Callithrix jacchus (white-tufted-ear marmoset): 100401323
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Entry
100401323 CDS
T03264
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100401323 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100401323 (DDX41)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100401323 (DDX41)
Spliceosome [BR:
cjc03041
]
Complex C
Other components
Complex C specific factors
100401323 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100401323
NCBI-ProteinID:
XP_017825033
Ensembl:
ENSCJAG00000006595
UniProt:
U3F2W6
LinkDB
All DBs
Position
2:65401692..65408562
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AA seq
622 aa
AA seq
DB search
MEESEPERKRARTDEATAGGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcggaacccgagcggaagcgggctcgcaccgacgaggcgactgccggagga
agccgctccgaggcggaggatgaggacgacgaggactacgtgccttatgtgccgttacgg
cagcgccggcagctactgctccagaagctgctgcagcgaagacgcaagggagctgcggag
gaagagcagcaggacagtggcagcgaaccccggggtgatgaggacgacatcccgctgggc
cctcagtccaacgtcagcctcctggatcagcaccagcaccttaaagagaaggctgaagcc
cgcaaagagtctgccaaggagaagcagctgaaggaagaagagaagattctggagagtgtg
gctgagggccgagcattgatgtcagtgaaggagatggctaagggtatcacatatgatgac
cccatcaaaaccagttggactccgccccgttatgtcctgagcatgtctgaagagcgacat
gagcgtgtgcggaagaaataccacatcctggtggagggagacggtatcccaccacccatc
aaaagcttcaaggaaatgaagtttcctgcagccatcctgagaggcctgaagaagaaaggc
atccaccacccaacacccattcagatccagggaatccctaccattctatctggccgtgac
atgataggcatcgccttcacgggttcaggcaaaacactggtgttcacattgcctgtcatc
atgttctgcctggaacaagagaagaggctacccttctcaaagcgcgaggggccctatgga
ctaatcatctgcccctcacgagagctggcccggcagacccatggcatcctggagtactac
tgccgcctgctgcaggaagacagctcaccactcctgcgctgcgctctctgcatcgggggc
atgtccgtgaaagagcagatggagaccatccgacacggtgtgcacatgatggtggccacc
ccaggacgcctcatggatttgctgcagaagaagatggtcagtctagacatctgtcgctac
ctggccctggatgaggcagaccgcatgattgacatgggctttgagggcgacatccgcacc
atcttttcatacttcaagggccagcggcagaccctactcttcagtgccaccatgccgaag
aagattcagaactttgctaagagtgcccttgtaaagcctgttaccatcaacgtggggcgc
gctggggctgccagcctggatgtcatccaggaggtggaatatgtgaaggaggaggccaag
atggtgtacctgctcgagtgcctgcagaagacacccccacctgtgctcatctttgcagag
aagaaggcagatgtggacgccatccacgagtacctgctgctcaagggggttgaggctgta
gccatccatgggggcaaagaccaagaggaacggactaaggccattgaggcattccgggag
ggcaagaaggatgtcctagtagccacagatgttgcctccaagggcctggacttccctgcc
atccagcacgtcatcaattatgatatgccagaggagattgagaactatgtacaccggatt
ggccgcactgggcgttcaggaaacacaggcattgctaccaccttcatcaacaaagcctgt
gatgagtcagtgctgatggacctgaaagccctgctgctggaagccaagcagaaggtgcca
ccagtgctgcaggtgctgcactgtggggacgagtccatgctggatatcggaggagagcgt
ggctgtgccttctgtgggggcctgggccatcggatcaccgactgccccaaacttgaggct
atgcagaccaagcaggtcagcaacatcggccgcaaggactacctggcccacagctccatg
gacttctga
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