Callithrix jacchus (white-tufted-ear marmoset): 100401238
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Entry
100401238 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04137
Mitophagy - animal
cjc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100401238
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100401238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100401238
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
100401238
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100401238
Multi subunit type E3
ERAD complex
100401238
LMBR1L-GP78-UBAC2 complex
100401238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
CUE
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
MRAP
Motif
Other DBs
NCBI-GeneID:
100401238
NCBI-ProteinID:
XP_054107495
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All DBs
Position
X:complement(60530184..60539582)
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AA seq
537 aa
AA seq
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MFGPLRVSEREHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLSFAGLVFLHLMVQLC
KDQFEYLSFSPTTPMSSHGRVPSLLVAVLLSCCGLAAVCCITGYTHGMHTLAFMAAESLL
ETVRTAHLILRYVIHLWDLNHKGTWEGKGTYVYYTDFIMELTLLFLDLMHHIHMLLFGNI
WLSMASLVIFMQLRYLFHQVQRRIRRHQNSLRVVGNMETRFAVATPEGLAVNNDDCAIXW
DSMQAARKLPCGHLFHNSSLRSWLGQDTSCPTCRMSLNIANNNRVREDHQGENLDENLVP
VAAAEGRPRLNQHNHFFRFDGSRIASWLPSFSVEVMHTTNIIGIMQASNSQLNAMVHQIQ
EMFPQVPYHLVLQDLQLTRSVEITTDNILEGQIQVPFPTQRSDSIRPALNSSVERPSSDQ
EEGETSAQTECVPLDLNPHLEETLDFGELEMELSEVEDFEARGSHFFRSADERQRMLVQR
KDELLQQARKRFLNKSSEYDVASESFLASDGASSDPATXRRMLAATTEWRLQKQQAS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccctcttcgggtgagtgagagagagcatctcaaagacaaattttggaatttt
attttctacaagttcattttcatctttggtgtgctgaatgtccagactgtggaagaggtt
gtcatgtggtgcctctcgtttgctggacttgtctttctgcacctgatggttcagctctgc
aaggatcaatttgagtatctttccttctcgcccaccacacctatgagcagccatggtcga
gtcccgtctctgttggttgccgtgctgctttcctgctgtggactggcggctgtttgctgc
atcactggctacacccatggaatgcacaccttggctttcatggctgcagagtctcttctt
gagacagtgaggactgctcatttgattttacggtatgtaattcacctctgggacctcaac
cacaaagggacgtgggaaggaaaggggacatacgtctattacacagatttcatcatggag
ctcactctcttgttcctggacctcatgcaccacattcacatgttgttatttggcaacatc
tggttatccatggccagcctggtcatctttatgcagttgcgttacctgtttcatcaggtg
cagcgtcgaattcgtcggcaccagaactctctgcgtgtggttgggaacatggagaccagg
tttgcagttgcaactccagaggggctggctgtcaacaatgacgactgtgccattncctgg
gactccatgcaggctgcacggaaactgccctgtggacatctcttccacaactcctctctt
cgttcctggctaggacaagacacctcctgtccaacatgcagaatgtctcttaatatcgcc
aacaataatcgtgtcagggaagaccatcaaggagagaacttggatgagaatttggttcct
gtagcagcagccgaagggagacctcgcttaaaccaacataatcacttcttccgtttcgat
gggtctcggattgcgagctggctgccgagtttttcagttgaagtgatgcacacaactaac
attattggcattatgcaggccagcaactcccagctcaatgcaatggttcatcagattcaa
gagatgtttccccaggttccataccatctagtgctgcaggacctccagctgacacgctca
gtggaaataacaacagacaacattttagaaggacagatccaagtaccttttcctacacag
cggtcagatagtatcagacctgcattgaacagttccgtggaaaggccaagcagtgaccag
gaagagggagaaacttctgctcagaccgagtgtgtgccgctggacctcaatcctcacctg
gaggagacactggactttggtgagttggaaatggagctcagcgaggttgaagacttcgag
gcccgtgggagccacttcttcaggtctgctgatgagagacagcgcatgctggtgcagcgt
aaggatgagctcctccagcaggctcgcaagcgtttcttgaacaaaagttctgaatatgac
gtagcctcagagagcttccttgcctcagatggtgcgtcctccgaccccgccaccnctcga
aggatgctggctgccaccacggaatggaggcttcagaagcagcaggcctcctag
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