Callithrix jacchus (white-tufted-ear marmoset): 100403013
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Entry
100403013 CDS
T03264
Symbol
PCDHB4
Name
(RefSeq) protocadherin beta-4 isoform X2
KO
K16494
protocadherin beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100403013 (PCDHB4)
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Protocadherins
100403013 (PCDHB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100403013
NCBI-ProteinID:
XP_008984520
UniProt:
A0A2R8NDB3
LinkDB
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Position
2:37554722..37768727
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AA seq
770 aa
AA seq
DB search
MKKLERVHPNRQVLAFILVVFVSRVRPEPIRYSVLEETESGSFVAHLTKDLGLGTGELAA
RSARVVSDDDKQRLQLDGQTGDLLLREKLDREELCGHIEPCVLHFQVFLEMPVQFFQGEL
MIQDINDHSPVFPAREVLLKIPENSQTGTLFPLLIAEDLDVGSNGLQQYTISSNSHFHIL
TRNHSEGKKYPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIIDVNDNAPE
FVHTPYRVQVLENSPLDSPILRVLARDADAGNFGSVSYDLFQASDEIKQTFSINEVTGDI
LLKKKLDFEKIKSYHVEIEATDGGGLSGKGTVVIEVMDVNDNPPELIISSLTSSIPENAP
ETVVSIFRIRDRDSGDNGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETRDGYNITI
TVTDLGTPKLKTQQSLSVLVSDVNDNAPAFTQTAYTLFVRENNSPALHIGSVSATDRDSG
ANAQVTYSLLPPQDTQLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL
SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW
LSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPRSATATLHVL
LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS
VGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTELLLDDFPPS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctagagagagttcatccaaacaggcaagtgttggcctttattttggtggtg
ttcgtgtctcgggtccgccccgagcctattcgttattctgtgttggaggaaacagagagc
ggctcctttgtagcccatctgaccaaggatctgggcctgggaactggggaactggctgcc
aggtcagccagggtggtgtctgacgatgacaagcagcgtttgcagctggatggtcagact
ggagatttgcttctgagggagaaactagatcgggaagagctctgtggtcatattgaaccg
tgtgtactgcatttccaagtgttcctggaaatgccggtgcaattttttcaaggagaacta
atgatccaggacataaatgaccactctccagtattccctgcaagggaagtgctcttgaaa
ataccggaaaatagccagacggggactctatttccgttgttaatagcggaggatttggat
gtgggcagcaacggtctccaacaatacacaatcagctccaattctcattttcacattctc
actcgaaatcatagtgagggcaagaaatacccagatttggtgcaggacaaaccactggat
cgagaggagcagcctgagttcagcttaaccctcgtggcgctggatggtgggtctccacct
aggtctggcacggtcatggttcgaatcctgatcatagacgtcaatgacaatgctcctgag
tttgtgcacaccccatatcgggtgcaggtcctggaaaacagccccctagactctccaatt
cttagggtcttagctagagatgcagatgctggaaacttcgggagtgtttcttatgactta
ttccaagcatcagatgaaattaaacaaactttctcaataaatgaagtcacgggagacata
ctactgaagaaaaaattggatttcgaaaaaattaaatcttaccatgtagaaattgaggcc
acagatggaggaggcctttctgggaaaggcactgtagtcatagaggtgatggatgtgaat
gacaatcccccagaacttatcatatcttcactcaccagctccatcccagaaaatgctcct
gagacggtagtctctatctttcgaattcgagatagagattctggagacaatggcaagatg
atttgctctattccagataatctaccgtttattctaaaaccgactttgaagaatttttac
accctggtaacagagagaccactggacagagagaccagagacgggtacaacattaccatt
accgtaactgatttggggacacccaagctgaaaacccagcagagcttaagcgtgctggtc
tccgacgtcaacgacaacgcccccgccttcacacaaaccgcctacaccctcttcgtccgc
gagaacaacagccccgccctgcacatcggcagcgtcagcgccacagacagagattctgga
gccaacgcccaggtcacctactcgctgctgccgccccaggacacgcaactgcccctcgcc
tccctggtctccatcaacgcggacaacggacacctgttcgccctccggtcgctggactac
gaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgcggctccccggcgctg
agcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttcgtg
ctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggcggccgag
ccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaat
ggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaagcacaggctgctg
gtgctggtcaaggacaatggcgagcctccgcgctcggccaccgccacgctgcacgtgctc
ctggtggacggcttctcccagccctacctgccgctcccggaggcggccccggcccaggcc
caggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcgctcttc
ctgttctcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcggcctcg
gtgggtcgctgctcggtgcccgagggcccgtttccagggcatctggtggacgtgagcggc
accgggaccctgtcccagagctaccagtacgaggtgtgcctgacgggagactctgggact
gaattgctcctggatgattttcccccttcttga
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