Callithrix jacchus (white-tufted-ear marmoset): 100403143
Help
Entry
100403143 CDS
T03264
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100403143 (PDZRN3)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100403143 (PDZRN3)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100403143 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100403143
NCBI-ProteinID:
XP_017820517
Ensembl:
ENSCJAG00000015181
UniProt:
F6XI24
LinkDB
All DBs
Position
15:complement(48975955..49213528)
Genome browser
AA seq
783 aa
AA seq
DB search
MGCSLCSLQKQEEQYKLLYEVCQVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTK
MFTPPSESQLVDTGTQTDITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYI
GDIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGR
IREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDL
HMDMLEEQHHQAMQFTASVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDES
SEQENNGDDATASSNPLAGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDEC
ERFRELLELKCQVKSATPYGLYYPSGPLDAGKSDPENVDKELELLNEELRSIELECLSIV
RAHKMQQLKEQYRESWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGES
CRSTPLTLEISPDNSLRRAAEGISCPGSEGAVGTTEAYGPAPKNLLSITEDPEVGTLSYS
PSLKELDPSQPLESKERRASDRSPSPTPSQKLGSAYLRSYHHSPYKHAHIPAHAQHYQSY
MQLIQQKSAVEYAQSQMSLVSMCKDLTSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLL
RERALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCL
KEQQAADDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSV
TTV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcagtctgcagaagcaagaggagcagtacaaattactctatgaa
gtttgtcaggtcaacggcaaagacttatccagagcaactcatgaccaggctgtggaagct
ttcaagacagccaaggagcccatagtggtacaggtgttgagaagaacgccgaggaccaaa
atgttcacacctccgtcagagtcacagctggtagacacaggaacccaaaccgacatcacc
tttgaacacatcatggccctcactaagatgtcctctcccagcccgcccgtgctggatccc
tatctcttgccagaggagcatccctcagcccatgaatactacgatccaaatgactacatt
ggagacatccatcaggagatggacagggaggagctggagctggaggaagtggacctctac
agaatgaacagccaggacaagctgggcctcactgtgtgctaccggacggatgacgaagat
gacattgggatttatatcagtgagattgaccctaacagcattgcagccaaggatgggcgc
atccgagaaggagaccgcattatccagattaatggaatagaggtgcagaatcgtgaagag
gctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgattgcaagacct
gaactccagctggatgagggctggatggacgatgacagaaatgactttctggatgacctg
cacatggacatgctggaggagcagcaccaccaagccatgcagttcacagctagtgtgctt
cagcagaagaagcacgaggaagatggcggaaccacagatacagccaccatcttgtccaac
cagcacgagaaggacagtggtgtggggcggaccgacgagagcacccgcaatgacgagagt
tcggagcaggagaacaatggcgacgacgccaccgcatcctccaacccgctggcggggcag
aggaagctcacctgtagccaggacaccttgggcagcggcgacctgcccttcagcaacgag
tccttcatctcggctgactgcacggacgctgactacctggggatcccggtagacgagtgc
gagcgcttccgcgagctcctggagctcaagtgccaggtgaagagtgccaccccctatggc
ctgtactaccctagcggccccctggacgccggcaagagcgaccccgagaatgtggacaag
gagctggagctgctgaatgaggagctgcgcagcatcgagctggagtgcctgagcatcgtg
cgagcccacaagatgcagcagctcaaggagcagtaccgcgagtcctggatgctgcacaac
agcggcttccgcaactacaacaccagcatcgacgtgcgcaggcacgagctctcggacatc
accgagctcccagagaaatccgacaaggacagttcgagcgcctacaacacgggcgagagc
tgccgcagcaccccactcaccctggagatctcccccgacaactccttgaggagagcagca
gagggcatcagctgcccgggcagcgaaggggccgtggggaccacggaagcctatgggcca
gccccaaagaatctgctttccatcacggaagatcccgaagtgggcacccttagctacagc
ccatccctgaaggagttagaccccagccagcccctggagagcaaagagcggagagccagc
gaccggagcccgagccccacgcccagccagaagctgggcagcgcctacctgcgctcctac
caccactccccgtacaagcacgcgcacatcccggcgcacgcccagcactaccagagctac
atgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatgagcctggtg
agcatgtgcaaggacctgacctcccccaccccatcggagccacgcatggagtggaaggtg
aagatccgcagcgacgggacacgctacataaccaagcggccagtgcgggatcgcctgctg
cgggagcgagcgctgaagatccgcgaggagcgcagcggcatgaccactgacgatgacgcg
gtgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcagcacctggtg
aaggccaaggagcagcggcggcggcgcgaattcatgatgcagagcaggttggattgtctc
aaggagcagcaagcagccgacgacaggaaggagatgaacatcctggaactgagccacaaa
aagatgatgaagaagagaaataaaaagatcttcgataactggatgactattcaagaactc
ttaacccatggcacaaaatccccagacggcactagagtatacaattccttcctgtcagtg
actactgtataa
DBGET
integrated database retrieval system
