Callithrix jacchus (white-tufted-ear marmoset): 100401646
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Entry
100401646 CDS
T03264
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100401646 (YBX1)
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100401646 (YBX1)
03041 Spliceosome [BR:
cjc03041
]
100401646 (YBX1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
100401646 (YBX1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100401646 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
100401646 (YBX1)
Spliceosome [BR:
cjc03041
]
Common components
Common spliceosomal components
General mRNP proteins
100401646 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
100401646
NCBI-ProteinID:
XP_008999291
Ensembl:
ENSCJAG00000003155
UniProt:
U3CA08
LinkDB
All DBs
Position
7:76393150..76414697
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AA seq
324 aa
AA seq
DB search
MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL
GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA
EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG
QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG
YRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKAADPPAENSSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgccccccccgccgcccccgccctc
agcgccgccgacaccaagcccggcactacgggcagcggcgcagggagcggtggcccgggc
ggcctcacatcggcggcgcctgccggcggggacaagaaggtcatcgcaacgaaggttttg
ggaacagtaaaatggttcaatgtaaggaacggatatggtttcatcaacaggaatgacacc
aaggaagatgtatttgtacaccagactgccataaagaagaataaccccaggaagtacctt
cgcagtgtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcg
gaggcagcaaatgttacaggtcctggtggcgttccagttcaaggcagtaaatatgcagca
gaccgtaaccattatagacgctatccacgtcgtaggggtcctccacgcaattaccagcaa
aattaccagaatagtgagagtggggaaaagaacgagggatcagagagtgctcccgaaggc
caggcccaacaacgccggccctaccgcaggcgaaggttcccaccttactacatgcggaga
ccctatgggcgtcgaccacaatattccaaccctcctgtgcagggagaagtgatggagggt
gctgacaaccagggtgcaggagaacaaggtagaccagtgaggcagaatatgtatcgggga
tatagaccacgattccgcaggggccctcctcgccaaagacagcctagagaggacggcaat
gaagaggataaagaaaatcaaggagatgagacccaaggtcagcagccacctcaacgtcgg
taccgccgcaacttcaattaccgacgcagacgcccagaaaaccctaaaccacaagatggc
aaagagacaaaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcag
ggcggggctgagtaa
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