Callithrix jacchus (white-tufted-ear marmoset): 100403110
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Entry
100403110 CDS
T03264
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100403110 (PRDM11)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100403110 (PRDM11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
Zn_ribbon_PRDM4
DUF7822
FOG1-like_PR
Phage-scaffold
PMG
DUF4954
Motif
Other DBs
NCBI-GeneID:
100403110
NCBI-ProteinID:
XP_035118308
LinkDB
All DBs
Position
11:106909847..106997592
Genome browser
AA seq
1274 aa
AA seq
DB search
MDVTEQVNMEPPPQCQLSRSGFSHYLSLSPRERGEGQQRIRLPDAREWRRLAWEAPGRLR
GMGSSSPDPLPQQEVNFSWEQLTGTQPGRTRHHHGLRMTENMKECLAQTKTAVGDMVTVV
KTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGRRDLIMPKSFQQVDFWFCESCQEYF
VDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFG
PYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQH
SECIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQALDN
PEDLRGPIHLPVLRQGKSPYKRGFDEGDIQPQAKKKKIDLIFKDVLEASLESAKVEAHQL
ALSTSLVIRKVPKYQDDAYSRRATTITHSVQNVGRTQGEGDWKVPQGISKEPGPLEDEEE
EPSSFKADSPAEASLASDAHELPTTSFCPNCIRLKKKVRELQAELDMLKSGKLPEPPVLP
PQVLELPEFSDPAASESMVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRR
IRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQS
NLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLALEGRPYLDFRPLAELLRKCELKV
VDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSIILDGQSDDLLADTVAVYVQYTSS
DGPPATEFLSLQELGFSSTESYLQALDRAFSALGIRLQDEKPTVGLGVDGANITASLRAS
MFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPCLEELENNLKQLLSFYRYSPRLMC
ELRSTAATLCEETEFLGDIRAVRWIIGEQNVLNALIKDYLDVVAHLKEVSSQTQRADASA
IALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYVFQGEYLLVSQVDDKIEEAIQEISRLA
DSPGEYLQEFEENFRESFNGIAMKNLRVAEAKFQSIREKICQKTQVILAQRFDSRSRIFV
KACQVFDLAAWPRSSEELMSYGKEDMVQIFDHLEAIPTFSRDVCREGLDPRGSLLMEWRE
LKADYYTKNGFKDLISHICKYKQRFPLLNKIIQVLKVLPTSTACCEKGRNALQRVRKNHR
SRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEKSGNSYTLSAEVLSRMSALEQKPA
LQTVDHGAEFYPDL
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcactgagcaagtaaatatggaaccgcccccacaatgtcagctttcccggagt
ggcttctcccactatctctcactttccccaagggaaaggggtgagggccagcaaaggatc
cggctgcctgatgccagggaatggagacgcctggcttgggaggctccaggacggctgagg
ggcatggggagcagctcaccagaccctctgccccagcaggaagtgaacttctcgtgggag
cagctgactgggacccagccggggcggactcggcaccatcatggcctaagaatgaccgag
aacatgaaggagtgcttggcccagaccaagacagctgtgggggatatggtgacggtggtg
aagacagaggtctgctcaccactccgtgaccaggagtatggccagccctgctctaggaga
ccagactcctctgccatggaagttgagcccaagaaactgaaggggaggcgtgacctcatc
atgcccaaaagctttcagcaagtggacttctggttctgcgagtcctgccaggagtacttc
gtggatgaatgcccaaaccatggccccccggtgtttgtgtctgacacgccggtacctgtg
ggcatcccagaccgggcggcgctcaccatcccacagggcatggaggtggtcaaggacacc
agtggagagagtgatgtgcgatgtgtaaatgaggttatccccaagggccacatcttcggc
ccctacgaggggcagatctccacccaggacaaatcggctggcttcttctcctggctgatt
gtggacaagaacaaccgctataagtccatagatggctcagacgagaccaaagccaactgg
atgaggtacgtggtcatatcccgggaggagagggagcagaacctgctggctttccagcac
agcgaatgcatctacttccgggcgtgcagggacatccggcctggggagtggctgcgggtc
tggtacagcgaggactacatgaagcgcctgcacagcatgtcccaggaaaccatccaccgc
aacctggccagaggagagaagaggttgcagagggagaagtctgagcaggctctggataac
ccagaagacctgaggggtcccattcatctccctgtgctgagacagggcaaaagtccctac
aagcgtggctttgatgagggggacatacaaccccaagccaagaagaagaaaattgacctg
attttcaaggatgttctggaggcctcactggaatctgcaaaggtagaagcccaccagttg
gccctgagcacctcactggtcatcaggaaagtccccaagtaccaggatgatgcctacagt
cggcgtgcaacaaccataacccatagtgtgcagaatgtaggccggacccagggggagggg
gactggaaggtcccccaggggatctccaaagagccaggcccattggaagatgaagaagag
gagccttcatcattcaaggccgacagtcctgccgaggcctcccttgcatctgatgctcat
gaacttcccaccacctctttttgccctaactgtattcgcctaaagaagaaggtgcgggag
cttcaggcagaattagacatgcttaagtctgggaaacttcctgagccccctgtattgcca
ccacaggtactggagctcccagagttctcggaccctgcagcctcagagagcatggtctct
ggccctgccatcatggaggacgatgaccaggaagtcgattcggcagatgaatctgtctcc
aacgatatgatgactgcaacagatgagccctccaagatgtcgtctgccaccgggcgccga
atccggcgctttaagcaggaatggctgaagaagttctggttcctgcggtactccccgacc
ctcaatgagatgtggtgccacgtctgccgccagtacacggtgcagtcctcacgcacctcg
gccttcatcatcggctccaagcagtttaagattcacaccatcaaactgcacagccagagc
aacctgcacaagaagtgcctgcagctgtacaagctccgcatgcacccagagaagacagag
gagatgtgtcgtaacatgaccctgctcttcaacaccgcctaccacctggccctggagggc
aggccctacctggacttccggcccctggcggagctgctgaggaagtgtgagctcaaggtg
gtagaccagtacatgaacgagggagactgccagatcctcatccatcacatcgcccgggcc
ctgcgagaagacctggtagagcgcatccgccagtcaccttgcctcagcatcatcctggat
gggcagagcgacgacctgctggccgacacggtggctgtctacgttcagtacaccagcagc
gacgggcccccagctacagagttcctgtccctgcaggagctggggttctctagcacagaa
agctatctccaggcacttgaccgggccttctcggccttgggcatccggttgcaggatgaa
aagccaactgtgggcttgggtgtagacggggccaacatcacagccagcctccgggccagc
atgttcatgacgatccgcaagaccctgccgtggctactgtgcctgcccttcatggtgcac
cggccccacctggagatcctggatgccatcagcgggaaagagctcccatgcctggaggag
ctggagaacaacctgaagcagctgctgagcttctaccgctactcgccacgcctcatgtgc
gagctgcggtccacggcggccaccctctgtgaggagacagaattcctgggggacatccgg
gcggtgcggtggatcatcggcgagcagaacgtcctcaacgccctcatcaaggactacctg
gacgtggtggctcatctcaaggaggtcagcagccagacccagcgggcagatgcctcggcc
atcgccctggccctgctgcagttcctcatggactaccagtccatcaagctcatctacttc
ctgctggacgtgatcgctgtgctctcacgcctggcctatgtcttccagggcgagtacctg
ctggtctcccaggtagatgacaagatcgaggaggccatccaggagatcagccggctggct
gactccccgggagaatacctgcaggagtttgaggagaacttccgagagagcttcaatggg
attgccatgaagaacctcagggtggctgaagccaagttccagtccatcagggagaagatc
tgccagaagacccaggtcatcctggctcagaggttcgactcccgcagccggatctttgtg
aaggcctgccaggtgttcgacctggctgcctggcccaggagcagtgaggagctgatgagc
tatggcaaggaggatatggtgcagatatttgatcacctggaggccatcccgaccttttcc
cgagatgtctgtagggaagggctggacccccggggcagtctgttgatggaatggcgagaa
ctcaaggcagattactacaccaaaaatggcttcaaagacctgatcagccacatttgcaag
tataaacagaggtttccactcttgaacaagatcatccaggttcttaaagtcctccccact
tccaccgcttgctgcgagaaaggccgcaacgccctccagcgagttcgcaaaaaccaccgc
tcccgcctgaccctggagcagcttagcgacctgttgacaatcgctgtaaatggaccgcca
attgccaattttgatgccaagcgagccctggacagctggtttgaggagaagtcagggaac
agttacacactgtccgcagaggtcctcagcaggatgtccgcgctggagcagaagccagca
ctacagaccgtggaccacggggcggagttttaccctgacctttag
DBGET
integrated database retrieval system
