Callithrix jacchus (white-tufted-ear marmoset): 100401295
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Entry
100401295 CDS
T03264
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100401295 (MMS19)
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100401295 (MMS19)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100401295 (MMS19)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100401295 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
HEAT
Motif
Other DBs
NCBI-GeneID:
100401295
NCBI-ProteinID:
XP_009008344
Ensembl:
ENSCJAG00000016651
UniProt:
U3C261
LinkDB
All DBs
Position
12:complement(86928883..86970776)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAAAAALEAAAPTDALWGLVHDFVMGQQEGPADQVAADVKSGNYTVLQVVEALGSSLENP
EPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLKALSLCV
ALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYNIITNFMRTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPYGIQRED
LILSLRSVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYRQKELKDFLPS
LWASIRREVFQTASERVEAEGLAALHSLTVCLSRSVLSADAEDLLDSFLSNILQDCKHHL
CEPDMKLVWPSAKLLQAAAGASARACDYITSNVLPLLLEQFHKHSQSSQRRTILEMLLGF
LKLQQKWSYEDKDQRPLNGFKDQLCSLVFMALTGPSTQLQLVGIHTLTVLGAQPDLLSSE
DLELAVGHLYRLNFLEEDSQSCRVAALEASGTLAALYPVAFSSHLVPKLAEELRVGESDL
TRGDGPTQCSRHLCCLQALSAISTHPSIVRETLPLLLQHLCQVNKGNMVARSSDVIAVCQ
SLKQVAEKCQQDPDCCWYFHQTAIPCLLALAVQASMPEKEPSVLRKVLLEDEVLAAMVSV
IGTATTHLSPELAAQSVTHIVPLFLDGNVSFLPENSFPSRFQPFQDGSSGQRRLVALLMA
FVCSLPRNVEIPQLNQLMRELLELSCCHSCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQL
AVDKVEAGLGSGPCRSQAFTLLLWVTKALVLRYHPLSSCLTTQLMGLLSDPELGPAAADG
FSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAAPQGVKPNYLKGLSHVLN
RLPKPVLLPELPTLLSLLLEALSCPDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFL
NLTSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEAVSARG
EWFLLGSPGS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcggctttggaggcggcggcgcctacagacgccctatggggcctcgtg
cacgacttcgtcatgggtcagcaagagggccccgctgaccaggtggctgcagatgtgaaa
tctggcaactatacagtgttacaagttgtggaagcccttgggtcctctctagagaatcca
gaaccccgaactcgggcacgaggaatccagcttttgtcacaggtgctgctccagtgtcac
tccttgctcctggagaaggaagtggtacacctgatactgttctatgagaaccggctgaag
gaccatcatcttgtgatcccatctgtcctgcagggtttgaaggcacttagcctgtgtgtg
gccttgcccccagggctggctgtttctgtgcttaaagccatcttccaggaagtgcatgta
cagtccctgccacaggtggaccgacacacagtctacaatatcattaccaattttatgcga
acccgggaagaagagctaaagggcctaggagctgacttcacctttggcttcatccaggtg
atggatggggaaaaggatcctcgtaatcttctggtggccttccgcatcgtccatgacctc
atctccagggactatagcctgggaccctttgtggaagagttgtttgaagtgacatcctgt
tatttccctatcgattttacccctccacctaatgatccctatggtatccagagagaagac
ctcatcctgagtcttcgaagtgtgctggcttctacaccgcgatttgctgagtttctgctg
cccctgctgattgagaaagtggattctgagattctgagtgccaagttggattctctacag
acgctgaatgcttgctgtgctgtgtacagacagaaggaactgaaggacttcctccccagc
ctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtggaggcagag
ggcctggcggccctccactccctgacagtgtgtttgtctcgctctgtgctgagtgctgat
gctgaggacctccttgactccttccttagcaacattttacaagactgcaagcaccacctg
tgtgagccggacatgaaactggtgtggcctagtgccaagctgttgcaggcagctgcaggt
gcatctgcccgggcctgtgactatatcaccagcaacgtactacctttactgctggaacag
ttccacaagcacagtcagagcagccagcggcggacaatccttgaaatgctcctgggtttc
ttgaagctgcagcagaaatggagctatgaagacaaagatcaaaggcctttgaatggcttc
aaggaccagctgtgctcactggtattcatggccctaacaggccccagcacccagcttcag
cttgttggcatccatacactcacagtcttgggtgcccagccagatctcctatcttctgag
gacttggagctggcagtgggtcacctgtatagactgaacttcttggaggaggactcccag
agttgcagggtggcagcactggaagcatcaggaaccctggctgctctctaccctgtggcc
ttcagcagtcacctagtacccaagctcgccgaggagctgcgtgtaggggagtcagatttg
actagaggtgatgggcctacccagtgctcccggcatctgtgctgtctgcaagccttgtca
gctatatcaacacatcccagcattgtcagggagacactgcctctgctgctgcagcatctc
tgtcaagtgaacaaagggaatatggttgcacgatccagtgacgttattgctgtctgtcag
agcctcaaacaggtggcagaaaaatgtcagcaggaccctgattgctgctggtatttccac
cagacagctataccttgcctgcttgccttggctgtgcaggcctctatgccagagaaggag
ccctcagttctgagaaaagtactattggaggatgaggtcttggctgccatggtgtctgtc
attggcactgctaccacccacctgagccctgagttagctgcccagagtgtcacacacatt
gtgcctctcttcttggatggcaacgtctcctttctgcctgaaaacagcttcccgagcaga
ttccagccattccaggatggctcctcagggcagaggcggctggttgcactgcttatggcc
tttgtctgctccctccctcgaaatgtggaaattcctcagctgaaccaactcatgcgggag
cttttggaactgagctgctgccacagctgccccttttcttccaccgctgctgccaagtgc
tttgcaggactcctcaacaagcaccctgcagggcagcagctggatgaattcctacagctg
gctgtggacaaagtagaggctggcctgggctctgggccctgtcgtagtcaggccttcact
cttcttctctgggtaacgaaggccctagtgctcagataccatcctctcagctcctgcctt
acaacccagctcatgggcctcctgagtgacccagaattaggtccagcagcagctgatggc
ttctctctgctcatgtctgactgcactgatgtgttgactcgtgctggccatgctgaagtg
cggatcatgttccgccagcgcttcttcacagataatgtgcctgctttggtccagggcttc
catgctgctccccaaggtgtgaagccaaactacttgaagggtctttctcatgtacttaac
aggctgcccaagcctgtgctcttgccagagctgcccacacttctttccttgctgctggag
gccctgtcctgccctgactgtgtggtacagctctctaccctcagctgccttcagcctctt
ctactggaagcaccccaagtcatgagtcttcacgtggacactctcgtcaccaagtttctg
aacctcacctctagcccttccatggccgtccggatcgccgcactgcagtgcatgcatgct
ctcactcgcttgcccacccctgtgctgctgccatacaaaccacaggtgatccgagcctta
gccaaacccttggatgacaagaagagactggtgcgcaaggaagcagtgtcagccagaggg
gagtggtttctgttggggagccctggcagctga
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integrated database retrieval system
