Callithrix jacchus (white-tufted-ear marmoset): 100402662
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Entry
100402662 CDS
T03264
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04820
Cytoskeleton in muscle cells
cjc05410
Hypertrophic cardiomyopathy
cjc05412
Arrhythmogenic right ventricular cardiomyopathy
cjc05414
Dilated cardiomyopathy
cjc05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100402662 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100402662 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100402662 (SNTB1)
05414 Dilated cardiomyopathy
100402662 (SNTB1)
05416 Viral myocarditis
100402662 (SNTB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
S-AdoMet_lyase
Motif
Other DBs
NCBI-GeneID:
100402662
NCBI-ProteinID:
XP_017821108
Ensembl:
ENSCJAG00000005315
UniProt:
U3BJ13
F7H1Y4
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All DBs
Position
16:74755778..75040754
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AA seq
540 aa
AA seq
DB search
MAVAAAAAAAAAGPAGGGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSSEEGAAAYN
GIGTATNGSFCRGAGAGHPGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQ
ELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQ
ALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGSTSDPPSSQSFSFH
RDRKSIPLKMCYVTRSMALADPESRQLEIHSPDAKHMVILRSKDSATAQAWFSAIHSNVN
DLLTRVIAEVREQLGKTGIAGSREIRHLGWLAEKVPGESEKQWKPALVVLTEKDLLIYDS
MPRRKEAWFSPVHTYPLLATRLVHSGPGKGSPQAGVDLSFATRTGTRQGIETHLFRAETS
RDLSHWTRSIVQGCHNSAELIAEISMACTYKNQECRLTVHYENGFSITTEPQEGAFPKTI
LQSPYEKLKMSSDDGIRMLYLDFGGKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcggcggcagctgctgggccggccggcgggggaggcggc
cgggcgcagcggagcgggctgctggaagttttggtgcgggatcgctggcacaaagttcta
gtgaacttaagcgaggacgccctggttctgagcagcgaggagggcgctgcggcgtacaac
ggcatcgggaccgccaccaatggctcgttctgcaggggcgccggggctgggcacccgggc
gcgggcggcgcgcaacccccggactcgcccgccggggtccgcaccgccttcaccgacctg
cccgagcaggtgccggagtccatctcgaaccagaagcgcggtgtgaaggtgctgaagcag
gaactgggcgggctggggatcagcatcaaggggggcaaggagaacaagatgcccatcctc
atcagcaagatcttcaaggggctagcggcggaccagacccaagccctgtacgtgggcgac
gccatcctgtcggtgaacggagccgacctgcgggacgccacccatgacgaggcggtgcag
gcgctgaagcgcgcgggcaaggaagtgctgctggaagtgaagtacatgcgagaagccacg
ccctatgtgaagaaaggatccccagtatctgagattgggtgggaaacgcctccacctgaa
tcccctcggttagggggcagcacctcagaccctccgtcatcgcagtccttctccttccac
agagaccggaaaagcatccctctcaaaatgtgttacgtcactcggagtatggccttggcc
gaccctgagagcaggcagcttgaaatccactctccagatgctaagcacatggtgatccta
aggagcaaggactcagccaccgctcaggcatggttcagtgccatccattccaacgttaat
gacctgctgacccgagtgattgctgaggtcagagagcagctggggaaaacaggcattgct
gggagccgagagataaggcatcttggctggcttgcagaaaaggtgccaggggagagtgag
aaacagtggaaaccagccctggttgtgctgactgagaaagaccttttaatctatgacagc
atgccacggaggaaggaagcctggttcagcccggttcacacataccctcttcttgccacc
aggctggtccattcaggtccagggaagggatcaccccaggctggtgtggatctgtccttt
gcaacgcgaactggtaccaggcaagggattgaaacacatctcttcagagcggagaccagc
agggacctctcccactggacaaggagcatagtacaaggttgccacaattctgctgaactc
atcgcagaaatcagcatggcttgcacctacaaaaaccaggagtgccgtttgaccgtacat
tatgagaatggattttctattaccactgaaccacaggagggtgcctttcccaagacaatc
ttacagtctccttacgaaaagctcaaaatgtcttcagatgatggaatcaggatgctgtac
ttagattttggaggcaaagatggagagattcaactggaccttcattcctgccccaagcca
attgttttcatcattcattccttcctgtcagctaagattacaagactgggcttggtggcc
tga
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