KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100401106
Entry
100401106         CDS       T03264                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04512  ECM-receptor interaction
cjc04514  Cell adhesion molecules
cjc04820  Cytoskeleton in muscle cells
cjc05205  Proteoglycans in cancer
cjc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100401106 (SDC4)
   04514 Cell adhesion molecules
    100401106 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100401106 (SDC4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100401106 (SDC4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100401106 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cjc00535]
    100401106 (SDC4)
Proteoglycans [BR:cjc00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   100401106 (SDC4)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 100401106
NCBI-ProteinID: XP_002747690
Ensembl: ENSCJAG00000017524
UniProt: A4K2U8
LinkDB
Position
5:complement(38675525..38698249)
AA seq 198 aa
MASARLFALLLLFVGAAAESIRETEVIDPQDLLEGRYFSGALPDDEDVVGPGQEPDDFEL
SGSGDLDDLEDSKMGPKVIHPLVSLDNHIPERAGPGSQVPAEPKKLEENEVIPKRISPFE
EGEDVSNKVSMSSTVQGSSIFERTEVLAALIVGGIVGILFAVFLILLLVYRMKKKDEGSY
DLGKKPIYKKAPTNEFYA
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcctccgcccgtctgttcgcgctgttgctgctcttcgtaggcgccgccgccgagtcg
atacgagagactgaggtcatcgacccccaggacctcctagaaggccggtacttctctgga
gccctaccagacgatgaggatgtagtggggcctgggcaggaacctgatgactttgagctg
tctggctctggagatctggatgatttggaagactccaagatgggccctaaagtgatccat
cccttggtgtctctagataaccacatccctgagagggcagggcctgggagccaggtaccc
gccgaacccaagaaactggaggagaatgaggttatccccaagaggatctcaccctttgaa
gagggtgaggatgtgtccaacaaggtgtccatgtccagcactgtgcagggcagcagcatc
tttgagagaacagaggtcctggcagctctgattgtgggtggcatcgtgggcatccttttt
gccgtcttcctgatcctgctgctggtataccgcatgaagaagaaggatgaaggcagctat
gacctgggcaagaaacccatctacaagaaagcccccaccaacgagttctacgcgtga

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