Callithrix jacchus (white-tufted-ear marmoset): 100403298
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Entry
100403298 CDS
T03264
Symbol
TMC2
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100403298 (TMC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100403298 (TMC2)
03037 Cilium and associated proteins [BR:
cjc03037
]
100403298 (TMC2)
Transporters [BR:
cjc02000
]
Other transporters
Pores ion channels [TC:
1
]
100403298 (TMC2)
Cilium and associated proteins [BR:
cjc03037
]
Other cilia and associated proteins
Stereociliary proteins
100403298 (TMC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TRAP_beta
Motif
Other DBs
NCBI-GeneID:
100403298
NCBI-ProteinID:
XP_054110968
LinkDB
All DBs
Position
5:8005150..8087810
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AA seq
991 aa
AA seq
DB search
MPPRARCVSLCETPAALLTMSHQVKGLKEEGLLEGFDLRMAPTFRTALHVPQSLLGPLTF
LIVLYAKVPYLECSVLSPTELTSSEAPWTFDFSQSGTFSWAIATRPVHFPAPAGNRLGRR
PSSKQAPKAQGTWGRRGAQRSQKECAGDSPSPGAPQRKQTERRRLREELGKQEPSKAEGT
SEGRRKRDKRSSFKEQTAPSKKEKEILRKEKLKRQKKPRSSSLASSSSGGESLSEEELAR
ILEQVEEKKKLIATMRSKPWPMAKKLTELREAQEFVEKYEGALGKGKGKRLYACKMLMAK
KWVKFKRDFDNFKTQCIPWEMKIKDIESHFGSSVASYFIFLRWMYGVNLVLFGLIFGLVI
IPEVLMGMPYGSIPRKTVPRAEEEKAMDFSVLWDFEGYIKYSALFYGYYNNQRTIGWLRY
RLPMAYFMVGVSVFGYSLMIVIRSMASNTQGSTGEGESDNFTFSFKMFTSWDYLIGNSET
ADNKYASITTSFKESIVDEQESNKEENIHLTRFLRVLANFLITCCLCGSGYLIYFVVKRS
QQFSKMQNVSWYERNEVEIVMSLLGMFCPPLFETIAALENYHPRTGLKWQLGRIFALFLG
NLYTFLLALMDDVHLKLAHEETIKNITHWTLFNYYNSSGWNESVPRPPLHPADVPRGSCW
ETAVGIEFMRLTVSDMLVTYITILLGDFLRACFVRFMNYCWCWDLEAGFVASYAEFDISG
NVLGLIFNQGMIWMGSFYAPGLVGINVLRLLTSMYFQCWAVMSSNVPHERVFKASRSNNF
YMGLLLLVLFLSLLPVAYTIMSLPPSFDCGPFSGKNRMYDVLQETIENDFPTFLGKIFAF
LANPGLIIPAILLMFLAIYYLNSVSKSLSQANAQLRKKIQALHEVEKSHKSVKGKATARD
SGDTLKSSSQNATQLQLTKEETSPPSASQSQAMDKKAQGPGTSNSARGTMLPASGHLPIS
RPPGVRTDSGHPPSQTHLWSASGKSAQRPPH
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaagagcacgctgtgtgagcctgtgcgagaccccagcagcactgctgaccatg
agccaccaggtaaagggcctgaaagaggaagggctgctggaaggattcgacctgcgcatg
gcacctacgttcaggacagcactgcatgttcctcagagcctgctggggcccctcaccttc
ctaattgtcttgtatgccaaggttccatatttggagtgttctgttctgagccccacagag
ctcacaagctcagaagcaccttggactttcgatttctcacagtcagggacattttcctgg
gccattgcaaccagacctgtccattttcctgcccctgcaggtaacaggttgggaaggaga
ccctcgagcaagcaggctcccaaagcccaggggacctggggcaggcgtggagctcagcga
agccagaaggagtgcgcaggggacagcccaagcccgggggctccccagaggaagcaaaca
gagcgcaggagactccgagaagagctggggaaacaggagcccagcaaggcggaggggacc
tctgaggggaggaggaagcgggacaaaaggtcttccttcaaggagcagacagcaccctca
aagaaggaaaaggagattctgaggaaggagaagttgaagcggcagaagaaacccagatca
tcctcgttggcctccagcagctctggtggggagtccctgtctgaggaggaactggcccgg
atcctggagcaggtggaagaaaaaaaaaagctcattgccaccatgcggagcaagccctgg
cccatggcaaagaagctgacagagctcagggaggcccaggaatttgtggagaagtatgaa
ggtgccttgggaaaggggaaaggcaagcgactatatgcctgcaagatgctgatggccaag
aaatgggtcaaatttaagagagactttgataatttcaagactcagtgtatcccctgggaa
atgaagatcaaggacattgaaagtcactttggttcttccgtggcatcatatttcatcttt
ctccgatggatgtatggtgttaacctcgttctttttggtttaatatttggtctagtcata
atcccggaggtactgatgggcatgccctatgggagtattcccagaaagacagtgcctcgg
gctgaagaagaaaaggccatggatttttctgtcctttgggattttgagggctatatcaag
tactctgcgctcttctatggctactacaacaaccagaggaccatcgggtggctgaggtac
cggctgcccatggcttactttatggtgggggtcagcgtgttcggctacagcctgatgatt
gttattcgatcgatggccagcaatacccaaggaagcacaggcgaaggggagagcgacaac
ttcacattcagcttcaagatgttcaccagctgggactacctgatcgggaattcagagacg
gccgacaacaaatatgcctccatcaccaccagcttcaaggaatcaatagtggatgaacaa
gagagtaacaaagaagaaaatatccatctgaccaggtttcttcgtgtcctggccaacttc
ctcatcacctgctgtttgtgtggaagtgggtacctcatttactttgtggtgaagcggtcc
caacaattctccaaaatgcagaatgttagctggtatgaaaggaatgaggtagagatcgtg
atgtccctgcttggaatgttttgtccccctctgtttgaaaccatcgctgccctggagaat
taccacccacgcactggactgaaatggcagctggggcgcatctttgcactcttcctggga
aacctctacacatttctcttggccctgatggatgatgtccacctcaagcttgctcatgaa
gagacaataaagaacatcactcactggactctgtttaactattacaactcttcgggttgg
aacgagagtgtcccccgaccacccttgcaccctgcagatgtgccccggggttcttgctgg
gagacagctgtgggcattgaattcatgagactgacggtgtctgacatgctggtaacgtac
atcaccatcctgcttggggacttcctacgtgcttgttttgtgcggttcatgaactactgc
tggtgctgggacttggaggctggatttgtagcttcatatgctgagtttgatattagtgga
aatgtgctgggtttgatcttcaaccaaggaatgatctggatgggctccttctatgctccg
ggcctggtgggcattaacgtgctgcgcctgctgacctccatgtacttccagtgctgggcg
gtgatgagcagcaacgtgccccatgaacgcgtgttcaaagcctcccgatccaacaacttc
tacatgggcctcctgctgctggtgctcttcctcagcctcctgccggtggcctacaccatc
atgtccctcccaccctcctttgactgcgggccgttcagtgggaaaaacagaatgtatgat
gtcctccaggagaccattgaaaacgatttcccaaccttcctgggcaagatctttgctttc
ctcgccaatccaggcctgatcatcccagccatcctgctgatgttcctggccatttactac
ctgaactcagtttccaaaagcctttcccaagctaatgcccagctgaggaagaaaatccaa
gcgctccatgaagttgagaagagccacaagtctgtcaaaggcaaagccacagccagagat
tcaggggacacactgaaaagcagctcccaaaatgccacccagctccaactcaccaaggaa
gagaccagtcctccctctgccagccaaagccaggccatggacaagaaagcgcagggccct
gggacctccaattctgccagggggaccatgttgcctgcctctggacaccttcctatatct
cggcctcctggagtcagaacggattctggccaccccccatctcagactcatctgtggtca
gcctctgggaagagtgctcagagacctccccactga
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