Callithrix jacchus (white-tufted-ear marmoset): 100403375
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Entry
100403375 CDS
T03264
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100403375 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100403375 (RAD54B)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100403375 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
100403375
NCBI-ProteinID:
XP_008981154
Ensembl:
ENSCJAG00000000080
UniProt:
F7EJ02
LinkDB
All DBs
Position
16:31035047..31140718
Genome browser
AA seq
910 aa
AA seq
DB search
MRRSAAPSQLQGNSFKKPKFIPPGRSNPGLNEEITKLNPDIKLFEGAANNNTFFPSQNDP
RICNLNILPTEESTREINCRDNCSGKYCLEAPTMATLDPPHTVHSAPKELPVSKDQEEKS
DSLVKYFNVVWCKPSKKKHKKWEGDAVLIVRGRSFTLKDFEGKDIGRGIGYKFKELEKIE
EGQTLMICGKEIEVMGVISPDDFSSGRCFQLGGGSTATSHSSLAARKCFSNPFKSVCKPS
SKENRQNDFQNCKPRHDPYMPNSLVMPRPDKNHQRVFNKNCLPLVDVVIDPYLVYHLRPH
QKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTL
IVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSVFYSVLVISYEMLLRSLDQ
IKDIKFDILICDEGHRLKNSAIKTTTALISLSCDKRIILTGTPIQNDLQEFFALIDFVNP
GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL
PPKIENVVFCRPVALQIELYRKLLNSQVVRFCLQGLLENSPHLICIGALKKLCNHPCLLF
NSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRP
TERVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLS
SKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIY
QRQISKQGLCGAVVDLTKTSEHIQFSLEELKNLFTLHESSSCVTHDLLDCECTGEVHTGD
SLEKFIVSGDCQLDPHHQKSNSPKLLSMSQLKQWKHFSGDHSNLTDPFLERITENVSFIF
QNITTQATVT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgcagcaccaagtcaattgcaggggaattccttcaaaaaaccaaaattt
atacctccaggaagaagtaatccaggtctgaatgaagagattacaaaactgaatccagat
ataaaattatttgagggtgctgcaaataataacacctttttcccgtcacaaaatgatcct
agaatatgcaatttaaatattctgcctactgaagaaagtactagagaaattaattgcaga
gataattgcagtggaaaatattgtttggaagcacctacaatggcaacattagatccacct
catacagttcattcagctcctaaagaactaccagtgtccaaggaccaagaggaaaaatct
gatagcctagttaaatatttcaatgttgtttggtgtaagccttcaaagaaaaaacataaa
aagtgggaaggtgatgctgttcttattgtaagaggaaggtcatttacattaaaggatttc
gaaggcaaagacattggaagaggcattggttataaattcaaagagcttgaaaagattgaa
gagggccaaacactgatgatttgtggaaaagaaatagaagtcatgggtgtcatctctcca
gatgacttcagcagtggcaggtgttttcagcttggaggaggaagtactgctacctctcat
tcttctctggctgccaggaaatgtttctctaaccctttcaaaagcgtttgtaaaccaagt
tcaaaggaaaatagacagaatgatttccaaaattgcaaaccacgccatgacccgtatatg
ccaaattcccttgttatgccacgaccagataagaatcaccagcgggtattcaataagaac
tgtttacctcttgtggatgtagtgattgatccttaccttgtttatcatcttcgaccacat
cagaaagaaggaatcatattcctttatgaatgtgtgatgggaatgagaatgaatggcaga
tgtggagctattcttgctgatgaaatgggtttagggaaaacactgcaatgtatttcgctc
atctggaccctgcagtgtcagggaccctatggaggcaagccagtaataaagaagacacta
attgtcacacctggaagcttggtgaataattggaagaaagaatttcagaaatggctagga
agtgaaaggattaagatatttactgttgatcaggaccacaaagtcgaagaattcatcaaa
tctgtattttattctgttcttgttatcagttatgaaatgttacttcgttccctggatcaa
attaaggatataaaatttgatattctaatctgtgatgagggacatcggttgaagaacagt
gcgattaagacaactacagcccttattagcctttcttgtgataaaagaataattctaact
ggtactccaattcagaatgatctgcaagaattttttgcattaattgattttgtaaatcca
ggaatattaggctctttgtcatcttataggaaaatatatgaagaacccatcattttatca
agagaaccttctgcttctgaggaagaaaaagagttgggagagagaagagcagctgaactt
acttgccttactggactctttatccttagaagaacccaagaaattataaataaatatctt
ccacctaaaatagagaatgtagtcttttgccgaccagtagcactccagattgagctgtat
cgaaagctgctaaattctcaggttgtcaggttctgtcttcaaggattgttggaaaatagt
cctcatctaatttgtataggagctcttaaaaaactgtgcaatcatccctgccttttgttc
aactctataaaggaaaaagaatgtagctcaacttgtgataaaaatgaagaaaagagtcta
tacaaaggcttgctaagtgtctttcctgctgactacaaccctctcctatttactgaaaag
gagtcaggaaaactacaggtgctgtcaaagctcttagctgttatccatgaacttcgacct
actgaaagggtggtgttggtatccaactatacacaaaccttgaacattttacaagaagta
tgtaagcgtcatggatatgcttatacaagacttgatgggcaaacaccaatctctcaaagg
cagcagattgttgatggctttaatagtcaacactcttctgtttttatttttttgttaagt
tcaaaagctggtggtgtaggacttaaccttattggaggatctcacttaattctttatgac
attgattggaatccagccactgatattcaggcaatgtccagagtatggagagatggtcag
aagcatcctgtacatatttacagactcctaaccacaggtacaatagaagaaaagatctat
caaaggcagatcagtaagcaaggtctttgtggggcagttgtcgatctcactaagacatcg
gaacatattcagttttcactagaagaacttaaaaatttgttcaccttgcatgaaagttca
tcttgtgttactcatgacctgcttgactgtgagtgtacaggagaagttcatacaggtgat
tcgttggaaaaattcattgtctctggagattgtcagcttgatccacatcaccagaaatct
aactccccgaaacttctttctatgtcccagctgaagcaatggaaacatttttctggagac
cattcaaatcttacagatccttttcttgaacgaataacagaaaatgtgtcattcattttt
cagaatataaccactcaagctactgtcacataa
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