Callithrix jacchus (white-tufted-ear marmoset): 100401710
Help
Entry
100401710 CDS
T03264
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04151
PI3K-Akt signaling pathway
cjc04510
Focal adhesion
cjc04512
ECM-receptor interaction
cjc04518
Integrin signaling
cjc05020
Prion disease
cjc05145
Toxoplasmosis
cjc05146
Amoebiasis
cjc05165
Human papillomavirus infection
cjc05200
Pathways in cancer
cjc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100401710 (LAMC1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100401710 (LAMC1)
04518 Integrin signaling
100401710 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100401710 (LAMC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100401710 (LAMC1)
09162 Cancer: specific types
05222 Small cell lung cancer
100401710 (LAMC1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100401710 (LAMC1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100401710 (LAMC1)
05145 Toxoplasmosis
100401710 (LAMC1)
09164 Neurodegenerative disease
05020 Prion disease
100401710 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
100401710
NCBI-ProteinID:
XP_002760329
Ensembl:
ENSCJAG00000004998
UniProt:
U3CXM9
A0A5K1V711
LinkDB
All DBs
Position
18:34887198..35006859
Genome browser
AA seq
1608 aa
AA seq
DB search
MRGSQRAARTLRPRGRLWPVLAVLAAAAAGCARAAMDECTDEGGRPQRCMPEFVNAAFNV
TVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFLTDYNNQADTTWWQSQ
TMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGS
CENTYLKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQ
EWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECMKNEFD
KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRST
GHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPG
VMGDKCDRCRPGFHSLTEAGCRSCSCDPSGSTDECNVETGRCVCKDNVEGFNCERCKPGF
FNLESSNPRGCTPCFCFGHSSVCTNAVGYSAYSISSTFQIDEDGWRVEQRDGSEASLEWS
SERQDIAVISDSYFPRYFIAPAKFLGKQVLSYGQNLSFSFRVDRRDTRLSAEDVVLEGAG
LRVSVPLIAQGNSYPSETTVKYVFRLHEATDYPWRPALTPFEFQKLLNNLTSIKIRGTYS
ERSAGYLDDVTLASARPGTGVPATWVESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSPC
VLCTCNGHSEACDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSC
AVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGN
CNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNPV
TGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHPLGSTNGQCDIRTGQCECQPGIT
GQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDQCEENYFY
NRSWPGCQECPACYRLVKDKVADHRVKLQELESLMANLGTGDEMVTDQAFEDRLKEAERE
VMDLLREAQDVKDVDQNLLDRLQRVNNTLSSQISRLQNIRNTIEETGNLAEQARVHVEST
ERLIEIASRELEKAKVAAANVSVTQPESTGDPNNMTLLAEEARKLAERHKQEADDIVRVA
KTANDTSTEAYNLLLRTLAGENQTASEIEELNRKYEQAKNISRDLEKQAARVHEEAKRAG
DKAVEIYASVAQLSPVDSETLENEANNIKMEAENLERLIDQKLKDYEDLREDMRGKELEV
KNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILNNLKDFDRRVNDNK
TAAEEALRKIPAINQTIIEANEKTRDAQQALGNAAADATEAKNKAHEAERIASAIQKNAT
STKAEAERAFAEVTDLDNEVTNMLKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAEI
NARKAKNSVTSLLNIINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDL
ENEAKKQEAAIMDYNRDIEEIMKDIHNLEDIRKTLPSGCFNTPSIEKP
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtagccagcgggccgcgaggaccctgcggccccgggggcggctctggccggtg
ttggctgtgctggctgccgccgcggcgggctgtgcccgggcagccatggacgagtgcacg
gacgagggcgggcggccgcagcgctgcatgccggagttcgtcaacgccgccttcaacgtg
accgtggtggccaccaacacgtgtgggactccgcccgaggagtactgtgtgcagaccggg
gtgaccggggtcaccaagtcctgtcacctgtgcgacgccgggcagccccacctgcagcac
ggggcagccttcctgaccgactacaacaaccaggccgacaccacctggtggcaaagccag
accatgctggccggggtgcagtaccccagctccatcaacctcacactgcacctggggaaa
gcttttgacatcacctatgtgcgtctcaagttccacaccagccgcccagagagctttgcc
atttacaaacgaacgcgggaagacgggccctgggttccttaccagtactacagtggttcc
tgcgagaacacctacttgaaggcaaaccgcggcttcatcaggacaggaggggatgagcag
caggccttgtgtactgatgagttcagtgacatttctcccctcaccgggggcaacgtggcc
ttttctaccctggaaggaaggcccagcgcctataactttgacaatagccctgtgctgcag
gaatgggtaactgccactgacatcagagtaactcttaatcgcctgaacacttttggagat
gaagtgtttaacgatccgaaagttctcaagtcctattattatgcgatctctgattttgct
gtgggtggcagatgtaaatgtaatggacacgcaagtgagtgtatgaaaaacgaatttgat
aagctggtgtgtaattgcaaacataacacatatggagtagactgtgaaaagtgtcttcct
ttcttcaatgaccggccgtggaggagggcaactgcagaaagtgccagtgaatgcctgccc
tgtgactgcaatggtcgatcccaggaatgctactttgaccctgaactatatcgttctact
ggccatgggggccactgtaccaactgccaggataacacagatggcgcccactgtgagaga
tgccgggagaacttctttcgccttggaaacaatgaagcctgctctccgtgccactgtagt
cctgtgggctctctgagcacacagtgtgatagttacggcagatgcagctgtaagccagga
gtgatgggggacaaatgtgaccgttgtcggcctggattccattctcttactgaggcagga
tgcaggtcatgctcttgtgatccctctggcagcacagatgaatgtaatgttgaaacagga
agatgtgtttgcaaagacaatgtggaaggtttcaattgtgaaagatgcaaacctggattt
tttaatctggaatcatctaatcctaggggttgcacaccctgcttctgctttgggcattct
tctgtctgtacaaatgctgttggctacagtgcttattctatctcctctacctttcagatt
gatgaggatgggtggcgtgtggaacagagagatggctctgaagcatctcttgagtggtcc
tctgagaggcaagatatcgctgtgatctcagacagctactttcctaggtacttcattgct
ccagcaaagttcttgggcaagcaggtgttgagttatggtcagaacctctccttctccttt
cgagtggacaggcgagatactcgtctctctgcagaagacgttgtgcttgagggagctggc
ttaagagtgtctgtgcccttgatcgctcagggcaattcctatccaagtgagaccactgtg
aagtatgtcttcagactccatgaagcaacagattacccttggaggcctgctcttacccct
ttcgaatttcagaagctcctaaacaacttgacctctatcaagatccgtgggacgtatagt
gagagaagtgctggatatttggatgatgtcaccctggcaagtgctcgtcctgggactgga
gtccctgcaacttgggtggagtcctgtacctgtcctgtaggatatggagggcaattttgt
gagatgtgcctctcaggttacagaagagaaactccgagtcttggaccatacagtccttgt
gtgctttgcacctgcaatggacacagtgaggcctgtgaccctgagacaggtgtttgtaac
tgcagagacaatacagctggcccacactgtgagaagtgtagtgatgggtactatggagat
tcaactgcgggcacctcctctgattgccaaccctgtccgtgtcctggaggctcaagttgt
gctgttgtccccaagacaaaggaggtggtgtgtaccaactgtcctactggcaccactggt
aagagatgcgaactctgtgatgatggctactttggagaccccctgggtagaaatggccct
gtgagactttgtcgcctgtgccagtgcaatgacaacatcgatcccaacgcagttggaaat
tgcaatcgcttgactggagaatgcctgaagtgcatctataacactgctggcttctattgc
gaccggtgcaaagatggattttttggaaatcccctggctcccaatccagcagacaaatgc
aaagcctgcaattgcaatccatacggaacagtgaagcagcagagcagctgtaaccctgtg
acggggcagtgtgaatgtctgcctcatgtgactggccgggactgtggtgcttgtgaccct
ggattctacaacctgcagagtgggcaaggctgtgagaggtgtgactgtcatcccttgggc
tccaccaatgggcagtgtgacatccgcactggccagtgtgagtgccagcctggcatcact
ggtcagcactgtgagcgctgtgaggtcaaccactttgggtttggacctgaaggctgcaaa
ccctgtgactgtcatcctgaggggtctctttcactccagtgtaaagatgatggtcgctgc
gaatgcagagaaggctttgtaggaaatcgctgtgaccagtgtgaagaaaactatttctac
aatcgatcgtggcctggctgccaggaatgtccggcttgttaccggctggtaaaggataag
gttgctgatcatcgagtgaagctccaggagttagagagtctcatggcaaaccttggaact
ggggatgagatggtgacagatcaagcctttgaggatagactaaaggaagcagagagggaa
gttatggaccttcttcgtgaggcccaggatgtcaaagatgttgaccagaatttgctggat
cgcctacagagagtgaataacactctgtccagccaaattagccgtttacagaatatccgg
aataccattgaagagactggaaacttggctgaacaagcacgtgtccatgtagagagcaca
gagcggttgattgaaatcgcatccagagaacttgagaaagcaaaagtcgctgctgccaac
gtgtcagtcactcagccagaatctacaggggacccaaacaacatgactcttttggcagaa
gaggctcgaaagctcgctgaacgtcataaacaagaagctgatgacattgtacgagtggcg
aagacagccaatgatacatcgactgaggcatacaacctgcttttgaggacattggcagga
gaaaatcaaacagcatctgagattgaagagcttaatagaaagtatgaacaagcgaagaac
atctcacgggatctggagaaacaagctgcccgagtacatgaggaggccaaaagggctggt
gacaaagctgtggagatctatgccagtgtggctcagctgagccctgtggactcggaaacc
ctggagaatgaagcgaataacattaagatggaagctgagaatctggaacgcctgattgac
cagaagttgaaagattatgaggacctcagggaagacatgagagggaaggaacttgaagtc
aagaaccttctggagaaaggaaagactgaacagcagaccgcggaccaactcctagcccga
gctgatgctgccaaggccctcgccgaggaagctgcaaagaagggacggaataccttacaa
gaagctaatgacattctcaacaaccttaaagatttcgataggcgcgtgaacgataacaag
acagctgcagaggaggcactaaggaagattcctgccatcaaccagaccatcattgaagcc
aatgaaaagaccagggatgcccagcaggccctgggcaacgctgcagcagatgccaccgag
gccaagaacaaggcccacgaggcagagaggatcgcgagtgctatccaaaagaatgccacc
agcaccaaagcagaagctgaaagagcttttgcagaagttacagatctggataatgaagtg
accaatatgctgaagcaactacaggaagcagaaaaagagctgaagagaaaacaagatgac
gctgaccaggacatgatgatggcagggatggcctcacaggctgctcaagaagctgagatc
aatgccagaaaagccaaaaactctgttactagcctcctcaacatcattaatgacctcttg
gagcagctgggacagctggacacagtagacctgaataagctaaatgagattgaaggcacc
ctgaacaaagccaaagatgaaatgaaggtcagtgatcttgataggaaagtgtctgacttg
gagaatgaagccaagaagcaggaggctgccatcatggactataaccgagatatcgaggag
attatgaaggacattcacaatctggaagacatcaggaagaccttaccatctggctgcttc
aacaccccatccattgaaaagccctag
DBGET
integrated database retrieval system
