KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100403131
Entry
100403131         CDS       T03264                                 
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04137  Mitophagy - animal
cjc04141  Protein processing in endoplasmic reticulum
cjc05014  Amyotrophic lateral sclerosis
cjc05022  Pathways of neurodegeneration - multiple diseases
cjc05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100403131 (VCP)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    100403131 (VCP)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    100403131 (VCP)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100403131 (VCP)
   05022 Pathways of neurodegeneration - multiple diseases
    100403131 (VCP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100403131 (VCP)
   03009 Ribosome biogenesis [BR:cjc03009]
    100403131 (VCP)
   04131 Membrane trafficking [BR:cjc04131]
    100403131 (VCP)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100403131 (VCP)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100403131 (VCP)
Ribosome biogenesis [BR:cjc03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    100403131 (VCP)
Membrane trafficking [BR:cjc04131]
 SNARE
  SNARE associated proteins
   Others
    100403131 (VCP)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    100403131 (VCP)
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100403131 (VCP)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 AAA_22 TIP49 AAA_14 NPHP3_N RNA_helicase Vps4_C AAA_28 nSTAND3 Parvo_NS1 Mg_chelatase AAA_17 ATPase_2 IstB_IS21 AAA_18 AAA_7 ATPase DUF815 ABC_tran AAA_24 NB-ARC TsaE ResIII NACHT Sigma54_activat Viral_helicase1 SLFN-g3_helicase KAP_NTPase DUF3944 Zot
Other DBs
NCBI-GeneID: 100403131
NCBI-ProteinID: XP_035106915
Ensembl: ENSCJAG00000008995
UniProt: U3EUB9
LinkDB
Position
1:complement(138967919..138984074)
AA seq 806 aa
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcttctggagccgattcaaaaggtgatgacttatcaacagccattctcaaacagaag
aaccgtcccaataggttaattgttgatgaagccatcaatgaggacaacagtgtggtgtcc
ttgtcccagcccaagatggatgaattgcagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagagacgagaagctgtttgcatcgtcctttctgatgacacgtgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgtgtacgcctaggggatgtcatc
agcatccagccatgccctgatgtgaagtatggcaaacgtatccatgtgctgcctattgat
gacacggtggaaggcattactggtaatctctttgaggtataccttaagccgtacttcctg
gaagcttatcgacccatccggaaaggagacatttttcttgtccgtggtgggatgcgtgct
gtggagttcaaagtggtggaaacagatcctagcccttactgcattgttgctccagacaca
gtgatccactgcgaaggggagcctatcaaacgagaggatgaggaagagtccttgaatgaa
gtagggtatgatgatattggtggctgtaggaagcagctggctcagataaaggagatggtg
gaactgcccctgagacatcctgccctctttaaggcaattggtgtgaagcctcctagagga
atcctgctttatggacctcctgggacagggaagaccctgattgctcgagctgtagcaaat
gagactggagcattcttctttttgatcaatggtcctgagatcatgagcaaattggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggctgagaagaatgctcctgccatc
attttcattgatgagctggatgccatcgctcccaaaagagagaaaacacatggcgaggtg
gagcggcgtattgtatcacagttgttgaccctcatggatggcctaaagcagagagcacat
gttattgtcatggcagcaaccaacagacccaacagcattgacccagctctacggcgattt
ggtcgttttgaccgggaggtagatattggaattcctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaagctggcagatgatgtggacctggaacaggtagcc
aatgagactcatgggcatgtgggtgctgacttagcagccctgtgctcagaggctgctctg
caagccatccgcaagaagatggatctcattgacctagaggatgagaccattgatgccgag
gtcatgaactctctagcagttactatggatgacttccggtgggctttgagccagagtaac
ccatcagcactgcgggaaactgtggtagaggtgccacaggtaacctgggaagacatcggc
ggcctagaggatgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcaccca
gacaaattcctcaagtttggcatgacaccctccaagggagttctgttctatggacctcct
ggctgtgggaaaactttgttggccaaagccattgctaatgaatgccaggccaacttcatt
tccatcaagggtcctgagcttctcaccatgtggtttggggagtctgaggccaatgtcaga
gaaatctttgacaaggcccgccaagctgccccctgtgtgctattctttgatgagctggat
tcgattgccaaggctcgtggaggtaacattggagatggtggtggggctgctgaccgagtc
atcaaccagatcctgacagaaatggatggcatgtccacaaaaaagaatgtgttcataatt
ggcgctaccaaccggcctgacatcattgatcctgccatcctcagacctggccgtcttgat
cagctcatctatatcccacttcctgatgagaagtcccgtgttgccatcctcaaggctaac
ctgcgcaagtccccagttgccaaggatgtggacttggagttcctggctaaaatgactaat
ggcttctctggagctgacctgacagagatttgccagcgtgcttgcaagctggccattcgt
gaatccatcgagagtgagattaggcgagaacgagaaagacagacaaacccatcagccatg
gaggtagaagaggatgatccagtgcctgagatccgtcgagatcactttgaagaagccatg
cgctttgcgcgccgttctgtcagtgacaatgacattcggaagtatgagatgttcgcccag
acccttcagcagagtcggggctttggcagcttcagattcccttcagggaaccagggtgga
gctggccccagtcagggcagtggaggcggcacaggtggcagtgtatacacggaagacaat
gacgatgacctgtatggctaa

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