Callithrix jacchus (white-tufted-ear marmoset): 100402564
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Entry
100402564 CDS
T03264
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04330
Notch signaling pathway
cjc05017
Spinocerebellar ataxia
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100402564 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100402564 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
100402564 (ATXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Pdase_C33_assoc
Motif
Other DBs
NCBI-GeneID:
100402564
NCBI-ProteinID:
XP_054110762
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All DBs
Position
4:12900379..12929555
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AA seq
797 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRSSEEKAPALPSDNHRVEGAAWLPGNPGGRGHGGGRH
GPAGTSAELGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLPAAYATPQPGTPVSPVQY
AHLPHTFQFIGSSQYSGTYASFIPSQLIPPTANPVTSAVASAAGATTPSQRSQLEAYSTL
LANMGSLSQAPGHKAEQQPQQPPPPQQHLSRAPGLITPGSPPPAQQSQYVHISSSPQSTG
RTASPPAIPVHLHPHQTMIPHTLTLGPPSQVVMQYADSGSHFVPREATKKAESSRLQQAI
QAKEVLNGEMEKGRRYGAPSSADLGLGKVGGKSVPHPYESRHVVVHPSPSDYSSRDPSGV
RASVMVLPNSSTPAADLEVQQATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTH
SASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGSTD
MEASGAAPAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQ
SVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERI
EDSHSPGMAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSV
GDVCISLTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGIHQGSAQML
SENGELKFPEKMGLPAAPFLTKIEPSKPPATRKRRWSAPESRKLEKSEDEPPLTLPKPSL
IPQEVKICIEGRSNVGK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaacgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggtccagcgaggagaaggcccccgccctgcccagcgacaaccaccgggtg
gagggcgcagcatggctgccgggcaaccctggtggccggggccacgggggcgggaggcac
gggccggcagggacctcagcggagcttggtttacaacagggaataggtttacacaaagca
ttgtccacagggctggactactccccacccagcgcgcccaggtctgtccccgtggccacc
acgctgcccgccgcgtacgccaccccacagccagggaccccggtgtctcccgtgcagtac
gctcacctgccacacaccttccagttcattgggtcctcccagtacagcgggacctacgcc
agcttcatcccgtcacagctgatccccccaaccgccaaccccgtcaccagtgcggtggcc
tcggctgcaggggccaccactccatcccagcgctcccagctggaggcctattccactctg
ttggccaacatgggcagtctgagccaggcgccgggacacaaggctgagcagcagccgcag
cagccgccaccgccgcagcagcacctcagcagggctccggggctcatcaccccggggtcc
cccccacccgcccagcagagccagtacgtccacatttccagttctccgcagagcaccggc
cgcaccgcctctcctccagccatccccgtccacctccacccccatcagacgatgatccca
cacacactcaccctgggccccccctcccaggtcgtcatgcaatacgccgactccggcagc
cactttgtccctcgggaggccaccaagaaagccgagagcagccggctgcagcaggccatc
caggccaaggaggtcctgaatggtgagatggagaagggccggcggtacggggccccgtcc
tcagccgacctgggcctgggcaaggtgggtggcaagtcggtccctcacccgtacgagtcc
aggcacgtggtggtccacccgagcccctccgactacagcagtcgcgacccctcgggggtc
cgggcctctgtcatggtcctgcccaacagcagcacgcccgcggccgacctggaggtgcag
caggccactcatcgcgaggcctccccctccaccctcaacgacaaaagcggcctgcactta
gggaagccgggccaccggtcctatgcgctctcaccccacacggtcattcagaccacacac
agtgcttcagagccactcccggtgggactgccagccacagccttctacgcggggactcaa
ccccctgtcatcggctacctgagcggccagcagcaagcgatcacctacgccggcagcctg
ccccagcacctggtgatccccggcacacaacccctgctcatcccggtcggcagcactgac
atggaagcgtcgggggcagctccggccatcgtcacgtcgtccccccagtttgctgcagtg
cctcacacgtttgtcaccaccgcccttcccaagagcgagaacttcaacccggaggccctg
gtcacccaggccgcctacccggccatggtgcaggcccagatccacctgcccgtggtgcag
tctgtggcctcccccgcagcggctccccccacgctgcctccctacttcatgaaaggctcc
attatccagttggccaacggggagctgaagaaggtggaagacttaaaaacggaagatttc
atccagagtgcagagataagtaacgacctgaagatcgactccagcacggtggagaggatc
gaagacagccatagtccgggcatggccgtgatacagttcgccgtcggggagcaccgagcc
caggtcagcgttgaagttttggtagagtatcctttttttgtgtttggacagggctggtct
tcctgctgtccggagagaaccagccagctctttgatttgccgtgttccaaactctcagtt
ggggatgtctgcatctcgctgaccctcaagaacctgaagaacggctctgttaaaaagggc
cagcccgtggatcccgccagcgtcctgctgaagcactcaaaggccgacggcctggcgggc
agcagacacaggtatgccgagcaggaaaacggaatccaccaggggagtgcccagatgctg
tctgagaatggcgaactgaagtttccagagaaaatgggattgcccgcagcacccttcctc
accaaaatagaacccagcaagcctccggccacgaggaagaggaggtggtcggcgccggag
agccgcaaactggagaagtcagaagatgaaccacctttgactcttcctaagccttctcta
attcctcaggaggttaagatttgcattgaaggccggtctaatgtaggcaagtag
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