Callithrix jacchus (white-tufted-ear marmoset): 100402398
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Entry
100402398 CDS
T03264
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X2
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100402398 (SORCS1)
Membrane trafficking [BR:
cjc04131
]
Protein recycling
Others
Others
100402398 (SORCS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100402398
NCBI-ProteinID:
XP_035124912
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All DBs
Position
12:complement(96236180..96844489)
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AA seq
1203 aa
AA seq
DB search
MGKVGACGGSPARLSALLAGAGLLVLCAPGVCGGGSCCPSPHPSSAARSASTHRGFSHQG
PPGRAPATPLPLVVRPLFSVAPGDRALSLERARGTGASVAAAVRSSRRRRSGADQEKAEL
GGGASRSPRGVLRDGGQQEPGTREQDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSA
EFGRRWQLIQEGVVPNRFYWSVMGSNKEPDLVHLEARTVDGHSHYLTCRMQNCTEANRNK
PFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNTFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIDNQVKTFITYNKGRDWRLLQAPDTDLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASKDTAPSIIVASGNIGSELSDTDISMFVSSDAGNTWRQIFEEEHSVLYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGKYAGAMESKP
CVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTLIQVDFGDG
IAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFRFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLSFSPNLDDYNPDIPEWRRDIGRVIKKSLVEATGVPGQHI
LVAVLPGLPTTAELFVLPYQDPAGENKRSADDLEQISELLIHKLNQNSVHFELKPGVQVL
VHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINAYAQMQNEKE
QEMISPVSHSESRPSVPQSELRRPGQLIDEKVESQLIEVSNSNFESSGVLGSCSVFSRNP
TEH
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggcgcctgcggcggctcgccagcccggctgagcgcgctcctcgccggc
gcggggctcttggtcctctgcgccccaggcgtctgcggcggcggctcctgctgcccctcg
ccgcaccccagctcggccgcacgctcggcttcgacccataggggtttttctcaccagggg
ccgccaggcagggctcctgccacgcccctgcccctcgtagtgcgccccctgttctcagtg
gcccccggggaccgagcactgtccctggagcgggctcggggcactggggcatccgtggcg
gctgctgtacgctccagccggaggagacggagcggagcggatcaggagaaggcagaactg
ggagggggcgcgagtcggagcccccggggagtgctaagagatggagggcagcaggagcct
gggactcgggagcaggacccggacaaagccacccgcttccggatggaggagctgagactg
accagcaccacatttgcgctgaccggagactcagcacacaaccaagccatggtccactgg
tctggccacaacagcagcgtgattctcattttgacaaagctctatgactataacctgggg
agcatcaccgagagctcgctttggaggtcaaccgattatggaacaacctatgagaagctg
aatgataaagttggtttgaaaaccattttgagctatctctatgtgtgtcctaccaacaag
cgtaagataatgttactcacagacccagagattgagagcagcttattgatcagctcagat
gaaggggcaacttatcaaaaataccggctgaacttctacattcaaagcttgctttttcac
cccaagcaagaagactggattctggcatacagtcaagaccaaaagttatacagctctgct
gaatttgggagaaggtggcagcttatccaagaaggggttgtaccaaacaggttctactgg
tctgtgatggggtcaaacaaagaaccagaccttgtgcatcttgaggccagaactgtggat
ggtcattcacattatctaacttgccgaatgcagaactgtacagaggccaacagaaataaa
ccttttccgggctacattgacccagactctttgattgttcaggatgattatgtgtttgtt
cagctgacatcaggagggcggccacattactacgtgtcctaccgaaggaacacgtttgcc
cagatgaagcttccgaaatatgctttgcccaaggacatgcatgttatcagcactgatgag
aatcaagtgtttgcagcggtccaagaatggaaccagaatgacacgtacaacctctacatc
tcagacacacgtggtgtctacttcaccctggccttggagaatgtccagagcagcagaggc
cctgagggcaatgtcatgatcgacctctatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgacaaccaagtgaagactttcatcacgtataacaaaggcagagac
tggcgtttgctgcaggcaccagacacggatctaaggggggaccccgtgcactgcttgctg
ccctattgctcactacaccttcacctgaaggtctctgagaatccctacacatcagggatc
attgccagcaaagacacagctccaagcattatagtggcatcaggtaatataggttctgaa
ttatcagacactgacatcagcatgtttgtctcttcagatgcagggaacacttggaggcag
atctttgaagaagagcacagtgttttgtacctggatcaaggtggagtcctggttgctatg
aaacacacatctctcccaattcgacatctttggttgagttttgatgaagggagatcttgg
agcaaatacagtttcacatctataccactttttgtggatggggttctgggtgagcctgga
gaagagactctcatcatgacagtgtttggacacttcagccaccgctctgaatggcagctg
gtcaaagtagactacaagtccatttttgatagacggtgtgccgaagaggactacagaccc
tggcagctgcacagccagggggaagcatgtatcatgggagcgaaaaggatatataagaag
cgaaaatcagagaggaaatgtatgcaaggaaaatatgccggagctatggaatctaaaccc
tgtgtctgcacggaggctgattttgactgtgattatggttacgagcgacacagcaatggc
cagtgcctgccagcattttggttcaacccatcctctctgtcgaaggattgtagcttggga
cagagttacctcaacagtactgggtacaggaaggtggtttccaataattgcactgatgga
gtaagggaacagtacactgccaaaccccagaagtgcccaggaaaagccccgcgggggctg
cggatagtcacagctgatggaaagctgacagcggaacaaggacacaacgttactctcatg
gtgcaattagaagagggtgacgttcagcggacacttatccaagtggacttcggcgatggt
atcgcggtgtcttacgtgaatctcagctccatggaagatgggatcaaacacgtctatcag
aacgtgggcattttccgtgtgaccgtgcaggtggacaacagtctgggttctgacagcgcc
gtcctgtacttacatgtaacttgtcccttggagcatgtgcacctgtctcttccctttgtc
accacaaagaacaaagaggtcaacgcgacggcagtgctgtggcccagccaagtgggcacc
ctcacttatgtgtggtggtacgggaacaacacggagcctttgatcaccttggaggggagc
atatccttcagatttacttcagaaggaatgaataccatcacagtgcaggtctcagctggg
aatgccatcctacaagacacaaagaccatcgctgtatacgaggaattccggtcccttcgc
ttgtccttttctccaaacctggatgactacaacccggacatccctgagtggaggagggac
atcggccgagtcatcaaaaagtccctggtggaagccacaggggttccaggccagcacatc
ctggtggcggtgctccccggcttacccacgactgctgaactctttgtcctgccctaccag
gatccagcgggagaaaacaaaaggtcagctgacgacttggagcagatatcagaactgctg
atccacaagctcaaccaaaactcagtacacttcgagctgaagccaggggtccaagtcctg
gtccatgctgctcacttaacagcagcccccctggtggacctcactccaacccacagtgga
tctgccatgctgatgctgctctcagtggtgtttgtggggctagcagtatttgtcatctac
aagtttaaaaggaagatcccgggcattaatgcttatgcccagatgcagaatgagaaagaa
caagagatgatcagtccagtcagtcactctgaaagcaggcccagtgtccctcagagtgaa
ctaaggaggcctggccagcttatagatgagaaggtggaatcccaactcatagaagtttca
aacagcaactttgagagcagtggggtgcttggcagctgttctgtgttttccaggaatcca
actgagcattga
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integrated database retrieval system
