Callithrix jacchus (white-tufted-ear marmoset): 100402818
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Entry
100402818 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100402818
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100402818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100402818
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100402818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
XH
DUF4164
Motif
Other DBs
NCBI-GeneID:
100402818
NCBI-ProteinID:
XP_008993257
LinkDB
All DBs
Position
4:130369809..130371963
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AA seq
525 aa
AA seq
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MSEFYFEGTGVATGGFTFGTAKTATTTAATGFSFSTSGTGGFNFGAPSQPAASTPSTSLF
SLATQTPATQTPGFSFGTATPASGGTGFSLWTGVSKLNLSNAAATPAMANPSGFGLGSGS
LTNAMPSTATSSQGTAPTGFVFGPSTTSVAPATTSGGFLFTGGSTAQTSGFNIGSVGNSA
QPTAPARLSFTPATPAATTAGATQPAVPTPTGTTTSAGPTLFASIATIPTSSATTGLSLC
TLATTAGAPATGTLGFILKAPGAASGTSTTTSTAATTTTSSTSSSSSTGSTGFALNLKPL
VPAGISSNTAAAMTAPPGPGAPAGVATTSAMTYAQLESLINKWSLALKDQEWHFFQLATQ
VNAWDRTLIENREKITRLHQEVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEELVKEQ
SGTIYLQDADKECEKTYELAENMGAQLKLMAQDLKAIIEHLNTSGSPADTSDLLQEICKL
LNAHMDSLQWINQNSALLQRKVEEVIKVCEARRKEQERSFRNTFN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttttattttgaaggcactggggtcgctacaggcgggttcacgtttggcacc
gcgaagacagcaacaaccacagctgccacggggttttctttctccacctctggcaccgga
gggtttaattttggggctccctcccaaccagccgcaagtacgccttccaccagcctgttc
tcacttgccacccagactccggccacacagacgccgggctttagttttggaacagcaact
cctgcttcggggggaactggattttctttgtggaccggtgtttcaaagctaaacctgagc
aatgcagctgccaccccagccatggcaaaccccagtggctttgggctgggcagcggcagc
ctcactaatgccatgccgagcactgccacctccagccagggcacagcacccactggcttt
gtgtttggcccctccaccacctcagtggctccagccaccacatccggagggttcttgttc
actggtggaagcacggcccaaacctctggtttcaacattggctcagtggggaattcagcc
cagcccacggcacctgccaggttgtccttcactccggccacgccagcagccaccacagca
ggcgccactcagccagctgtgcccacaccgactggcaccaccaccagtgctgggcccacc
ctcttcgcctcaatagcaaccattccaacctcgtccgccaccaccggcctctccctctgt
acccttgcgaccacagcaggagcccctgctactgggacactgggcttcatcttaaaggca
cctggagcagcttccggcacctccacaacaacatccactgctgccaccaccaccaccagt
agcaccagcagcagcagcagcaccggcagcaccggctttgccttgaatttaaaaccactg
gtgccagccgggatctccagcaatacggcagccgccatgactgctccacctggacctggt
gcccccgcaggggtggccaccacctctgccatgacctacgcacagctagagagcctgatc
aacaaatggagcctggcgctgaaggaccaggagtggcacttcttccagctggccacccag
gtcaacgcctgggaccgcacgctgattgagaacagggagaagatcaccagactgcaccaa
gaggtggagaaggtgaagctggaccagaagaggctggaccaggagctcgacttcatcctg
tcccagcagaaggagctggaagacctgctgagccctctggaggagctggtcaaggagcaa
agcgggaccatctacctgcaggacgcggacaaggagtgcgagaagacctacgagctggct
gagaacatgggcgcgcagctgaagctcatggcccaggacctcaaggccatcatcgagcac
ctgaacacatctgggtcccctgccgacaccagcgacctgctgcaggagatctgcaagctc
ctcaacgcgcacatggactcactgcagtggatcaaccagaactccgccctgctgcagagg
aaggtggaggaggtgatcaaggtgtgtgaggcccggcgcaaggagcaggagcgcagcttc
cgcaacacctttaactga
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