcttttgccaccgaggaagagaagcacgaa
ttccgccggcgttgtgccacttctttgtttaatatctggactaaatacgcccccaggctg
ccagctgactattacaatgaaaagcttctgaaggttggagatagcctttgtcaaatgaaa
gaatacaaactggcccttttacaatgctatggaagatatcttcagcagttcagtaccaat
tttgatgagaataaagtggatgtaactcaattcaaagctgcctttttcccaaaaggcttt
agagataaaactgccggacttacatttcaagctttgagtggcaaaaatatgtgcaactac
cagctggtctgtgacagtgatgaaaacctgcggaataaagaatccgtggtccagtgtctg
catatcttgtccttcttaaggctcatcatgcaggtggctctgccacaggagcatctatgc
tggattatcttcaatggtaccatttatatttacaccatttgcagaaaactgatggtcata
ggtcagtcttccaaggccttagagtatctcctgtgggccagcatgtgtatggagtcctcc
gtcccgcttctgtcactcagatacttgacatggcgggctactctctacacggctgtttgc
cagtgctgctatgattgccaagctgggattcacggagaggcatttgctcggcatgctttg
ggtaaaattgatgagttaaggcaactggaattaatgagttcctcaaaatcccaggaagaa
tcgagaagatattttagagaggccacaataaagatggcagtgatgatcttcaaaagagga
gtctatgaatctagaagaaaaaacaaagctctctttagacccaagataagaattaaccta
aaggaagtacaaactttttcatggccacgtactgtcacagagcggctactggatgagatg
tttgatagcactgcatcccggtttctggctgtcttggaagctctttctgattcaaatagg
cgaatactgcaaactggacccattgttacagatgatgtggagattcatgatgttgtttca
gaattgtttatggcaggaaaacaactattgataatgtcaaatactggtgcagatggaatg
cttgattttccaaaaacatctcttctggaacttgtgatagaaagaaaagatgttatttct
gtggatgctgctgtgaagtttataaaattagcttttacttatgaggagtggagtttattt
gaatcttctgctgcacatcttatttattttctccagaggcaggatgatccagagtcaaag
aaagcagagaaggatttaactcttctgattgcaatggaaccactaatcaacataaagaga
aacaaaggtttgatctttcctttggaaaactatagagaaggagaggcggctcaaatttat
ttaaaaaaaattgctgttcatgatacttatttgaagatttgtggatattcagaggatatt
ttccatttggcagcaaccttgtatttctgtgtctgcaccggtcctcaggatgttcagcct
gataaggaaattgttgtggacacaataatgttcctatggcagaaatgcaaattaggaatt
cagcggcttaatatatccagaaatgactatgcaaaattcacccagaaaatcagtactaac
aaatggttttatcttctgtggcagttaaatgaagtaattcactgctctaaaatggaagac
attgacattgtggtagtggcagaagtcacattacggttaagtgaaatattggaatcttta
ggaagtccaggaagaaaatttaaaaaatctctagatgtacctttaagaaaagggactgat
gaattccctggagctccaaaagggatcacagaaattcttccaatattaaagaaaaatcct
gtggaacagttacattttgcttataaacttcttgacaaagcaataggtggaataaatttg
aattgcatgccaaccactttgccaaatggatcttcagtaattgaccactgctatgccaag
catacccaccacatagatggagatacttacaaaccacttgcctcaaatagtttcatgatg
gatttgcatcttgaactaattcaagctcagcatcgaatagctgttgtgcttctggacaaa
ttgcaagttttgcagaccccaactgttagcaaagatatttctaccaagggtttggaaaag
ttaaaacaatctagaagccctgattgttttacagaattaaatataatgaataaaataaag
aagaatacattatccaaagcaatttacttaatgcagaaggctcttttaatattcgagaag
gatgcaacctctacatcttcatgggaatttttgatggaagcatattctttaattgagagg
attgaagctgaacaaaatgccctgtattcctatcagaaatatttggaaagttcaaaaaga
aagaaaagcagagtccctcctccacctatcctgctgtctcgaactcattgttctgtgaca
ctcaaacctgctccatttacttcagaggttaaggtctcttggtactgcattttgggttgc
aaagcagaaggaagttatggaaaagtacggctaaacaataatcatctcccaaattcagga
gatgcgataccagctgacggtaaaagcatttttgaagtgaagggtttagaaaccaatgaa
aaatatgtatttgcagttgctgcctattctaataatggaaagcttgctgggggtgctatt
ggggagacaactaaaccaattctggtttatccacccctttctactattactgctcggatg
ttcctcacacaggttgcctatcaagttggtaactatgagttggccaagaaagttttctca
ccagtttgggattattttgttgcttcccctcttcaggatgaaaaatctgttatttgttta
agcaatataattactattacacagagaagattacatgcagatattttggcagagacttct
tcaatcctcttatacctttttctcagaaatatttttgtaataagtgacatcaaaattaaa
gaagaaaatcttttctgtgataatattaaaggcaatgagattttcccatctcaacaaatt
gccagactgattgagtgtgagagagtactagtggcattggaacttagcaactctctaaat
gattccagctatgctcttcaagctgtgactcagtgttatggccttcttgctcccataatc
tatcacaatattgttttggtacctgttgtacagatcttgataaagtgtatagtggttttg
caaggactaccaaatatcgtctgttcgaagaaacatactgcgagttttcaaagtgtacag
cacatgatagcttgttgtgttttctacataacaaagattctacgttcatggagggaatat
gacctggcagtaatgattataaattatgggaaaaaaatgttggacatcacaccagaaagc
aagtctctgttggatggtggtgatgaacaagaagaaatgccagaggaggattcttctaag
aagtctttaaagagtaagaagccacagcagatactgttgcctgaaaagataagtgaacag
ctggctttgttggagacacacctcctcaaactgacaaagcaatatgttacatctgaactc
tcaggaggagaagaccctatatttctttatcctgtagttttgaattggtctgtcaaaggt
gccgtgaaagaagttatgaaatttaagcaaaaaccaagatttctggaattctttacacaa
gttatgctaaaatgcatgaatgaggaaaaatttcaccttatggtagagataacaattcct
gtccatgacttcttgaaaaggagaaatgagtctctacttgaaattaaaaaagtgaaatat
aaggacagtacttcaaataaaaaagcaaacaaatctttaaagttcaaagctgccgtaatg
gaaattggaagaagtgcagaaatgcaacaaagaatgagaagtaaaaaaaaggaaactcta
agagatctcattttaaaaaatccagctatttctgaaatgatggcacatgaaagaaataag
ggagccagtgttagaaaagcagcacagcgatacctgatggattacttgaatcctctaata
tcaagttatattaaaagaaagaggttccatcgtttttctcttgaagagatgccctggaga
gctcagatgaacctgtatctagcaggcgcacacttcaacctggttttacaaaagctgggg
gagcatgcaaagatgaaatctggcacttcacatatgatggtcagtttcagatcatgtgat
cctaacatattctcactctataattcaggaacagtattaccaacaagaaaattgactgta
gaaaattataaagcaatgcttgatttccttcttacagccaaaaaaagaaaggccaattta
ccatcagatgctgaagaattttctacatttattaattccaaaatgagtgatgaaaatatg
tccaagatacaaacggtttacgactcagactctcaatcaggttctagtgctaaagaaaag
gatcgaggagcaaatttgtgtgtaatggatcattttatgaaaatctttttatactgcagg
agagcaatggttcttgctcatcgtggtggctattggactctgcttcagaattgctgtcgg
gccttttggaactttactcaggaactacaaatacttctgaaacagggagtggatatttat
aaaacatttcctattagccaagatgatttcctctgcacctctgttttgccattctatttg
ggagcagaattacttattgacatgctaataagactacaaaataccaattctattaagcct
gttgaagacaaaggagaattcagtgatccaagttgttacgggaatattaaaaatgataac
ggtggttctagtcttatatttgagcatcctttagatgatgtaaatgtggttgatttgaaa
tggatccacgactttgctttaaaatccctggaagttttatatcaagtggaaaaatgggaa
acactagtatcgcttgccattcagttcaatacaatttcacatgagaggtatacagaacaa
gtgacaccactcctggtgtatgcacagcgccagcttctgctgagaatacacaagttcaag
ggcccagatattactcaacaaccttgtgcaaggtatgaggctgaatatggagagaagata
acctgccgaaattttgttgggaagcaacttaagattaattcttcaaccactgaagaaaca
agcaactgcacagatttactaaaaatgctcatctattcagaatacagccgagccaaagca
cttgtctgcgtgcccgtggatgtgacagacaccttgaggtgttttagagagacactggaa
aaatccaaataccataacagatcaattcgacacagcagaaagttgctttcattatttctt
gcacagacacaaggggagagaggaggaataaacaattccacatgtacttctggaagggtg
gaattttgcctggggacagaggagatgcatatgtcaataccccctgacctttctcaggag
cacttcagggtttttagttccgtggagaaaagcaaacttccatattcacaacttggactc
gtaatttcttcttatcaccagactattgatgttctccaagccagtaatcaaagaagtctt
aaagttcaggcgttgcattcacttggaagtcttctcatctttgcagaaaagaaaagggct
gcttttaagtgttggtgtcaagctcttgatgacatattcagaaaaccagacgtgctgcac
acatggaaagagtttggcccctcactcaccaatgtcaccgacagccattcacctctgggt
ttcaaagactacagtgaggagtttctgtcaaaagttggcatctgggggtgtttgcaagga
gcagtcatatcagccaagatagcacaatttattcagtcgttgaatgttgaaaagagaacc
gactgttgcattttgtccgcattactctttcagggtttgcttagaaccacacttccacat
cccaaagcggaacgttgctatgctcaatatgaaatcactcaacttctcccaggcatcgaa
ctcttctcagatagatacagggctgacatttgctctgtagttgcaagtctgtattacatt
atacgtgaactgcactttgttaggcaaaacctaatagttctgcctctccttgcattgtac
caatattttgtttctggaatttgtcaagacttaatcagaaatctagaagcaagaatcctc
aagatagaagtccttatagatttgagattcttttctgaagccttttatgagatatcccag
attttctatggaagaaacatgccttgttcaatacctgcaggctataaagctgctggaaaa
atgaagctatttcaatcatttgactcagggaaacctcttaccagtaaagaaaatatacag
gcaattgatgaattaagaaataaaggcttgcctgccattctggttacaattggccaaccg
catctcttaaataagttttattttgttaaagcatactttttcctaagtgtggctgcaaca
ataaattgtgtcccagaaaataaactgcaaacagtaattactgacaggagcaaaccaaac
ctaccaaacttgaaagagataaactcaaaagatgatggaggttcattttatcatcttacg
aacaatgaggtcactcttagcatgctaaagtcaactttactaatggaagctgaggacaga
ctaaacttccttttgtcggaggtggaacatccagggctcaagaccctgtctcagtgctct
gttggcgagctggagattgtggtggaggccaggcttcagctggctgcagttgctctgcag
aggcaccgggccgcatacagtgctgcaatagtgttttctacacttacacttctccaggat
tcaaaactttttcaaaagaaagtagtacaggaggacacagagaatcccgtctctccagga
acatctgccactgaaaagaaagatgacaatgagtttttagatcctatttccctaaacgcc
cgagaatatttcaacattcatctgtggttgaggtgccgcttagcactggtgactgcgttt
gttgcacagattcatggcattggaattgtaaaagaggatgatatgacagattgcctgagc
ctcatcaatgaagtgtgtatggaggcaaaaagtgcaggtgacacggaactgcaggctgaa
ttattgacgcaagctgtaattcttggcctacaagaaaagcatttaaaggcggacatcata
acaaaacttcaggatataatacatttgctggaaggaaatgaatatatttctcctcaatcg
tggctaactctggcaagaagccttgttttgctggatgacttaaccaaagctgagaaattc
aaggaatctcccttttcaaaaacaggaaaattaaattcgttgactcaggctcacagtatt
ctaactgaacagatgctaacttttggagaaacaattgaatttccttcatcaaacactaaa
tatgcaaatccattagagcctttgaaaaatatctatcttccccatgtcatgttattggcc
aaaataaaaatgagaattggacacacaatggccaagcaagtatattataacaataaaagg
aaggacccttcgaagtggttgcctgctcttcatctgtttgatgtggcactgaagctctgc
aaaacaacagcagccgaggaaccggaggtggaagctgaaatcctttttcagaaaggcaaa
atagaacgtcaaatactaatggaagagaaatctccaagttttcaacttgagagtttatat
gaagctatacaactaagcctgaataatgatcaaaactcaggattgataagagactcctac
ctagaaatggctctattgtattttcatctgaagaagccaaaaagaaatatttctggatca
ccattaacacttaagtctcctctcagaagaagtagttctgttaaagaaacagcagcaagt
aaatttgaaatgtacagttcattagcctggattgcaataagagctgctgcacaggtcagt
gaagctgtgctggcaattaacctacttatgggaaagaagaatattagaacccataaagtt
aaccaactggcattatcaaatatcccagaatttgctgctctggatcttttgtcttcatat
acagattacttgcttgataactaccaagtcgtcttccagacttcctgtacatttttgtac
caaaatgatgatgtgtatgacagcacagatggtagaaaaaagactcagaccaaagtagat
attacatggatccttctcctgcgctactatatccaccttcagaggattaataatctcagc
aaactgctagcatctgcaacaccagtttctggaatttctttgccagatgatacacttctc
acatccctttacaactctgagttgattttgcgccagaaagaagtacattatttccttaaa
aaattcttacagctgtattcttcttcttcaattgatgaatttccaaaagaacttctttgt
ctggaaaatccccctctttcagaaaaagacttacgtgaatcatcagccaagttgtatcgt
gacagttctctacaatccattttatcctttaagcctgtttcgagctcatcttgtatggac
ataatgccaatagaaatggtaacacaagcttcaaacaaagaactttgctttcagtggtac
attcctcctctggacagccctcccaaggagacagaacctatggttttattgttgtatgca
tataatttgaagcctctgaagatttcagatgttagacattgcacttttaacaatgtatgt
gctggctctttatggattccactgaacagggttattgctattcatgagaaattatctaat
ctcgtacaaatagctgaaatatcattgccagcagctcctgaaattaccttaaatgaaaat
gtacatgaaataggagacggggaagagaaatcagttgataatgaaatggaagacatgatt
attcagtgttgttctgaaatagcatctctgtttttgaatgataaagagtcaacaccactg
tctgaggtcccatttgatatctcgctgccatctatattcagtcttgagagactgtttgat
ctggctaatggttgcattttaccaggaggaagccttttcagctggatagtgtcaattatt
ccctga
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