Callithrix jacchus (white-tufted-ear marmoset): 100403262
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Entry
100403262 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin-like
KO
K10867
nibrin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03440
Homologous recombination
cjc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100403262
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100403262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100403262
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100403262
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100403262
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100403262
BRCA1-C complex
100403262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
Nbs1_C
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
100403262
NCBI-ProteinID:
XP_035143426
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All DBs
Position
2:complement(41874225..41876856)
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AA seq
624 aa
AA seq
DB search
MQNGFSLNLKSGDSITFGVFASKFRIEYEPLVACSSGLDVSGKTALNQAILQLGGLTVNN
WTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEFLKAVQSKKQPPQIESFHPPLDE
PSIGSKNIDLSGRQERKQIFKGKTFIFLNAKQHKKLSSAVVLGGGKARLITEENEEHNVF
LAPGTCVVDIGITNSQILIPDSQKKWIQSVMDMLQRQGLRPIPEAEIGLAVIFMTIKNYC
DPQGHPSTGLKTSTPGPSLSQGLSFDEKLIPSAPVNTTTYVADTESEQADTCMDLSERPK
EIEVSNMEQNFKMLSQDTSTIKESCKTSSNNNSMVSHPLVKMTIPSYQLXPTQFLSVNKS
KDRASQQQQTNSIRNYFKLSTKKRERDEENQEMSSCKSARIEMSCSLLEQTQPATPSLWK
NKEPVDKKSDNLFTDIDLESSVKNSASKSHSAEELRSNKKREMDDVAIEDEILEQLFKDT
KPELEIGVKVQKQEEDVNIRKRPRMDIETNDTFSDEAVPESSEMSQENEIGMKRELKKES
LWSTKVEISNNDKLQDESEMLPRKVLLTEFKSLVIKNPTSRNLSGISDDYGQLKNFKKFK
KVTYPGAGKLPHTIGGSDLIAHHA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatggcttttccctaaatttgaagtcgggggatagtattacctttggagtgttt
gcaagtaaattcagaatagagtatgagcctttggtcgcatgctcttctggtttagatgtc
tctgggaaaactgctttaaatcaagctatattgcaacttggaggacttactgtcaacaat
tggacagaagaatgcacccaccttgtcatggtatcagttaaagttaccattaaaacaata
tgtgcactcatttgtggacgtccaattgtaaagccagaatattttactgaattcctgaaa
gcagttcagtccaagaaacagcctccacaaattgaaagttttcacccacctcttgatgag
ccatctattgggagtaaaaatattgatctgtcaggacgacaggaaagaaaacaaatcttc
aaagggaaaacatttatatttttgaatgccaaacagcataagaaattgagttctgcagtt
gtccttggaggtgggaaagctaggttgataacagaagaaaatgaagaacataatgtcttt
ttggctccaggaacttgtgttgttgatataggaataacaaactcacagatcttaattcct
gattctcagaagaaatggattcagtcagtaatggatatgctccaaaggcaaggccttaga
cctattcctgaagcagaaattggattggcagttattttcatgactataaagaattactgt
gatcctcagggccaccccagtacaggattaaagacgagtactccaggaccaagcctttca
caaggcttgtcatttgatgaaaaactgataccaagcgccccagtgaacactacaacatat
gtggctgatacagaatcagagcaagcagatacctgtatggatttgagtgaaaggccaaaa
gaaatcgaagtctccaacatggaacaaaatttcaaaatgctttcacaagacacatccact
ataaaggagtcctgcaaaacaagctctaataataatagtatggtgtcacatcctttggtt
aagatgacaattccaagctatcagctttgaccaactcaattcctgagtgtaaataaaagt
aaagatagggcttctcagcaacagcagaccaactccattagaaactactttaagctgtct
accaaaaaaagggaaagggatgaagaaaatcaagaaatgtcttcatgcaaatctgcaaga
atagaaatgtcttgttctcttttagagcaaacacaacctgctacaccctcactatggaaa
aataaggagcctgtggacaaaaagtcagataacttatttacagatatagatttagaatcc
agtgtgaaaaattctgccagtaaatctcattctgcagaagagctaagatcaaataaaaaa
agagaaatggatgatgtggccatagaagatgaaatactggaacagttattcaaggacaca
aaaccagagttagaaattggtgtgaaagtacaaaaacaagaggaagatgtcaatattagg
aaaaggccaaggatggatatagaaacaaacgacactttcagtgatgaagcagtaccagaa
agtagtgaaatgtctcaagaaaatgagattgggatgaaacgtgaactcaagaaagaatca
ctatggtcaactaaagtagaaatatctaacaatgacaaacttcaggatgaaagtgagatg
cttccaagaaaggtgttattgactgaatttaaatcactggtgattaaaaaccctacttcc
agaaatctatctggcataagtgatgattatggtcaactaaaaaatttcaagaaattcaaa
aaggtcacatatcctggagcagggaaacttccacacaccattggagggtcagatctaata
gctcatcatgcttga
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