Callithrix jacchus (white-tufted-ear marmoset): 100403115
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Entry
100403115 CDS
T03264
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100403115 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100403115 (JMJD1C)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100403115 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
100403115
NCBI-ProteinID:
XP_035124147
Ensembl:
ENSCJAG00000007163
UniProt:
F6VGP7
LinkDB
All DBs
Position
12:63554279..63900450
Genome browser
AA seq
2540 aa
AA seq
DB search
MAVETRPELVGKRFLCVAVGDEARQERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERS
IPSSVTAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLHEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRANQNINAVHSHYTRAQANSPRPAMNSQAAVPKQNT
HQQQQQRSIRPHKRKGSDSSIPDEEKMKEEKYDYISRGENPKGKNKHLMNKRRKPEEDEK
KLNMKRLRTDNVSDFSESSDSENSSKRIIDNSSEQKPENELKNKNTSNINGEEGKPHNNE
KSGEETLKDNQSPWDQIQEDKTHEEAEKQKSVDTQLQEDMIIHSSEQSTPSDHNPNDLLP
QECNMEKTRTVELLPKEKFVSRPPTPKCVIDITNDTNLEKVAQENSSTFGLQTLQKMDPN
VSDSKHSIANAKFLEITKQDSDQSWVSEVVKVDLTQSSVINASSGNDNLNMEKEKYVSYI
STLSAVSVMEDKLHKRSPPPETIKSKLNTSVDTHKIKSSPSPEVVKPKITHSPDSVKSKA
TYVNNQPTGERRLANKIEHELSRCSFHPIPTRSSTLETTKSPLIIDKNEHFTVYRDPALI
GSETGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTH
PLTSGPHHAVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQ
SPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAEASLRRNS
PSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKTLADHHKEELER
KAFMEPLRSVASTSTKNDLDLNRAQTGKDCHLHRHFVDPVLNQLQRPPQETGERLNKYKE
EHRRILQESIDVAPFTTKIKGLEGERENYSRVASSSSSPKSHVIKQDTDVERSVSDLYKM
KHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYSDKQSNALAVAAANPQTLTSFI
TSLSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTAFRNDCRSPTHLTVSSTNTLRSM
PALHRAPVFHPPIHHSLERKEGSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDS
QANFKSSSEQSLTEMWKPNNNLSKEKTEWHVEKSSGKLQAAMASVIVRPSSSTKTDSMPA
VQLASKDRVSERSSAGAHKTDCLKPAEAGETGRIILPNVNSDSVHTKSEKNFQAVSQGSV
PSSVMSAVNTMCNTKTDVITSVAATTSVSSWGGSEVTSSLSNTILAPTSSECTSSKSISQ
PVAQTQECKVSTTAPVILASSKTGSVVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVS
ETESNAIKYQTSSASLPLDSTVICSTINKANSVGNGQASQTSQPNYHTKLKKAWLTRHSE
EDKNTNKMENSGNSVSEIIKPCSVNLIASTSGDIQNSVDSKIIVDKYIKDDKVNRRKAKR
TYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKTEIEEDLKPNGVLSRSAKE
KSKLKLQSNSTTGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSK
KGEEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDEEAMSLWTHENYEDDELDIE
TSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVC
QKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSILTDLLDAM
HTLREKYGIKSHCHCTNKQNLQVGNFPAMNGVSQVLQNVLNHGNKISLCMPESQQQNTPQ
KSEKNGSSSPESDVGTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLEKQIKEER
EQDNSESPNGRTSPLVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGAPSSK
SGRTMPNILDDIIASVVENKIPPSKTSKINVKPELKEEPEESRISAVDENNKLYSDIPHS
WICEKHILWLKDYKNSNNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQA
DLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPTRYED
LLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVS
DVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVD
KIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVL
PAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLKEEINYDDKLQVKNILYHAV
KEMVRTLKIHEDEVEDMEEN
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcgtagcggtcggc
gacgaggcgcgtcaggagcgctgggagagcggacgcggctggcgaagctggcgagcgggg
gtcatccgagccgtgtcacacagggacagccgcaatccggacctagcggtgtatgtggaa
tttgatgatcttgaatgggataaacgagagtgggttaaagtttatgaagatttttcaact
ttcttggtggaataccacttaatctgggccaaaaggaatgaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgcattgactttcaaacctctggttgaaagaagt
atacccagttcagtcactgcagtagaattccttgtagataagcaactggattttttaact
gaagatagtgcctttcagccctaccaggacgacatagacagcctaaacccagttctcagg
gacaacccgcaacttcacgaggaagtgaaagtctgggtaaaggaacaaaaggttcaggag
atttttatgcaaggtccttattccttaaatggatacagagtgagagtatatagacaagac
tctgccacccagtggtttactggcataattactcatcatgatctcttcacccgcaccatg
atcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatca
cggcgcaggtctcgtgccaatcaaaacatcaacgctgttcacagtcattacacacgtgcc
caagcaaatagtcctagaccagcaatgaactcacaagctgctgtaccaaaacagaatacg
caccagcaacagcaacaaagaagtatccgtccacataagaggaagggctcagatagcagt
ataccagatgaagagaagatgaaggaggaaaaatatgattatatatcacgaggagaaaat
cctaaaggtaaaaacaaacacttgatgaataaaagaaggaaacctgaggaagatgaaaag
aaactaaatatgaaaagacttcgaactgacaatgtttcagacttttctgagagcagtgac
tcagaaaattcaagtaagagaataatagataattcctcagaacagaagccagagaatgaa
ttgaaaaataaaaatacttcaaatataaatggagaagaaggaaaaccccataataatgag
aagtcaggagaagagaccctaaaagataaccagtctccctgggatcaaatacaggaagat
aaaacacatgaagaagcagagaagcagaagtctgttgacactcagcttcaagaagatatg
attatccattcatcagaacagtccacaccttctgatcataatcctaatgatttacttcct
caggaatgtaatatggaaaaaacacgtacagtggaattactaccaaaggagaagtttgta
tccagaccacccacaccaaaatgtgttattgatattacaaatgacactaatttagaaaag
gtggctcaggaaaactcaagtacctttggccttcagacacttcagaaaatggatcctaat
gttagtgattcaaaacactctattgcaaatgcaaaattcttggaaataacaaaacaagat
tctgatcagagctgggtcagtgaggtagttaaagtggatttaacccaatcaagtgttata
aatgcttcttcaggaaatgataacttgaacatggaaaaagagaagtatgtctcttatatt
tctactttaagtgcagtttctgtcatggaagataagctgcataagcgaagtccacctcca
gagactataaaatctaaacttaatacttcagtagatactcacaagataaaatccagtccc
tcacctgaagttgttaaacccaaaataactcattctcctgattctgtaaagtctaaggcc
acttatgtgaacaaccaacctactggtgaaagaagactggcaaataagatagaacatgag
ctatcaagatgcagttttcatccaattcctactcgaagcagtacattagaaactacaaag
agtcctcttatcattgataaaaatgagcattttacagtttacagagatcctgcacttatt
gggtcagaaacaggagctaatcatatttcacctttcctaagccagcatccttttcctctt
cactcttcatctcatagaacctgtttaaatccaggtacccatcatcctgccttaactcct
gcaccccacttactagccggatcatccagtcaaactccattacctaccattaacactcac
cctctgactagtggtccacaccatgctgtccatcaccctcatttacttcccactgtgtta
cctggagtgcctactgcctccttacttggtggccacccacgactagagagtgctcatgcc
agcagcttgagccacttagcactagcacaccagcaacaacaacagttgttacagcaccag
tcacctcatcttcttggacaagcccatccttctgcttcatataatcagcttggactttat
ccaattatttggcagtatccaaatggaacacatgcatactcaggacttggtttgccttct
tctaagtgggttcacccagaaaatgcagttaatgctgaggcttcattaaggaggaattct
cccagtccttggctacatcagcccacccctgtgacctcagcagatggtattggattactt
agtcacattcctgtcagaccttccagtgcagagcctcatcggcctcttaaaattacagcc
cattccagtccaccattgacaaaaactttagcagatcatcataaggaagaattggaaagg
aaagcttttatggaaccactacggtctgttgcatccacatcaacaaaaaatgacctggat
ctaaatcgggcacagactggaaaagattgtcacttacataggcattttgtggatccagta
ttaaatcaattacagaggccaccccaggagactggagagagattaaacaaatacaaagag
gaacaccgtcgaattcttcaagaaagtattgatgttgctccctttacaactaaaatcaag
ggacttgagggtgaaagagagaattattccagagtggcatcatcatcttccagtcctaaa
agccatgtcatcaaacaagatacagatgtagaacgctcagtatcagatctttataaaatg
aagcactcagtgcctcagagtttaccccaaagtaactatttcactacattgtctaatagt
gtggtcaatgaaccaccaagatcatacccatccaaagaagtttcaaatatttacagtgat
aaacagagtaatgcccttgcagtggcagcagctaatcctcaaactctgacttcatttata
acatctctttcaaagcctccacctttgattaaacaccaaccagaaagtgaaggtttagta
ggcaagataccggagcatcttccacatcagattgcatctcactcagtaacagccttcaga
aatgattgtaggagtcctacccatttgacagtttcttctacaaatacactccgcagtatg
cctgcattacatagagcaccagtatttcacccaccaatccatcacagcctggaaagaaag
gaaggtagctatagtagcctttcccctccaactttaactccagtgatgccagtaaatgct
ggtgggaaagttcaagaatcgcagaagcctccaactctaatacccgagccaaaagactct
caggcaaattttaagagttcttcagaacagagtttgacagagatgtggaaacctaataat
aacctcagcaaagagaaaaccgaatggcatgtggagaaaagcagcggaaagttacaggct
gcaatggcatctgtcattgtgcgtccatcttctagtacaaaaacagatagcatgccagca
gtgcagttagcttctaaagatcgagttagtgaaagatcttcagctggggcacataaaaca
gattgcctcaaaccagcagaagctggagaaactggaagaatcattttgccaaatgtgaat
tcagacagtgttcacacaaaatctgaaaaaaactttcaggctgtctcacagggcagtgtt
cccagttcagtcatgtctgctgtaaatacaatgtgtaataccaaaacggatgtcatcaca
tctgttgccgctactaccagtgtttccagctggggtggttcagaagtaacttcatctcta
tcaaataccattttggcccctacatcatcagaatgtacatcttcaaaaagtatcagtcag
ccagtggctcaaacacaagaatgcaaggtcagcaccacagctccagttatattagccagt
agtaagacaggaagtgttgttcagcccagttctgggttctcaggcacaactgattttatc
catttgaaaaagcacaaggcagcactggctgcagctcagtataaaagtagtaatgttagt
gagactgaatctaatgctataaaatatcagacatcttcagcctcccttcctctggatagc
actgtaatctgtagtacaattaacaaagcaaactctgtaggaaatgggcaagcttcccag
acaagtcaaccaaactaccatactaaactgaaaaaggcctggctcaccagacattcagaa
gaagataaaaatactaataaaatggaaaattcagggaattctgtatcagaaattattaag
ccatgttctgtcaacttaatagcctctacatctggtgatatacaaaatagtgtagatagt
aagatcatagttgataaatatataaaagatgataaagtcaataggaggaaagccaaaaga
acttatgaatctggctctgaaagtggagactcagatgaaagcgaaagcaagtcagagcaa
aggactaaaaggcaaccaaagccaacttacaaaaagaagcaaaatgatttgcagaagaga
aaaactgaaatagaagaagatttgaaacccaatggagttctaagcaggagtgccaaagaa
aaaagtaaattgaagttgcaaagcaacagtactactggcattcctcgttcagtattaaaa
gattggcgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggatgactcc
tgctgtgagatagggcctaatttacaaaagtgccgagaatgcagacttattcgcagtaaa
aaaggagaagaaccagctcactcaccggtattttgtagattttactactttagacgattg
tcatttagtaaaaatggagtagttagaatagatggtttctcttctcctgaccaatatgat
gaagaagctatgagtttgtggacacatgaaaattatgaagatgatgaactagatatagaa
acttctaaatatatcttggatataataggggataagttctgtcaattagtaacatctgaa
aaaacagctttgtcgtgggtgaaaaaggatgccaaaattgcctggaaaagagcagtgaga
ggagtccgggagatgtgtgatgcatgtgaagcaacattgtttaacattcactgggtctgc
caaaaatgtggatttgtggtctgcttagattgttacaaggcaaaggaaaggaagagttct
agagataaagaactatatgcttggatgaagtgtgtgaagggacagcctcatgatcacaaa
catttaatgccaacccaaattatacctggttctattttgacagatcttctagatgccatg
cacactcttagggaaaaatatggtattaaatctcattgtcattgtactaacaaacagaat
ttacaagttggaaattttcctgcaatgaatggtgtatctcaagttttacagaatgttctt
aatcatggtaataaaatttctctgtgcatgcctgagtctcagcagcaaaatactcctcag
aagtctgagaaaaatggcagcagcagcccagagagtgatgtaggcacagataacaagtta
actcctccagaatcccagtcaccactgcactggttagcagatcttgcagagcaaaaagcc
agagaggaaaaaaaagaaaacaaagaacttacccttgaaaaacaaattaaagaagagaga
gaacaagacaactctgaatctccaaatggcagaacatcacctcttgtgtcccagaataat
gaacaaggctcaaccttacgggatttgctgactacaacagctggaaagctacgtgtgggt
tctacagatgctggcattgcctttgccccagtatattcaatgggagctccaagtagcaaa
agtggacggactatgcctaacattcttgatgacataattgcttcagttgttgaaaacaaa
attccaccaagtaaaacctccaaaataaatgtaaaaccagagcttaaagaagagcctgaa
gaaagcagaatatctgcagtggatgaaaataataaattgtacagtgatataccacattct
tggatctgtgagaagcatattttatggcttaaggattataagaatagcaataattggaaa
cttttcaaagaatgttggaaacaaggacagcctgcagtggtttctggtgtgcataagaaa
atgaacattagcctatggaaggcggaatcaattagtcttgattttggagaccaccaagct
gatctcctgaactgcaaagatagcatcatttcaaatgccaatgttaaggaattctgggat
ggttttgaagaagtttcaaaacggcagaaaaacaaaagtggagaaacagttgttttaaaa
ttgaaagattggccttcaggagaagacttcaagactatgatgccaacaagatacgaagat
cttttaaaaagtctaccattgccagaatattgtaatccagaaggaaaattcaatttggcc
tctcatttgccaggattttttgtacgtcctgatctaggacccaggttgtgcagtgcctat
ggtgtagttgctgctaaagatcatgatataggaacgacaaatctccatattgaagtttct
gatgttgtaaatattctagtctatgttggcatagcaaaaggaaatggcattctctcaaaa
gcaggaatactcaagaaatttgaggaagaagatttggatgacattttaaggaaaagactg
aaggactcaagtgaaatacctggtgctctgtggcatatttatgctgggaaagatgttgac
aagataagagaatttctccaaaagatttcaaaagaacaaggccttgaagttctaccagaa
catgatccaatacgtgaccaaagttggtatgtgaacaaaaagctccgccaaaggctgctt
gaagaatatggagtcagaacctgtactcttattcagttccttggtgatgctattgttttg
ccagcaggagcccttcatcaggttcagaattttcacagctgtattcaggtaactgaagac
tttgtatctccagaacatcttgtagagtcatttcatttaacacaggaactgagactttta
aaggaagaaatcaattatgatgataaactacaggttaaaaatattttgtatcatgcagtc
aaagaaatggtgagaaccttgaagatacatgaggatgaagtagaggatatggaagaaaat
taa
DBGET
integrated database retrieval system
