Callithrix jacchus (white-tufted-ear marmoset): 100403374
Help
Entry
100403374 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: thyroid receptor-interacting protein 11-like
KO
K23368
thyroid receptor-interacting protein 11
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100403374
Membrane trafficking [BR:
cjc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
100403374
Retrieval pathways
100403374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
DUF4140
ATG16
Motif
Other DBs
NCBI-GeneID:
100403374
NCBI-ProteinID:
XP_035132676
LinkDB
All DBs
Position
16:<27675720..27681402
Genome browser
AA seq
1868 aa
AA seq
DB search
CGQVRGSLASLAGQISNFTKFVLPDFIKEIEVIREILRSENKRYKKLCIDLQEKHEASEL
QTKQQSTSYQNQLQQKEVKSHHGEARHTVLQDQMLKLQSAAESVPSGAGGVPATTASSFA
YGISHHPSAFHDDDMDFNDIILSXQEINQLPNEVSRLESGVVYWRDIGHTSTAXGTHSTA
QREINKLQNIKELKQNQSQEIDDHQHEMSVLQNVHHQKLTEISQQHQEELGDYEERIEEL
TNLLQQGGLGVTETNHSKIYEMQKPVQFLQTEKVESPKKIEELEDKIKDINKKLSSAQND
RDILRKEQEQLNVEKRQILEECENLKFECSESQPYGMKQSDTVTEKGRIIAQSASVEEVF
RLQALSDANNEIMRXSSLNQDKSLVEDNLKLKMHIEDLEKDKSLLSQEKEELQMSLLKSN
NEYELLKSAATRDISLDSELYSLRLNWEAKEQELNQSISEKKILTAKIGKLDRQNQDAKM
HMLLIKDHLSKQQNEGDDIISKLKQDLNDEKKEVHQLEGDKMDITKELDVQKETLLQREV
ALDDLHLTKQKLEDKIEDSVHQLNKSQKYNVSIQKENVELKEHIRQNDEELSRLRDELTH
SLNQDSSSDFKDNLIKEKEAEVRNLKQSLSELQQLKVAFDVKMENEKLVSACEDVRHQLE
EYIANRNQLSLEKNTIVETLKMEKGETEAELCQAKKKLLCLLEEANKHEKTVGELPNACH
LITSALQLEHEHLIKLSQKKDIEIAELKKNIGQMDTDHKEIKDMLSSSLEEQKQMTQLXN
KKEIFIENFQEKSSKLQEELGKYSQALRKHEILRQTIWERDRSLGSMKEENNHLQEKLEW
LGEQQSRTVPVADPKTLDSVTELESELSQLNVIKDHLEEETEHYPMITEGQNQSKMQLLQ
SLQEQKDMDELRHQHTQRNATCTQLCLENSEEVKCLQKTIEPIKTQLYEEKQKIQTGNSD
VFQETKVQSLNIKNGSEHDLSKAETEGLVKGIXERELETKLINEKNVALTELIDHLSRDE
VAKLNQIIQQKDLEIQALQARTPSTSYNQVIVHLQQQVQAYXETEQLFTVLNKKTTENTH
LKRKYHKMMDTVAAKEAALIKLQDENQKLSTRFESSGQNLSRIIREKDIETDVLSQKCQT
LLAVLQTSSTGNEVGGVNRNQFVELLQERDELKQRVKRMEEWKQQVMTTVQNMQHESAQL
QEELHQLQAQVLVDSDNNCKLQVDYTGLIQSYEQNETRLKNLRQELAQVQHSTGSICNTK
DLLSGKHGIISPQLSSASLLTPQSAESLRASKSDVLNESSELLQQELEEFRKSLQEKDAT
IRTLQANNQKLSDSIDATSELERKEHEKTDSEIKQLKEKQDVLHKLLKGKDTLIKVKNDQ
LLSSNENFTNKVNENKLLRQEVTTLKERILILEMDTGKVKGEKENIVETSREKETEYQPL
QETNMKFSMMLREKEFXCHSMKEKALAFEELLKEKEQDKTGELNQLVNAVKSMQEKIVVF
QQERDQVMSSLKQKQMENTALQNEVQRLHDNKFQSNQELERLRNHLLESEDSYTHEALAA
EDREAKLTKKVTVLEEKLVLSSNAMENASHQASVQVASLQEQLNVVSKQRDESVLQLSAP
QEQVKQYAVSLAILQMVLQRFQQDEQAMYYSAELEKQKHLRTEWKKKEEHLQRTVLSLQE
HLDEANAALDSASRRTEQIEELRKQNEVRPEMPDDVQEKLMHLVDTSEGKVDKVLMRNLF
TGPFQAPKHQRHEVLRLMGNILGVRREEMEQLFRDSHGGVTRWMTGWLGGGSESVPSTPL
KSNQQSVPHSSFSELFVKLVETESHSSVLPPKLSVHDMKPLDSPGRRTLDTNAPEEFCLF
VCLFVCFK
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
tgtggtcaagtcaggggcagcctggcttccctcgctggccagatttcaaattttacaaag
tttgtattacctgattttataaaggaaattgaagtcattcgtgaaatcttgagatcagag
aataaaaggtataagaaactttgtattgatctacaagagaaacatgaagcatcagagctt
caaacgaaacagcaatctacaagttaccaaaatcaacttcaacaaaaagaggtaaaaagc
caccacggtgaagccagacatactgtgctccaggaccagatgctgaaactgcagtcagct
gctgagtcagtaccttcaggagctggcggtgtaccagcaaccactgcatcttctttcgct
tatgggattagtcatcatccttcagctttccatgatgacgacatggactttaatgatata
attttgtcctgacaagaaataaaccaactcccaaatgaagtttcaagacttgagtctgga
gttgtctattggagggatattggtcacacttcaacagcatgaggaacacatagcactgct
caaagagaaataaacaaactacaaaatattaaggaactgaaacagaaccaaagtcaggaa
atagatgaccatcaacatgaaatgtcagtactgcagaatgtgcaccaccagaaattgaca
gaaataagtcaacagcatcaagaagaattaggcgactatgaagaacgaattgaagaactc
acaaatctgttacaacaaggtggccttggagttacagaaaccaatcactccaaaatctat
gagatgcaaaagcctgttcaatttctacaaacagaaaaagtggagtctcccaaaaaaatt
gaagaacttgaggataaaataaaagatataaataaaaaattatcttccgcacaaaatgat
agagatattttgaggaaagaacaagaacagctaaatgtggaaaagagacaaatattagaa
gaatgtgaaaacttgaaattcgagtgtagtgaatcgcagccctatggtatgaagcaaagt
gatactgtgacagaaaagggaagaattattgcacagagtgcatcagtggaagaagtgttc
agactacaagcactgtctgatgccaacaatgaaataatgagatagagtagtttaaaccag
gataagagtcttgttgaagacaatctgaaacttaaaatgcatattgaagacctagaaaaa
gataaatcattactgagtcaagaaaaagaagaacttcagatgtcacttttaaaatcaaac
aatgaatatgaactacttaaaagtgcagctacaagagacataagtttggattcagaatta
tatagtttaagacttaattgggaagcaaaggaacaagaactcaatcagagtattagtgaa
aagaaaatcctgacagctaagataggaaaattggacagacagaatcaagatgctaaaatg
cacatgcttctgataaaagatcatctatcaaaacaacaaaatgaaggagatgacatcatc
agtaaactgaaacaagatctaaatgatgaaaaaaaggaagtccatcaacttgaaggtgat
aaaatggacattactaaagagttagatgtacaaaaagaaacactgcttcaacgtgaagtg
gccctagatgatttacatttaaccaagcagaaacttgaggacaaaatagaagattcagta
catcagctaaataaatcgcaaaaatataatgtaagcatccagaaggagaatgtggaactt
aaagagcatattagacaaaatgatgaggagctttctagactcagggatgagttaactcac
tctttaaatcaagactctagtagtgattttaaggacaacttaattaaagaaaaagaagcc
gaagttagaaacttgaagcaaagtctttcagaattacagcagctcaaagttgcttttgat
gtcaaaatggaaaatgaaaagttagtttcagcatgtgaagatgtgaggcatcagctggaa
gaatatattgctaatagaaatcagctttctcttgaaaaaaacaccattgtggagactcta
aaaatggaaaaaggagagacagaagcagaattgtgtcaggctaagaagaagctattgtgt
ctattggaagaagcaaacaagcatgagaaaaccgttggagaattgccaaatgcatgtcac
ttgattacctctgccttgcagctggaacatgagcatttaattaaactcagtcaaaagaaa
gacattgaaatagcagaactcaaaaagaatattggacaaatggatactgatcataaagaa
attaaggacatgttgtcatctagtctagaagagcagaagcaaatgacacaactttgaaac
aagaaagaaatttttattgaaaactttcaagaaaaaagttcaaagttgcaggaggaattg
ggtaaatactctcaggccttaagaaaacatgaaattttaagacagaccatatgggaaagg
gacagaagtcttggatccatgaaagaagaaaataatcatctccaagaaaaactagaatgg
cttggggaacagcagagtcgaactgtacctgtggctgatccaaaaacccttgatagtgtt
actgaactagaatctgagttatctcaactgaacgtgatcaaggatcatcttgaagaggaa
acagaacactatccaatgataactgaaggtcaaaaccagagtaagatgcaactacttcag
tctttacaagagcagaaggacatggatgagttgagacaccagcacacgcaaaggaacgcc
acgtgcacccagctctgtttagagaacagtgaggaagttaagtgtttgcaaaaaacaatt
gaaccaatcaaaacccagctttatgaagaaaagcagaagattcaaacaggtaactctgat
gtttttcaagaaaccaaagttcagagccttaatataaaaaacggaagtgagcatgattta
tctaaagctgaaacggaaggattagtgaaaggaatcnnagagcgagaactggagactaaa
cttataaatgaaaagaatgtagctttaactgaactgatcgatcacttgtccagagatgaa
gttgctaaactaaatcagatcattcagcagaaagatttggagatacaagctcttcaggct
agaacgccttcaacttcctataatcaagttattgttcaccttcaacagcaagtgcaggcc
tatngagaaacagaacagctattcactgttctgaataagaagactacggaaaatacccat
ctaaaaagaaagtatcacaaaatgatggatacagttgctgccaaagaagcagctctcatc
aaactgcaagatgaaaatcaaaaattgtccactagatttgaaagtagtggccagaattta
tcacgtatcattcgagagaaagacatcgaaacagatgtactaagtcaaaaatgtcagacc
ttattggcagttttacaaacatccagcactggtaatgaggttggaggtgttaatcgtaat
caatttgtggagctcttacaggaacgtgacgagttaaaacagcgagtaaagagaatggaa
gagtggaaacagcaggtgatgaccacagtacaaaatatgcaacatgagtccgcccagctt
caggaagaacttcaccaacttcaggcacaagttttggttgacagtgataataactgtaaa
ttacaagtggactatactggcctgatccaaagttatgagcagaacgaaaccagactcaaa
aatttgaggcaggaattagcacaagttcagcacagcactgggagtatttgcaataccaag
gatcttctttcaggaaaacatggtattatttcaccccagctgtcttcagcatcattgctg
actccccagtcagcagagtctcttagagcaagtaagtctgatgtattgaatgaatcttct
gaattgctacagcaagagctagaagagttcagaaaatcactacaggaaaaagatgcaaca
attagaacgctccaggcaaataatcagaaattgtctgattcaattgatgccacctcagag
ctagaaagaaaagaacacgaaaaaactgattcagaaattaagcagctaaaggagaaacaa
gatgttttgcacaagttacttaagggaaaagacaccttaatcaaagtcaaaaatgatcaa
ttactttcttccaatgaaaatttcactaacaaagtaaatgaaaacaaacttttgagacag
gaagtaacaaccctgaaggagagaatattaattctagagatggacactggcaaagtaaaa
ggagaaaaggaaaacatagtagaaacatccagagaaaaggaaacagaatatcaaccattg
caagagactaacatgaagttttctatgatgctgcgagaaaaagagtttngatgccattca
atgaaggagaaggctcttgcttttgaagagctattgaaagaaaaagaacaggacaagact
ggggagttaaatcagcttgtaaatgcagttaaatcaatgcaggagaagatagttgtgttt
caacaggagagagaccaagtcatgtcgtccctgaaacaaaagcaaatggaaaacactgcc
ctacagaatgaggttcaacgtttacatgacaacaaatttcagtcaaaccaggagctagag
agattgcgtaatcatcttctagaatcagaagattcttatacccatgaggctttggccgca
gaagatagagaggctaaactaacaaagaaagtcacagtattggaggaaaagctagtttta
tcctctaatgcaatggaaaatgcaagccatcaagccagtgtgcaggtagcatcattgcaa
gaacaactgaatgtagtctccaagcaaagggatgaaagtgtgctgcagctttctgcccct
caggaacaagtaaagcagtatgctgtgtcactggccatcctgcagatggtactacagcgt
ttccaacaagacgaacaagctatgtattattctgctgagctagaaaagcaaaaacatctt
agaactgaatggaagaaaaaggaggaacatctgcaaagaacagtgttatcattacaggaa
catttggatgaagcaaatgctgcattggattcagcatcaagacgtacagaacaaattgaa
gaacttagaaaacaaaacgaggtccgaccagaaatgccggatgatgtacaagagaaattg
atgcacttggtagacacctcagaaggaaaagtggacaaagtcctaatgagaaacctgttc
actggtcctttccaggcaccgaaacatcagcgtcatgaagtgttacggttgatggggaac
attctgggtgtgagaagggaggagatggagcagttgtttcgtgacagtcatggaggtgtt
accaggtggatgactgggtggctcggaggaggatcagaaagtgttcccagtacacctttg
aaatcaaatcagcaatctgtgcctcatagttctttttcagaacttttcgttaaattagta
gaaacagaatctcattcatctgttctaccaccaaagctttctgttcatgatatgaaacca
ctagattcaccgggaaggagaacactagatacaaatgcaccagaagagttttgtttgttt
gtttgtttgtttgtttgttttaaatga
DBGET
integrated database retrieval system
