Callithrix jacchus (white-tufted-ear marmoset): 100403113
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Entry
100403113 CDS
T03264
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X6
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100403113 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100403113 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
100403113 (LDB3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
100403113
NCBI-ProteinID:
XP_017834436
Ensembl:
ENSCJAG00000011521
LinkDB
All DBs
Position
12:38634881..38716327
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AA seq
664 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQSPLPVIPHQKDPTLDTSGSLAAP
SPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASPRAKTSPEGAWVP
LSPKALSGSSQPRQYNNPIGLYSAETLREMAQMYQLSLRGKASGAGLPGGSLPVKDLAVD
SASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEEALRRSRP
QTSSYGPAAATSSAPATHASYSEGPAAPPPKPRVVTTASIRPSVYQPVPASTYSPSPGAN
YSPTPYTPSPAPAYTPSPTPAYTPSPAPTYTPSPAPTYNPSPAPNYNPASSAAYSGGPAE
PASRPPWVADDSFSQKFAPGKSTTSISKQSLPRGGTAYTPAGPQVPPLARGTVQRAERFP
ASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYE
QFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYIN
LFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAH
AINV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagtgtgaccctgactgggcccgggccctggggcttccgtctgcaggggggc
aaggacttcaacatgcccctcactatctcccggatcacaccaggcagcaaggcagcccag
tcccagctcagccagggcgacctcgtggtggccattgacggcgtcaacactgacaccatg
acccacctggaggcccagaacaagatcaagtctgccagctacaacctgagcctcaccctg
cagaaatcgaagcgtcccattcccatctccacgacagcacccccagtccagtcccctctg
ccggtgatcccccaccagaaggaccccactctggacacgagcggcagcctggcggcaccc
agccccagccccgaggcaagggccagcccaggcacccccggcaccccggagctcaggccc
acctttagccctgccttctcccggccctccgccttctcctcactcgccgaggcctctgac
cctggccctccacgggccagcccgagggccaagaccagcccggagggggcctgggtccca
ctcagcccgaaagccctgtcgggctccagtcagccaaggcagtataacaaccccattggc
ctgtactcagcagagaccctgagggagatggctcagatgtaccagctgagcctccgaggg
aaggcctcaggtgccggactcccaggagggagcctccctgttaaggacctcgccgtagac
agcgcctctcccgtgtaccaggctgtgattaagaaccagaacaagccggaagacgaggct
gacgagtgggcccgccgctcctccaacctgcagtctcgctccttccgcatcctggcccag
atgacagggaccgaattcatgcaagaccctgatgaagaagctctgcgaaggtcaaggccc
cagacttcttcctatggccccgcagcggccacctcttcagcacctgccacccacgccagc
tacagtgagggtcctgccgcccctccacccaagccccgggttgtcaccactgccagcatc
cggccttctgtctaccagccagtgcctgcatctacctacagcccatccccaggggccaat
tacagtccaactccctataccccctcgcctgcccctgcctacactccctcacctacccct
gcctataccccctcacctgcccccacctacactccatccccagcaccaacatataaccct
tcacctgcccccaactataaccctgcatcctctgcggcctacagcgggggccctgcagag
cctgccagccgtcctccctgggtggcagatgacagcttctcccagaagtttgcccctggc
aagagcaccacctccatcagcaagcagagcctgccccgtgggggcacagcctacacccca
gcgggtccccaggtgccaccacttgccagggggaccgtccagagggctgagcgcttccca
gccagcagccggactccactctgtggccactgcaacaacgtcatccggggcccatttctg
gtagccatgggccgttcctggcaccctgaagagttcaactgtgcctactgcaagacttcc
ctggcagatgtatgctttgtggaagagcagaacaacgtttactgtgagcgatgttatgag
caattctttgccccaatctgtgccaagtgcaacaccaaaattatgggggaagtgatgcat
gccttgagacagacgtggcacacaacctgctttgtctgcgcggcctgcaagaagcctttc
gggaacagcctcttccacatggaggatggggagccctactgtgagaaagactacatcaat
ctgttcagcaccaagtgtcatggctgcgatttccccgtggaggctggcgacaagtttatt
gaagccctggggcacacctggcatgacacctgcttcatttgcgcggtctgccatgtgaat
ctggaggggcagccgttctactctaagaaggacagacccctgtgcaagaagcacgcacac
gccatcaatgtgtag
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