Entry |
|
Symbol |
VCP
|
Name |
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
|
KO |
K13525 | transitional endoplasmic reticulum ATPase |
|
Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
|
Pathway |
cjc04141 | Protein processing in endoplasmic reticulum |
cjc05022 | Pathways of neurodegeneration - multiple diseases |
|
Brite |
KEGG Orthology (KO) [BR:cjc00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100403131 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100403131 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100403131 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100403131 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
100403131 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cjc03019]
100403131 (VCP)
03009 Ribosome biogenesis [BR:cjc03009]
100403131 (VCP)
04131 Membrane trafficking [BR:cjc04131]
100403131 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:cjc04147]
100403131 (VCP)
Messenger RNA biogenesis [BR:cjc03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100403131 (VCP)
Ribosome biogenesis [BR:cjc03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100403131 (VCP)
Membrane trafficking [BR:cjc04131]
SNARE
SNARE associated proteins
Others
100403131 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100403131 (VCP)
Exosome [BR:cjc04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100403131 (VCP)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(138967919..138984074)
|
AA seq |
806 aa
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG |
NT seq |
2421 nt +upstreamnt +downstreamnt
atggcttctggagccgattcaaaaggtgatgacttatcaacagccattctcaaacagaag
aaccgtcccaataggttaattgttgatgaagccatcaatgaggacaacagtgtggtgtcc
ttgtcccagcccaagatggatgaattgcagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagagacgagaagctgtttgcatcgtcctttctgatgacacgtgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgtgtacgcctaggggatgtcatc
agcatccagccatgccctgatgtgaagtatggcaaacgtatccatgtgctgcctattgat
gacacggtggaaggcattactggtaatctctttgaggtataccttaagccgtacttcctg
gaagcttatcgacccatccggaaaggagacatttttcttgtccgtggtgggatgcgtgct
gtggagttcaaagtggtggaaacagatcctagcccttactgcattgttgctccagacaca
gtgatccactgcgaaggggagcctatcaaacgagaggatgaggaagagtccttgaatgaa
gtagggtatgatgatattggtggctgtaggaagcagctggctcagataaaggagatggtg
gaactgcccctgagacatcctgccctctttaaggcaattggtgtgaagcctcctagagga
atcctgctttatggacctcctgggacagggaagaccctgattgctcgagctgtagcaaat
gagactggagcattcttctttttgatcaatggtcctgagatcatgagcaaattggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggctgagaagaatgctcctgccatc
attttcattgatgagctggatgccatcgctcccaaaagagagaaaacacatggcgaggtg
gagcggcgtattgtatcacagttgttgaccctcatggatggcctaaagcagagagcacat
gttattgtcatggcagcaaccaacagacccaacagcattgacccagctctacggcgattt
ggtcgttttgaccgggaggtagatattggaattcctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaagctggcagatgatgtggacctggaacaggtagcc
aatgagactcatgggcatgtgggtgctgacttagcagccctgtgctcagaggctgctctg
caagccatccgcaagaagatggatctcattgacctagaggatgagaccattgatgccgag
gtcatgaactctctagcagttactatggatgacttccggtgggctttgagccagagtaac
ccatcagcactgcgggaaactgtggtagaggtgccacaggtaacctgggaagacatcggc
ggcctagaggatgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcaccca
gacaaattcctcaagtttggcatgacaccctccaagggagttctgttctatggacctcct
ggctgtgggaaaactttgttggccaaagccattgctaatgaatgccaggccaacttcatt
tccatcaagggtcctgagcttctcaccatgtggtttggggagtctgaggccaatgtcaga
gaaatctttgacaaggcccgccaagctgccccctgtgtgctattctttgatgagctggat
tcgattgccaaggctcgtggaggtaacattggagatggtggtggggctgctgaccgagtc
atcaaccagatcctgacagaaatggatggcatgtccacaaaaaagaatgtgttcataatt
ggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgat
cagctcatctatatcccacttcctgatgagaagtcccgtgttgccatcctcaaggctaac
ctgcgcaagtccccagttgccaaggatgtggacttggagttcctggctaaaatgactaat
ggcttctctggagctgacctgacagagatttgccagcgtgcttgcaagctggccattcgt
gaatccatcgagagtgagattaggcgagaacgagaaagacagacaaacccatcagccatg
gaggtagaagaggatgatccagtgcctgagatccgtcgagatcactttgaagaagccatg
cgctttgcgcgccgttctgtcagtgacaatgacattcggaagtatgagatgttcgcccag
acccttcagcagagtcggggctttggcagcttcagattcccttcagggaaccagggtgga
gctggccccagtcagggcagtggaggcggcacaggtggcagtgtatacacggaagacaat
gacgatgacctgtatggctaa |