Callithrix jacchus (white-tufted-ear marmoset): 100402327
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Entry
100402327 CDS
T03264
Symbol
HDAC2
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03082
ATP-dependent chromatin remodeling
cjc03083
Polycomb repressive complex
cjc04110
Cell cycle
cjc04213
Longevity regulating pathway - multiple species
cjc04330
Notch signaling pathway
cjc04350
TGF-beta signaling pathway
cjc04613
Neutrophil extracellular trap formation
cjc04919
Thyroid hormone signaling pathway
cjc05016
Huntington disease
cjc05031
Amphetamine addiction
cjc05034
Alcoholism
cjc05165
Human papillomavirus infection
cjc05169
Epstein-Barr virus infection
cjc05200
Pathways in cancer
cjc05202
Transcriptional misregulation in cancer
cjc05203
Viral carcinogenesis
cjc05206
MicroRNAs in cancer
cjc05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100402327 (HDAC2)
03083 Polycomb repressive complex
100402327 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100402327 (HDAC2)
04350 TGF-beta signaling pathway
100402327 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100402327 (HDAC2)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100402327 (HDAC2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100402327 (HDAC2)
09149 Aging
04213 Longevity regulating pathway - multiple species
100402327 (HDAC2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100402327 (HDAC2)
05202 Transcriptional misregulation in cancer
100402327 (HDAC2)
05206 MicroRNAs in cancer
100402327 (HDAC2)
05203 Viral carcinogenesis
100402327 (HDAC2)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
100402327 (HDAC2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100402327 (HDAC2)
05165 Human papillomavirus infection
100402327 (HDAC2)
09164 Neurodegenerative disease
05016 Huntington disease
100402327 (HDAC2)
09165 Substance dependence
05031 Amphetamine addiction
100402327 (HDAC2)
05034 Alcoholism
100402327 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100402327 (HDAC2)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100402327 (HDAC2)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100402327 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
100402327 (HDAC2)
BRAF-HDAC complex
100402327 (HDAC2)
REST complex
100402327 (HDAC2)
SHIP complex
100402327 (HDAC2)
MiDAC complex
100402327 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100402327 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100402327 (HDAC2)
Chromatin remodeling factors
NuRD complex
100402327 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100402327
NCBI-ProteinID:
XP_008993185
Ensembl:
ENSCJAG00000004635
LinkDB
All DBs
Position
4:complement(116361889..116393503)
Genome browser
AA seq
585 aa
AA seq
DB search
MRPPPCGLRRWFGGPLPYPVASWCRCHPPLRAFGSSAGRYRSFPAPPPLLPQTCLSPRDC
RPHLSLSAFLSRPSRGGSSSSSSSRRRSRETAVAGEPMAYSQGGGKKKVCYYYDGDIGNY
YYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPD
NMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHA
KKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYG
EYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCG
ADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDC
EIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQ
AIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAK
KARIEEDKKETEDKKADVKEEDKSKDNSGEKTDTKGTKSEQLSNP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccacctccctgcggcctccggaggtggtttggcggccccctcccctacccagtc
gcgagttggtgccgctgccaccccccgctccgagcttttggctcctcagccgggcggtat
cgatctttcccggcgccccctcctctcctccctcagacctgcctttccccgcgggactgc
cgcccccacctttccctcagcgctttcctctcccggccgagtcgcggcggcagcagcagc
agcagcagcagcaggaggaggagccgggagacggcggtggccggggagcccatggcgtac
agtcaaggaggcggcaaaaaaaaagtctgctactactacgacggtgatattggaaattat
tattatggacagggtcatcccatgaagcctcatagaatccgcatgacccataacttgctg
ttaaattatggcttatacagaaaaatggaaatatatagaccccataaagccactgccgaa
gaaatgacaaaatatcacagtgatgagtatatcaaatttctgcggtcaataagaccagat
aacatgtctgagtatagtaagcagatgcagagatttaatgttggagaagattgtcctgtg
tttgatggactctttgagttttgtcagctctcaactggtggttcagttgctggggcggtg
aagttaaatcgacaacagactgatatggctgttaattgggctggaggattacatcatgct
aagaaatcagaagcatcaggattctgttatgttaatgatattgtccttgccatccttgaa
ttactaaagtatcatcagagagtcttatatattgatatagatattcatcatggtgatggt
gttgaagaagctttttatacaacagatcgtgtaatgacggtatcattccataaatatggg
gaatactttcctggcacaggagacttgagggatattggtgctggaaaaggcaaatactat
gccgtcaattttccaatgagagatggtatagatgatgagtcatatgggcagatatttaag
cctattatctcaaaggtgatggagatgtatcaacctagtgctgtggtattacagtgtggt
gcagactcattatctggtgatagactgggttgtttcaatctaacagtcaaaggtcatgct
aaatgtgtagaagttgtaaaaacttttaacttaccgttactgatgcttggaggaggtgga
tacacaatccgtaatgttgctcgatgttggacatatgagactgcagttgcccttgattgt
gagattcccaatgagttgccatataatgattactttgagtattttggaccagacttcaaa
ctgcatattagtccttcaaatatgacaaaccagaacactccagaatatatggaaaagata
aagcagcgtttatttgaaaatttgcgcatgttacctcacgcacctggtgtccagatgcaa
gctatcccagaagatgctgttcatgaagacagtggcgatgaagatggagaagatccagac
aagagaatttctattcgagcatcagacaagcggatagcttgtgatgaagaattctcagat
tctgaggatgaaggagaaggaggtcgaagaaatgtggctgatcataagaaaggagctaaa
aaggctagaattgaagaagataagaaagaaacagaggacaaaaaagcagatgttaaagaa
gaagataaatccaaggacaacagtggtgaaaaaacagataccaaaggaaccaaatcagaa
cagctcagcaacccctga
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