Callithrix jacchus (white-tufted-ear marmoset): 100402675
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Entry
100402675 CDS
T03264
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X16
KO
K06757
neurofascin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04514
Cell adhesion molecule (CAM) interaction
cjc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100402675 (NFASC)
04517 IgSF CAM signaling
100402675 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100402675 (NFASC)
Cell adhesion molecules [BR:
cjc04515
]
Immunoglobulin superfamily
L1 family
100402675 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_PDGFR_d4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
100402675
NCBI-ProteinID:
XP_002760746
Ensembl:
ENSCJAG00000017046
LinkDB
All DBs
Position
19:28265173..28471663
Genome browser
AA seq
1342 aa
AA seq
DB search
MRRLAARGAAGDAGEVAAPAAGGSDSAQARSPSPWRLIDLGAIWNTGVFLPAAAWNGASS
GVERRRLNEAKKLSSVQKVQLKRLKVTRPRGLGNREWGRVPRMARQPAPPWVHAAFLLCL
LSLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN
SRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSK
SPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPIAQDKRVSQGHNGDLY
FSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMV
LRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLA
SNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQ
SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQ
LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGI
YTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWL
KDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTN
RLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDH
SKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG
TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYE
IRVQAENDFGKGPEPESVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGIMLGY
TLKYVAFNGTKVGKQIVENFSPNQTKFVVQRTDPVSRYRFTLSARTQVGSGEAVTEESPA
PPNEATPTAAPPTLPPTTVGATGAVSSTDATAIAATTEATTVPIVPTVAPTTIATTTVAT
TTTTTAATTTTTTESPPTTTSGTKIHESAPDEQSIWNVTVLPNSKWANITWKHNFGPGTD
FVVEYIDSNHTKKTVPVKAQTQPIQLTDLYPGMTYTLRVYSRDNEGISSTVITFMTSTAY
TNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEED
GSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDK
DETEGNESSEATSPVNAIYSLA
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggctgcgagaggcgctgcaggggacgcgggggaagtggcggcgccggca
gcgggcggctcggacagcgcccaggcccgtagcccgagcccttggaggttgattgactta
ggtgcaatttggaacactggagttttccttcctgctgcagcctggaacggagcctcctct
ggtgttgaaaggaggaggctgaatgaggcaaagaagctgagctctgtccagaaggtccag
ttaaagcggctcaaggtgacaagaccccgagggctggggaacagggagtggggccgggtg
ccaaggatggccaggcagccggcaccgccctgggtccacgcagccttcctcctctgcctc
ctcagtcttggcggagccatcgaaattcctatggatccaagcattcagaatgagctgacg
cagccaccgaccatcaccaagcagtcagtgaaggatcacatcgtggacccccgtgataac
atcctgattgagtgtgaagcaaaggggaaccctgcccccagcttccactggacacgaaac
agcagattcttcaacatcgccaaggaccccagggtgtccatgaggaggagatctgggacc
ctggtgattgacttccgcagtggtggccggccggaggaatatgagggggaataccagtgc
ttcgcccgcaacaaatttggcacggccctgtccaataggatccgcctgcaggtgtctaaa
tctcctctgtggcccaaggaaaacctcgaccctgtcgtggtccaagagggcgctcctttg
acactccagtgcaaccccccgcctggacttccatccccagtcatcttctggatgagcagc
tccatggagcccatcgcccaagacaaacgtgtctctcagggccataatggagacctctac
ttctccaacgtgatgctgcaggacatgcagaccgactacagttgcaatgcccgcttccac
ttcacccacaccatccagcagaagaaccccttcaccctcaaggtcctcaccacccgagga
gttgcagaaagaacacccagcttcatgtatcctcagggcaccgcgagcagccagatggtg
cttcgtggcatggacctcctgctggaatgcatcgcctccggggtcccaacaccagacatc
gcatggtacaagaaaggtggggacctcccatcggacaaggccaagtttgagaactttaat
aaggccctgcgtatcaccaatgtctccgaggaagactccggggagtatttctgcctggcc
tccaacaagatgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctac
tggctggacgaacccaagaaccttatcctggctcctggcgaggatgggagactggtgtgt
cgagccaatggaaaccccaaacccactgtccagtggatggtgaatggggaacctttgcaa
tcggcaccacccaacccaaatcgtgaggtggccggagacaccatcatttttcgggacacc
cagatcagcagcagggccgtgtaccagtgcaacacctccaacgagcatggctacctgctt
gccaatgccttcgtcagcgtactggatgtgccgcctcggatgctgtcaccccgaaaccag
ctcattcgagtgattctttacaaccggacacggctggactgccctttctttggatctccc
atccccacactgcgatggtttaagaatgggcaaggaagcaacctggatggtggcaactac
catgtttatgagaatggcagtctggagattaagatgatccgcaaagaggaccagggcatc
tacacctgtgtcgccaccaacatcctgggcaaagctgaaaaccaagtccgcctggaggtc
aaagaccccaccaggatctaccggatgcctgaggaccaggtggccaaaaggggcaccacg
gtgcagctggagtgtcgagtgaagcacgacccctccctgaaactcactgtctcctggctg
aaggatgacgagccactctatattggaaacaggatgaagaaggaagatgactccctgacc
atctttggtgtggcagagcgggaccagggcagttacacgtgtgttgccagcactgagcta
gaccaagacctggccaaggcctacctcaccgtgctagctgatcaggccactccaactaac
cgtttggctgccctgcccaaaggacggccagaccggccccgggacctggagctcactgat
ttggctgagaggagcgtgcggctgacctggatccccggggacgataacaacagccccatc
acagactatgtcgtccagtttgaagaagaccagttccaacccggggtctggcatgaccat
tccaagtaccccggcagtgttaactcagccgtcctccggctgtccccatatgtcaactac
cagttccgcgtcattgccatcaatgaggttgggagcagccaccccagcctcccgtccgag
cgctaccgaaccagtggagcgcctcctgaatccaatcctggtgacgtgaagggagagggg
accagaaagaacaacatggagatcacgtggacgcccatgaatgccacctcggcctttggc
cccaacctgcgctacattgtcaagtggaggcggagagagactcgagaagcctggaacaac
gtcacagtgtggggctctcgctacgtggtggggcagaccccagtctacgtgccctacgaa
atccgagtccaggctgaaaatgacttcgggaagggccctgagccagaatccgtcatcggc
tactccggagaagatttacccagtgcccccaggcgtttccgagtccggcagcccaacctg
gagacaatcaacctggaatgggatcatccagagcatccaaatgggatcatgcttggatac
actctcaaatacgtggcctttaacgggaccaaagtgggaaagcagatagtggaaaacttc
tctcccaatcagaccaagttcgtggtgcaaagaacagaccccgtgtcacgctaccgcttt
accctcagcgccaggacgcaggtgggctctggggaagccgtcacggaggagtcaccagca
cccccgaatgaagctactccaaccgcagctcctcccacattgcccccgactaccgtgggt
gcgacgggcgctgtgagcagtaccgatgctactgccattgctgccaccaccgaagccaca
acagtccccatcgtcccaactgtcgcacctaccaccatcgccaccaccaccgtcgccaca
actactacaaccactgccgccaccaccaccaccaccacggagagtcctcccaccaccacc
tctgggactaagatacacgaatccgcccccgatgagcagtccatatggaacgtcacggtg
ctccccaacagtaaatgggccaacatcacctggaagcacaatttcgggcccggaactgac
tttgtggttgagtacatcgacagcaaccatacgaaaaaaactgtccccgttaaggcccag
actcagcctatacagctgacagacctctatcccgggatgacatacacgttgcgggtttat
tcccgggacaacgagggcatcagcagtaccgtcatcacctttatgaccagtacagcttac
accaacaaccaagcggacatcgccacccagggctggttcattgggctcatgtgtgccatc
gccctcctggtgctgatcctgctcatcgtctgtttcatcaagaggagtcgtggcggcaag
tacccagtacgagaaaagaaggatgttccccttggccctgaagatcccaaggaagaggat
ggctcgtttgactatagtgatgaggacaacaagcccctccagggcagccagacatctctg
gacggcaccatcaagcagcaggagagtgacgacagcctggtggactatggcgagggtggc
gagggccagttcaatgaagacggctccttcatcggccagtacacggtcaaaaaggacaag
gacgaaacagagggcaatgaaagctcagaggccacgtcacccgtcaatgccatctactct
ctggcctaa
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integrated database retrieval system
