Callithrix jacchus (white-tufted-ear marmoset): 100401095
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Entry
100401095 CDS
T03264
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100401095 (KDM1B)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100401095 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
Pyr_redox
SWIRM
Thi4
DAO
HI0933_like
FAD_binding_3
Pyr_redox_3
Lycopene_cycl
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_9
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
KARI_N
Attractin
TrkA_N
YjeF_N
Shikimate_DH
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
100401095
NCBI-ProteinID:
XP_035150694
Ensembl:
ENSCJAG00000006934
UniProt:
A0A8I3X5I2
LinkDB
All DBs
Position
4:complement(11165321..11271159)
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AA seq
923 aa
AA seq
DB search
MGRAERAPRLKRRRGPNPSLVPPAPPTPGHAVTGAEAAAAVAAAERSLGLAARLLPSCAR
GARLRRGACNPGQRAQPRRRSELCLFPETPGTSSAQRLFNVMATPRGRTKKKAPFDHSPD
SLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTATYPVCFASASERCAKNGYT
SRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKVWTSNGKTEPSPKAFMADQQLPYW
VQCTKPECGKWRQLTKEIQLTPQIANTYRCGMKPNTAVKPETSDHCSLPEDLRVLEVSNH
WWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRTATTGNASPGKLEHSKAAPS
VHVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDPTMYLALRNLILALWY
TNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLNVGADQYLLPKD
YHNKTVIVIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIV
NGCINNPMALMCEQLGISMHKLGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRK
DKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSW
DHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLQSPVQSIDYSGDEAQVTITDGTGYS
AQKVLVTVPLALLQKGAIQFNPPLPEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGAD
FFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCVATLRE
LFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEEIQGTIFFAGEATNR
HFPQTVTGAYLSGVREASKIAAF
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggcggagcgagcgccgcggctaaagcgaaggcggggacccaacccatccctg
gtcccgccggctcctcccaccccgggtcacgccgtgacaggggcggaagcggcggcggcg
gtggcggcggccgagaggagcctggggctcgcggcgcggctcctgccgtcctgtgcgcgc
ggcgcgcggctccggagaggcgcctgcaatcctgggcagcgcgcacagcctcgccggcgc
tcagagctgtgccttttccccgagactcccggcacctcctcagcgcaaagattatttaat
gtaatggcaaccccacgggggaggacaaagaaaaaagcaccttttgatcactctccagat
agccttcctttaaggagctccgggaggcaggcgaagaagaaagcaacagagacgacagat
gaggatgaagatggtggatcagagaagaagtacaggaaatgtgaaaaggcaggctgcaca
gcgacatatcctgtgtgctttgcaagtgcttctgaaagatgtgccaaaaatggctacacc
tcccgatggtatcacctctcctgtggggaacatttctgcaatgaatgctttgaccattac
tacagaagccataaggatggatatgataaatatactacatggaaaaaagtatggactagc
aatggcaaaactgaacctagtcccaaagctttcatggcagaccagcaactcccctactgg
gttcagtgtacgaaacctgagtgtggaaaatggaggcagctcaccaaggaaatccagctt
actccacagatagccaatacttatcgatgtggtatgaaaccaaatactgctgtgaagcct
gagacctcagatcattgttccctcccagaggatctaagagttttggaagtttccaaccat
tggtggtactctatgctcatcctacctcctttgctgaaagacagcgtggcagcgcccctg
ctgtctgcctactaccctgactgcgttggcatgagcccctcctgcaccagcacacaccgc
actgctaccactggcaatgccagccctgggaaactggagcactccaaggctgccccctcc
gtgcatgttccaggcatgaaccgatacttccagcctttctaccagcccaatgaatgtggc
aaagccctctgtgtgaggccggatgtcatggaactggatgagctctatgagtttccagag
tattcccgagatcccaccatgtacctggctttgagaaacctcatcctcgcgctgtggtat
actaactgcaaagaagctcttactcctcagaaatgtattcctcacatcattgtccggggt
ctcgtgcgtattcgatgtgttcaggaagtggagaggatactgtattttatgacgaggaaa
ggtctcatcaacacaggcgttctcaacgtgggagccgaccagtatcttctccctaaggac
taccacaataaaacagtcattgttatcggggctggtccagcaggattagcagctgcgagg
caactgcataactttggaattaaggtgactgtcctggaagccaaagacagaattggaggc
cgagtctgggatgacaaatcttttaaaggcgtcacggtgggaagaggagctcagatagtc
aatggctgtattaacaacccaatggcattaatgtgtgagcaacttggcatcagcatgcat
aaattgggagaaagatgtgacttaattcaggaaggtggaagaataactgaccccactatt
gacaagcgcatggattttcattttaatgctctcttggatgttgtctctgagtggagaaag
gataagactcagctccaagatgtccctttaggagaaaagatagaagagatctacaaagcg
tttattaaggaatctggtatccagttcagcgagctggagggacaggtgctccagttccat
ctcagtaacctggagtatgcctgtggcagcaaccttcaccaggtatctgctcgctcctgg
gaccacaatgaattctttgcccaatttgctggtgaccacaccttgctaacccccgggtac
tcggtgataattgagaaactggcagaagggctggacattcggctccagtctccagtgcag
agtattgattattctggagatgaagcgcaggtcaccattacagatggcacagggtattct
gcacaaaaggtattagtcactgtaccactggctttactacagaaaggtgccattcagttt
aatccaccgctgccagagaagaagatgaaggctatcaacagtttaggtgcaggcatcatt
gaaaagatcgccttgcaatttccatatagattttgggacagtaaagtgcaaggggctgac
ttttttggtcatgttcctcccagtgccagcaagcgagggctttttgctgtgttctatgac
atggacccccagaagaagcacagcgtgctgatgtctgtgattgccggggaggctgttgca
tccgtgagaaccctggatgacaaacaggtgctgcagcagtgcgtggccacgctccgggag
ctgttcaaggagcaggaggtcccagatcccacaaagtattttgtcactcggtggagcaca
gacccatggatccagatggcatacagttttgtgaagacaggtggaagtggggaggcctac
gatatcattgctgaagaaattcaaggaaccatctttttcgctggtgaggcaacaaacagg
catttcccacaaactgttacaggggcatatttgagtggtgttcgagaagcgagcaagatt
gcagcattttaa
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