Callithrix jacchus (white-tufted-ear marmoset): 100402545
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Entry
100402545 CDS
T03264
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100402545 (CHD7)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100402545 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
100402545
NCBI-ProteinID:
XP_017820850
Ensembl:
ENSCJAG00000009025
UniProt:
U3EHJ9
LinkDB
All DBs
Position
16:15078531..15258581
Genome browser
AA seq
2994 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQTKLTHFDHYNQYEQQKMHLMDQPSRMISNAPGNGLASPHSQYHTPPVPQVPHGGSGG
GQMGVYPGMQNERHGQSFVDSSSMWGPRAVQVPDQIRAPYQQQQAQPQPPQPAPSGPPAQ
GHPQHMQQMGSYMARGDFSMQQHGQPQQRISQFSQGQEGLNQGNPFIATSGPGHLSHVPQ
QSPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVP
SPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSGQG
LMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGI
PMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSAPRELTGHMRPNGC
PGVGLGDPQAIQERLIPGQQHPGQQPSFQQLPTCSPLQPHPGLHHQSSPPHPHHQPWAQL
HPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSIEQQPQQKKKK
KKNNHIVAEDPSKGFGKDDFPGGVNNQELNRNSLDGSQEEKKKKKRSKAKKDPKEPKEPK
EKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNKGKTE
GSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGR
DSPSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEIEEFYVKYKNFSYLHCQW
ASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDDRGEP
VTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSR
EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFL
VIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAI
ITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLING
AEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLD
ILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQ
SMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITI
ESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRK
QTRLYSAVKEDELMEFSDLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGR
WTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALV
NHSGLSAPVPRGRKGKKVKAQSTQPVVQDADWLASCNPDALFQEDSYKKHLKHHCNKVLL
RVRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPADWWDKEADKSLLIGVFK
HGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPT
RTPFKDEIDEFANSPPEDKEESLEIHVTGKHSESNAELGQLYWPNTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVST
FGVIFDPVKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPTKPDDEPPDLS
MIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLL
VGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNISSLNPLAVGFGQTPPAISSAH
IQDEKVMEQAEGKVEESENPTPKEKCEGKEEEEETDSGGKESKQEREAEASSVKNELKGV
EVGADTGSKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARD
ETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPTTVDSPLQKRSFAELSMVGQASISGTEDITTSPQLSKEDALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSL
SSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEG
LDMLFLSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVISLEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPTYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFD
RLLTGPVVRGEGASRRGRRPKSEIARAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQN
LQSLQLAGLMGFPPGLATAATAGGDAKNPAAVLPLMLPGMAGLPNMFGLGGLLNNPLSAA
TGNTTTASSQGEPEDSTSKGEEKGNENEDENKDSEKSTDAVSAADSANGSVGAATAPAGL
PSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSSEEKAADKAE
GRPFKDGETLEGSDAEESLDKTAESSLLEDEIAQGEELDSLDGGDEIENNENDE
NT seq
8985 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctttttggcgaggatgggaatattttcagtgaaggc
cttgaaggtcttggagaatgtggttacccggaaaatccagtaaatcctatgggtcagcaa
atgccgatagaccaaggctttgcctctttacagccatcccttcatcatccttccactaat
caaaatcaaacaaagctgacacattttgatcactataatcagtacgaacaacaaaagatg
catctgatggatcagccgagcagaatgataagcaacgcccccgggaacggactcgcgtct
ccgcactcgcagtatcacacccctcccgttcctcaggtgccccatggtggcagtggtggc
ggtcagatgggcgtctaccctggcatgcagaatgagaggcatgggcaatcctttgtggac
agcagctccatgtgggggccccgggctgttcaggtaccagaccagatacgagccccctac
cagcagcagcaggcacagccgcagccaccacagccggctccatcggggccccctgcacag
ggccaccctcagcacatgcagcagatgggcagctatatggcacgtggggatttttccatg
cagcagcatggtcagccccagcagaggataagccagttttcccaaggccaggagggcctc
aatcagggaaatccttttattgccacctcaggacctggccacttgtcccacgtgccccag
cagagtcccagcatggcaccttccttgcgtcactcggtgcaacagttccatcaccacccc
cctactgctctccatggagaatccgttgcccacagtcccagattctccccgaatcctcct
caacaaggggctgttaggccacaaacccttaactttagttctcggagccagacagtcccc
tctcctactataaacaactcagggcagtattctcgatatccttacagtaacctaaatcag
ggattagttaacaatacagggatgaatcaaaatttaggccttacaaataatactccaatg
aatcagtccgtaccaagataccccaatgctgtaggattcccatcaaacagtggtcaagga
ctaatgcaccagcagcccatccaccccagtggctcacttaaccaaatgaacacacaaact
atgcatccttcacagcctcagggaacttatgcctctccacctcccatgtcacccatgaaa
gcaatgagtaatccagcaggtactcctcctccacaagtcaggccgggaagtgctgggata
ccaatggaagttggcagttatccaaatatgccccatcctcagccatctcaccagccccct
ggtgccatgggaatcggacagaggaatatgggccccagaaacatgcagcagtctcgtcca
tttatgggcatgtcctcggcaccaagggagttgactgggcacatgagaccaaatggttgt
cctggtgttggccttggagacccacaagcaatccaggaacgactgatacctggccaacag
caccctggtcagcagccgtctttccagcagttgccaacctgttctccgctgcagccccac
ccgggcttgcaccaccagtcttcacccccacaccctcatcaccagccttgggcacagctc
cacccatcaccccagaacaccccgcagaaagtgcctgtgcatcagcattcgccatcggag
ccctttctagagaaaccagtgccggatatgactcaggttagtggaccgaatgctcagcta
gtgaagagtgatgattacctgccgtcaatagaacagcagccacaacaaaagaagaagaaa
aagaaaaacaaccacattgtagcagaggatcccagtaaaggttttggtaaagatgacttc
cctggtggggtaaataaccaagaactaaataggaactcactggatgggtcccaagaagaa
aaaaagaaaaagaaaaggtcaaaggcaaaaaaagatccgaaggaaccgaaagaacccaag
gagaaaaaagagcccaaggaacccaagaccccgaaagcccctaagattcccaaagagcca
aaggaaaagaaagcaaaaactgccacgccaaaacctaaatccagcaaaaagtcaagtaat
aagaaacctgactcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaacagaa
ggttctgaaaattcagacttagacaaaacacccccaccatctcctcctcctgaagaagac
gaggacccaggtgttcagaagagacggtccagcagacaggtgaagagaaagcgctacact
gaagacctggagttcaagatttccgacgaggaggcagatgatgcagatgctgctgggagg
gattccccctccaacacctcacagtcagaacagcaggaatctgttgatgcagaaggccca
gtggtagaaaaaatcatgagcagtcgttcagtaaaaaagcagaaggaatctggagaagag
gtagaaattgaggaattctatgtgaaatacaaaaacttctcttatcttcattgtcaatgg
gcatctgtagaagatctggaaaaagataagagaattcagcaaaaaattaaacgatttaag
gcaaagcagggccagaacaagttcctttcagagattgaggatgagctttttaatccagat
tatgtggaggttgaccggataatggactttgcacgtagcacagatgaccggggagagcct
gtgactcactatttggtgaagtggtgttcacttccttatgaagacagcacgtgggagcgg
aggcaggacatagatcaagcaaagattgaggagtttgagaaattaatgtccagggagccg
gaaacagagcgtgtggagcgacctcctgctgatgactggaagaaatcggagagttccagg
gagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggctgctt
ttcaattggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaact
atccagtccattacatttctctatgagatatatttgaaaggaatccatggccctttttta
gtaattgccccattgtccacaatccccaactgggaaagggaattccgaacctggacagag
ttgaatgtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaa
atgtacttcaaagatccccagggtcgagtgataaaggggtcctataagtttcatgccatc
atcactacatttgagatgattttgactgattgtcctgagctgcggaatattccatggcgc
tgtgtagtcattgatgaagcccacaggctgaagaacaggaactgcaagctgttggaggga
ctcaagatgatggacttggaacacaaagtgctgctgacgggaaccccgctacagaacact
gtggaagaactcttcagcttgcttcatttcttggaaccaagtcgcttcccttcagaaacc
acctttatgcaagaatttggtgatctaaaaacagaagagcaggtgcaaaaactacaagct
attctaaagccaatgatgttgagacgtctcaaagaggatgtagaaaagaacttggccccc
aaagaagaaactattattgaagtcgagctaacaaacattcagaagaaatattaccgagcc
atccttgagaagaattttacatttctttccaaaggtggtgggcaagctaatgtacctaac
cttttaaacactatgatggaattgcggaagtgctgcaatcatccataccttatcaatggt
gctgaagagaaaattttggaagagtttaaagaaacacacaatgcagagtctccagatttt
cagctccaggcaatgatccaggctgctggcaagctagtgctgattgacaagctgctgcca
aaactgaaggctggtggccacagggtgctcatcttttcccagatggtgcgctgcttggac
atactggaagactacctcattcaaagacggtacccatatgaaaggatcgatggccgagtc
agaggcaacctccgccaggcagctatcgacagattctccaaacctgattctgataggttt
gttttcctcctgtgtacaagggcaggaggcttaggcattaaccttactgctgctgatacc
tgcatcatctttgattcagactggaatccccaaaatgacctccaggctcaggctagatgt
catagaataggacaaagcaaatctgtgaaaatctacaggctgattacaagaaattcctat
gaaagggaaatgttcgacaaggctagtttgaagctggggctggataaagctgtgctgcag
tctatgagtggaagagaaaatgctaccaatggggtacaacagctttccaagaaagaaata
gaggatcttctacgaaaaggggcctatggggcactcatggatgaggaggatgaagggtct
aaattttgtgaagaagatattgatcagatcctgctacgtcgaacccacaccattaccatt
gagtcagaagggaaaggttccacatttgctaaggccagttttgttgcatctggaaatagg
acagatatttccttagatgatccaaatttctggcaaaagtgggctaagaaggctgaattg
gatattgatgccttaaatggaaggaacaacctggttattgatactccaagagtgagaaag
cagaccaggctctacagtgcagtgaaggaagatgagctaatggagttctcagacttggaa
agtgattctgaagaaaagccctgtgcaaagccacggcgcccccaggataagtcacagggc
tatgcaaggagtgagtgtttcagggtggagaagaatctgcttgtctatggttggggacgg
tggacagacattctctcccatggacgctataaacgtcaactcactgagcaagatgtggaa
accatttgcagaaccattctggtgtactgtcttaatcattacaaaggggatgagaatatc
aaaagcttcatctgggatctgatcacacctacagcagatggccagactagagccttggtc
aaccattctggtttatcagccccagtgccaaggggaaggaagggaaagaaggtgaaagcc
cagagcacacagccggtggtgcaggatgccgactggctggccagctgcaacccggatgcc
ctgttccaggaggacagctacaagaaacacctgaagcatcactgtaacaaggtcctgctg
cgtgtccgcatgctgtactacctaagacaagaagtgataggagaccaggcagataagatc
ttagagggtgctgactcaagtgaagccgatgtatggattcctgaacctttccatgctgaa
gttcctgcagattggtgggataaggaagcagacaaatccctcttaattggagtattcaaa
catggctatgagaagtacaactccatgcgagctgaccccgcgctgtgctttctggaacga
gtcggtatgcctgatgccaaggccatagctgccgagcaaagaggaacagacatgctagca
gatggcggtgacgggggagaatttgatagagaagatgaagacccagaatataaaccaacc
agaacaccattcaaagatgaaatagatgaatttgcaaattctcctccagaggataaggaa
gaatccttggaaatacatgtcacaggcaagcacagtgagagtaatgctgagttaggccaa
ctttactggcctaacacttcaaccctgactacacgtctgcgccggctcattactgcctat
cagcgcagctataaaaggcaacagatgaggcaagaggccctaatgaagactgaccggcgc
agacggcggcctcgggaggaagtgagagctctggaagcggaaagggaagctattatatct
gagaagcggcaaaagtggacaagaagagaagaggctgatttttaccgtgtagtatccacc
tttggggttatttttgaccccgtgaaacagcaatttgactggaaccaatttcgagccttt
gccaggcttgacaaaaagtctgatgaaagtttggagaaatacttcagttgttttgtggcc
atgtgtaggcgagtatgtcgaatgcccaccaagccagatgatgaaccgcctgacctctcc
atgattgagcccatcacagaggagcgagcctctcgaactctgtaccgcattgagctgctg
cggaagatccgcgagcaagttctccatcacccccagctgggagagaggcttaagctctgc
cagccgagcttggatctgccagagtggtgggagtgtggaaggcatgaccgagacttgctg
gttggtgccgctaaacatggggtcagtcggacggattaccacatcctcaatgacccggag
ttgtccttcttggatgcacataaaaactttgctcaaaacagaggggcaggtaatatatct
tccttgaacccactggcggttggatttggccagactcctccagccatctcatcggctcac
attcaagatgagaaggtaatggaacaagctgaaggcaaagtggaggagtctgaaaacccg
actcccaaggagaaatgtgagggcaaagaagaggaagaagaaaccgacagcggtggaaag
gagagcaagcaggagcgtgaggccgaggccagctctgtgaaaaatgaactgaaaggtgtc
gaggtcggcgcagacactgggtccaagtctatctcagagaaaggttcagaagaggatgaa
gaggaaaaactggaggatgacgataagtcagaagagtcttcccagcctgaagcaggagct
gtctctagagggaagaattttgatgaagaaagcaatgcttccatgagcactgctagggat
gaaacccgagatggattctacatggaggacggagatccttcagtagcgcagctcctgcat
gaaagaacatttgccttctcattttggcctaaggatagagtaatgataaaccgattagac
aacatctgtgaagcagtgttgaaaggcaaatggccagtaaataggcgccagatgtttgat
ttccaaggcctcatcccaggttacacacccaccacagtggacagccccttgcagaagagg
agctttgccgagctctccatggtcggtcaagccagcattagtgggactgaggacatcact
acttctcctcagttgtcaaaggaagatgccctcaacctctctgtcccccgccagcgaagg
aggaggaggagaaaaattgaaattgaggccgaaagagctgccaagaggcgaaatctcatg
gagatggttgcccagcttcgagagtctcaggtggtctcagaaaatggacaagaaaaagtt
gtagatttatcaaaggcctcaagagaggcaacaagctctacctcaaatttttcatctctt
tcttcaaagtttatcttgcctaatgtctcgacaccagtgtctgatgcctttaagactcaa
atggaactgctccaagcaggcctttcacgcacacccacaaggcatctgcttaatggctcc
ctagtggatggagagcctcccatgaagaggaggcggggaaggaggaaaaacgtggagggc
cttgatatgcttttcctgagccacaaacggacgtcattgagtgcagaggatgctgaggtg
accaaagcttttgaagaagatatagagaccccaccaacaagaaacattccttctcccgga
cagctggacccagacacgcggatccctgttatcagtctcgaagatgggactaggctggtg
ggggaagatgctcctaaaaataaggatttagttgaatggctgaagctgcaccctacatac
actgttgatatgccaacttatgtaccaaagaatgcagatgtgctattttcctcatttcag
aaaccgaaacagaaacgacatagatgtcgaaaccctaataaattggatataaacactttg
acaggagaggaaagggtgcctgttgtcaataagcggaatgggaagaagatgggtggagct
atggcgcctccaatgaaggatctacccaggtggctggaagaaaatcccgaatttgcagtt
gctccagactggactgatatagttaagcagtctggttttgttcccgagtcgatgtttgac
cgccttctcactgggcctgtggtgcggggagaaggagcaagcagaagaggaagaaggccc
aaaagtgagatcgccagggcagctgcggccgctgtggcctccacgtcagggatcaaccct
ctgctggtgaacagcctgtttgctggaatggacctgacgagccttcagaatctccagaat
ctccagtcgctccagctggcaggcctcatgggcttccctccaggactggcaacagctgcc
accgccggaggcgacgcgaagaaccctgctgctgtgctgcccctgatgctgccaggaatg
gcgggcctgcccaacatgtttggcttgggcgggctgttgaataaccctctgtcagctgct
actggaaacaccactactgcttctagtcaaggagaaccggaagacagcacttcaaaagga
gaggagaaaggaaatgagaatgaagacgagaacaaagactctgagaaaagcacagatgct
gtttcggctgctgactctgcaaatggatctgttggtgctgctactgccccggccggattg
ccctcaaacccgctagccttcaaccctttcctcctgtctaccatggccccgggcctcttc
tacccatccatgtttctacctccaggactggggggattgacgctgcctgggttcccagca
ttggcaggacttcagaatgccgtgggctccagcgaagaaaaggctgctgacaaggccgag
ggaagaccctttaaagatggggagacccttgaaggcagcgatgccgaggagagcctggat
aagactgcagagtcctccctcttagaagacgaaatagcacagggtgaagagctagactcg
cttgacgggggggacgaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
