Callithrix jacchus (white-tufted-ear marmoset): 100401442
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Entry
100401442 CDS
T03264
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03440
Homologous recombination
cjc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100401442 (TOP3B)
03460 Fanconi anemia pathway
100401442 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100401442 (TOP3B)
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100401442 (TOP3B)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100401442 (TOP3B)
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Topoisomerases
100401442 (TOP3B)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100401442 (TOP3B)
FA (Fanconi anemia) pathway
100401442 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
100401442
NCBI-ProteinID:
XP_002743624
Ensembl:
ENSCJAG00000020334
UniProt:
F7ADD1
LinkDB
All DBs
Position
1:complement(190998487..191058265)
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AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGSLSSHKGLNGACSVHEYTGTFAGQPVRFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKAHGGEKTVFRARFSSITDTDICNAMACLGEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNTDKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHAMQTAERLYTQGYISYPRTETTHYPENFDLKGALRQQANH
PYWADMVKRLLAEGINRPRKGHDAGDHPPITPMRSATEAELGGDAWRLYEYITRHFIATV
SHDCKYLQSTISFRIGPELFTCSGKTVLSPGFTEIMPWQSVPLEESLPTCQRGDTFTVSE
VKMLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPSCQHSLSM
LGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCFENAHRVRVSADTCSVCEAALLD
VDFNKAKSPLPGDETQHMGCVFCDPVFQELVELKHAASCHPMHRSGPGRRQGRGRGRARR
PPGKPNPRRPKDKMSALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtgctcatggttgctgaaaagccatccttggcgcagtcaattgccaaaatc
ctctctagagggagcctgtcctcacacaaagggctgaatggagcctgctcagtccatgag
tacactgggacctttgctggccagccagtgcgcttcaagatgacatctgtctgtggtcac
gtgatgaccctggatttcctgggaaaatacaacaagtgggacaaagtagaccccgcagag
ctgttcagccaagctcccacggaaaagaaagaagctaaccccaagctgaacatggtgaag
ttcctgcaggtggagggcagaggctgcgactatattgtgctgtggctggactgcgacaag
gagggggagaacatctgctttgaggttcttgatgctgttctgcccgtcatgaacaaggct
catggcggcgagaagaccgtgttccgggccaggtttagctccatcacggacacagacatc
tgtaatgccatggcctgcctgggcgagcctgaccacaacgaggcactctcagtggatgct
cgccaggagctggacctgcgcatcggctgtgcattcaccaggtttcaaactaaatatttc
caggggaaatacggtgatttagacagctctctcatctcctttgggccatgtcagactcca
accctgggattctgcgtggagagacatgataaaatccagtccttcaaaccagagacctac
tgggtgctgcaggccaaggttaacactgacaaagacagatctctccttttggactgggac
cgagtaagagtgttcgaccgggagatcgcacagatgtttttaaacatgacaaagctggag
aaggaagcccaggtggaggccacaagcaggaaagaaaaggccaagcagaggcctctggcc
ctgaacactgtggagatgttgcgtgtagccagctcttctctgggcatgggaccacagcac
gccatgcagacagccgagcggctctacacacaaggctacatcagctacccacgtacagag
accacccactaccctgagaactttgacctgaagggtgctctgcggcagcaggccaaccac
ccctactgggctgacatggtaaagcggttgttagcagaaggtatcaaccgcccacggaaa
ggccacgatgccggcgaccatccccccatcacccccatgaggtctgccacagaagctgaa
ttagggggtgacgcatggcggctctacgaatacatcaccagacatttcatcgccacagtc
agccatgactgcaagtacctgcagagcaccatctccttcaggattgggccagagctcttc
acctgctccgggaagaccgtcctctcaccaggcttcacggagattatgccctggcagagc
gtgcccctggaggagagcctgcccacctgccagcggggtgacaccttcactgtgagtgag
gtaaagatgctggagaagcagacgagcccacccgactacctgacggaggctgagctcatc
acgctcatggagaagcacggcatcggcacagatgccagcatccctgtgcatatcaacaac
atctgccagcgcaactatgtcaccgtggagagcgggcgccggctcaaacccaccaacctc
ggcattgtcctggtgcacggctactacaagattgatgcagagctagtgctccccaccatc
cgaagtgcagtggagaagcagctgaacctgatcgcccagggcaaggccgactaccgccag
gtcctgggccacaccctggacgtgttcaagaggaagttccactactttgtcgactccatt
gcaggcatggatgagttaatggaggtgtctttctcacccctggcggccacaggcaagccc
ctgtcacgctgcgggaagtgccaccgcttcatgaagtacatccaggccaagccaagccgc
ctgcactgctcccactgtgacgagacttacacactcccccaaaatggcaccatcaagctc
tacaaggagctccgctgccctctggacgactttgagctggtcctgtggtcatcaggctct
cggggcaagagctacccactgtgcccctactgctacaaccacccacccttccgagacatg
aagaaaggcatgggctgcaatgaatgtacacacccctcctgccagcactcgctgagcatg
ctgggcatcggccagtgcgtggaatgcgagagtggggtactggtgctggaccccacctcg
ggccccaagtggaaggtagcctgcaacaagtgcaacgtggtggcgcactgctttgagaac
gcccaccgtgtgcgggtgtccgccgacacctgcagtgtctgtgaggccgccttgcttgac
gtggacttcaacaaggccaagtccccactcccgggtgatgagacacagcacatgggctgc
gtcttctgtgaccccgtcttccaggagctggtggagctgaagcatgcagcctcctgccac
cccatgcaccgcagtggaccagggaggagacagggtcgagggcggggccgggccaggagg
ccccctgggaagcccaaccccaggcggcccaaggacaagatgtcagccctggccgcctac
ttcgtatga
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