Callithrix jacchus (white-tufted-ear marmoset): 100401480
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Entry
100401480 CDS
T03264
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100401480 (DDX39A)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100401480 (DDX39A)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100401480 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100401480
NCBI-ProteinID:
XP_035140854
Ensembl:
ENSCJAG00000004760
UniProt:
U3EPE3
LinkDB
All DBs
Position
22:complement(12846887..12872436)
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AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVMVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKSCPHVVVGTPGRILALVR
NRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaggatgtggaaaacgagcttttggattacgacgaagaggaagagccccag
gctcctcaagagagcacaccagctccccctaaaaaagacatcaagggatcctatgtttcc
atccacagctctggcttccgggactttctgctgaagccagagctcctgcgggccatcgtg
gactgtggctttgagcatccatctgaggtccagcacgagtgcattccccaggccatcctg
ggcatggacgtcctgtgccaggccaagtctgggatgggcaagacggcagtcttcgtgcta
gccactctgcaacagatcgagcccgtcaacggacaggtgatggtcctggtcatgtgccac
acaagggagctggcctttcagatcagcaaggaatatgagcgcttctccaagtacatgccc
agcgtcaaggtgtctgtgttctttgggggcctctccatcaagaaggatgaagaagtgttg
aagaagagctgtccccatgttgtggtggggaccccgggccgcatcctggcgcttgtgcgg
aacagaagcttcagtctgaagaatgtgaagcactttgtgctggacgagtgcgacaaaatg
ctggagcagctggacatgcggcgggacgtgcaggagatcttccgcctgacgccacatgag
aagcagtgcatgatgttcagcgccaccctgagcaaggacatccggcctgtgtgcaggaag
ttcatgcaggatcccatggaggtgtttgtggatgatgagaccaagctcacgctgcacgga
ctgcagcagtactacgtcaaactcaaagacagcgagaagaaccggaagctcttcgacctc
ctggacgtgctggagtttaaccaggtgatcatcttcgtgaagtcagtgcagcgctgcatg
gccctggcccagctccttgtggagcagaacttcccggccatcgccatccaccggggcatg
gcccaggaggagcgcctgtcacgatatcagcagttcaaggatttccagcggcggatcctg
gtggccaccaatctgtttggccgagggatggacattgagcgagtcaacattgtctttaac
tatgacatgcccgaggactcggacacctacctgcaccgggtggcccgggcgggtcgcttt
ggcaccaaaggcctagccatcacttttgtgtctgacgagaatgatgctaaaatcctcaat
gacgtccaggaccggtttgaagttaatgtggcagagcttccagaggaaattgacatctcc
acatacattgagcagagccggtaa
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