Callithrix jacchus (white-tufted-ear marmoset): 100402656
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Entry
100402656 CDS
T03264
Symbol
PCDHB3
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100402656 (PCDHB3)
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Protocadherins
100402656 (PCDHB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100402656
NCBI-ProteinID:
XP_002744303
UniProt:
A0A2R8MJZ2
LinkDB
All DBs
Position
2:37534588..37540570
Genome browser
AA seq
796 aa
AA seq
DB search
MEAGGERFLRQRQVLLLFVLLGGSLAGSASRRYSVAEEKEKGFLIANLAKDLELRVEELA
ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREEICGPTEPCILHFQILLQNPLQFVTNE
LHIIDINDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTIFPNSHFHV
LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGAPPRSGTAQINIQVLDINDNAP
EFALPLYEVTVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD
MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVVVQVVDVNDNPPELTLSSVNSPVPENS
AETVLAVFSVSDLDSGDNGRVRCSIENNLPFVLKPSVENFYTLVSEGALDRETRSEYNVT
ITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
GTNAQVTYSLLPPQDPHLALASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFGVWAHNGEMRTARLLSERDAAKHRLLVLVKDNGEPPRSATATLHV
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
SVGGCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLSGGSGTNEFKFLKPIIPNFLAQGAE
RVSEANPSFRNSFEFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggaggagagcgatttcttagacaaaggcaagtcctgcttctctttgttctt
ctgggtgggtctctggctgggtccgcgtcaagacgctattcggtggctgaggaaaaagag
aagggctttttaatagccaacctagcaaaggatctggagctcagggtagaggaactggca
gcgaggggggcccaagttgtatccaaaggcaacaaacagcattttcagctcagtcatcag
acaggtgatttgctactgaatgagaaattggacagggaggagatatgcggccccacagaa
ccatgcatactgcattttcagatattactgcaaaaccctttgcagtttgttacaaacgag
ctccacatcatagatataaatgaccattctccggtattctttgaaaatgaaatgcatctg
aaaatcctagaaagcactctaccaggaacagtaattcctttgggaaatgctgaggacttg
gatgtgggaagaaacagcctccaaaactacactatctttccgaattctcacttccacgta
ctcactcgcagtcgtagggacggaaggaagtacccagaactagtactggacaaagcgctg
gatcgggaggagcagccggaactcagcttaacgctcactgcgctggacggcggcgctccg
cctcggtctgggacagcccagatcaacatccaggtcttagacataaacgacaatgcacca
gaatttgcactgcctctctatgaggttacagttctagagaatacccccgttaactctgtc
attgtcactgtctcggcttctgacttagatacgggaagttttgggacaatatcgtacgca
ttttttcatgcttctgaagaaattcgcaaaacttttcaactaaatccaattactggtgat
atgcaactagtcaaatatttgaattttgaagcgattaatagttatgaagtcgacattgag
gcgaaggatggcggaggcctatctggaaagtctacagttgtagtccaggtggttgatgtc
aatgacaacccaccagaactgaccttgtcgtcagtaaacagccctgtccccgagaactcg
gcagagactgtactggctgttttcagtgtttctgacctagactctggagacaacggaaga
gtgaggtgttccattgagaacaatctccccttcgtcctgaaaccatctgtagagaacttt
tacaccctagtgtcagaaggagcgttggacagagagaccagatccgagtacaacgtcacc
atcaccgtcacagacttgggaacacccaggctgaaaaccgagtacaacataaccgtgctg
gtctccgacgtcaatgacaacgcccctgccttcacacaaacctcctacaccctgttcgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtcagcgccacagacagagactca
ggcaccaacgcacaggtcacctactcgctgctgccgccccaggacccgcacctggccctc
gcctccctggtctccatcaacgcggacaacggacacctgttcgccctccggtcgctggac
tacgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgcggctccccggcg
ctgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggcggcc
gagccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aatggcgagatgcgcaccgccaggctgctgagcgagcgcgacgcggccaagcacaggctg
ctggtgctggtcaaggacaatggcgagcctccgcgctcggccaccgctacgctgcacgtg
ctcctggtggacggcttctcccagccctacctgccgctcccggaggcggccccggcccag
gcccaggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcgctc
ttcctgttctcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcggcc
tcggtgggtggctgctcggtgcccgagggcccgtttccagggcatctggtggacgtgagc
ggcaccgggaccctgtcccagagctaccagtacgaggtgtgtctgtcgggaggttctggg
acaaatgagttcaagttcctgaagccgattatccccaacttccttgctcagggtgcagag
agggttagcgaggcaaaccccagtttcaggaacagctttgaattcagttaa
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