Callithrix jacchus (white-tufted-ear marmoset): 100403500
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Entry
100403500 CDS
T03264
Symbol
STXBP5L
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100403500 (STXBP5L)
Membrane trafficking [BR:
cjc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100403500 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
100403500 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Lgl_C
RAB3GAP2_N
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_EML
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
100403500
NCBI-ProteinID:
XP_035129974
Ensembl:
ENSCJAG00000008529
LinkDB
All DBs
Position
15:complement(75600971..76056402)
Genome browser
AA seq
1234 aa
AA seq
DB search
MMGEEPGRWLQSKYRLPNIVFLKIKYSELNVSKKESPPLRERRSLVCKMKKFNFRKVLDG
LTASSPGSSSSSGSNSGGGAGSGSVHPAGTAGVLREEIQETLTSEYFQICKTVRHGFPHQ
PTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFLINEGALVSASSD
DTLHLWNLRQKKPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTHIVNIESFILSGY
VIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKSKRAELRVYYDEA
IHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTIPHGKSQKEGRKSESCKPILKVE
YKTCKNSEPFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEFLTLCETPYPNEF
QEPYAVVVLLEKDLIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFADCPPDLILVLYSI
GVKHKKQGYSNKEWPISGGAWNLGAQTYPEIIITGHADGSIKFWDASAITLQMLYKLKTS
KVFEKQKLGEGKQTYEIVEEDPFAIQMIYWCPESRIFCVSGVSAYVIIYRFSRYEITTEI
VSLEVRLQYDVEDIITPEPETSPPFPDLSAQLPSSRSLSGSTNTVASEGVTKDSIPCLNV
KTRPVRMPPGYQAELVIQLVWVDGEPPQQITSLAVSSAYGIVAFGNCNGLAVVDFIQKTV
LLSMGTIDLYRSSDLYQRQPRSPRKNKQFIADNFCMRGLSNFYPDLTKRIRTSYQSLTEL
SDSPVPLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVSKVNRWGPGRPPFRKAQ
SAACMEVSLPVTTEENRENSYNRSRSSSISSIDKDSKEAITALYFMESFARKNDSTISPC
LFVGTSLGMVLIISLNLPLADEQRFTEPIVVLPSGTFLSLKGAVLTFSCMDRTGGLMQPP
YEVWRDPNNIDENEKSWRRKVVMNSSSASQEIGDHQYTIICSEKQAKVFSLPSQTCLYVH
NITETSFILQANVVVMCNSACLACFCANGHIMIMSLPSLRPMLDVNYLPLTDMRIARTFC
FTNEGQALYLVSPTEIQRLTYSQEMCDNLQDMLGDLFTPIETPEAQNRGFLKGLFGGSGQ
TFDREELFGEASAGKASRSLAQHIPGPGSIEGMKGAAGGVMGELTRARIALDERGQRLGE
LEEKTAGMMTSAEAFSKHAHELMLKYKDKKWYQF
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaagagccaggaaggtggttgcagagtaaataccggctccccaacatcgtt
tttctgaaaataaaatattctgagctgaacgtttcgaagaaggaaagcccgcccttaaga
gagagacggagtcttgtgtgtaaaatgaagaagtttaatttccgaaaagttttggatggc
ttaactgcctcctcccctggcagcagtagcagcagtggcagtaacagtggtggtggggct
ggaagtggttccgtacatcctgcagggactgcaggggttctcagagaggaaattcaggaa
accctgacttcggagtatttccagatttgcaagacagttcggcatggttttcctcatcag
cccacagcattagcctttgatccagttcagaaaatcttggctattgggacgagaacaggt
gctatacgaatacttgggagacctggtgttgattgctattgccaacatgaaagtggtgca
gctgtcctacagctccaatttttgatcaatgagggtgccttggtcagtgcaagttcagat
gatacacttcatttgtggaaccttagacaaaaaaagccagctattctccattctcttaaa
tttaaccgagaaagaattacttactgtcatctacctttccagagtaaatggctttatgtt
ggaacagaaagaggaaatacacacattgtaaatattgaatctttcattctttctggatat
gttatcatgtggaacaaggcaattgaactatccaccaagactcatccaggtccagttgta
catttaagtgatagcccaagagatgaagggaaactgctaataggttatgaaaatggtact
gtagtattctgggacttgaaatctaaaagagcagaactgagagtttattatgatgaggct
attcattcaattgattggcatcatgagggcaaacagttcatgtgcagccattcagatggt
agtttgactttatggaacctgaaaagcccaagtcgccctttccagaccacaattccacat
ggaaaaagtcaaaaagaaggaagaaaatctgaatcttgtaaaccaattcttaaagtagaa
tacaagacctgcaaaaacagcgaaccattcataatattctctggtgggctgtcctatgac
aaagcttgtagaagaccaagtttaaccatcatgcatggaaaagcaattacagtacttgaa
atggatcatcctattgttgaatttctaactttatgtgaaacaccctatccaaatgaattt
caagaaccttatgctgtcgtagtacttctggagaaagatcttattgtagttgatctgaca
caaagcaattttccaatctttgaaaatccatatcccatggacattcatgaatcaccagtt
acatgcacagcatactttgctgattgtcctccggatttgattctagtactgtattctata
ggagtcaagcataaaaaacaaggctacagtaataaggagtggccaattagtggaggagct
tggaaccttggagcacaaacatatccagaaattattattactggtcatgcagatggatca
ataaaattttgggatgcttctgcaataactctgcagatgctgtacaagctaaaaacttca
aaagtgtttgaaaaacagaagttaggagaaggaaaacaaacatatgaaattgtagaggaa
gatccatttgccattcagatgatttactggtgtccagagagcagaatattttgtgtatca
ggagtctctgcatatgtcataatttacagatttagcagatatgaaattacaacagaaata
gtgtcattagaggtacgacttcagtatgatgttgaagatattattacccccgaaccagaa
acaagtcctccatttccagatctgtcagcccagcttccttcttcaaggagtctttccggg
agcactaacactgttgctagtgaaggagtaacaaaggacagtatcccatgcctcaatgtt
aagacacggccagtgcggatgcctccaggatatcaagcagaacttgttattcaattggta
tgggtagatggcgaacctccgcaacagattactagtcttgctgtaagctcagcatatgga
atagttgcatttggaaactgcaatgggttggccgtggtggattttatacagaagacagta
ctgttaagcatggggaccattgacctatatagatcaagtgacctataccagcggcaacca
cggtctcctcgaaaaaacaaacagttcattgcagacaacttttgcatgcgtggcctgtct
aacttttatcctgatttaacgaaacggatccgtacttcctatcagagtttaactgaacta
agtgacagtccagttcccctagaacttgagcgctgcaagtctcctacctcagaccatgta
aatggacattgcacaagtccaacttcccagagttgcagttctggaaaacgtctttctagt
gccgatgtttcaaaagtaaatcgctggggtcctggaagaccaccatttcgaaaggcccag
tcagcagcttgcatggaggtttctttaccagttacaacagaagaaaaccgagaaaattcc
tataatcgttctagaagctctagcatctccagtattgacaaagattctaaagaagcaatt
acagcactatacttcatggaatcatttgcacggaaaaatgactctaccatctctccttgt
ctgtttgttggaaccagtttgggaatggtgttaattatctccctcaatctaccattagca
gatgaacaaaggtttacagagccgattgtggtattgccaagtggtacattcctctcattg
aaaggagctgtgctaacattctcctgtatggaccgaactggcggattaatgcaacctcca
tatgaagtttggagggatccaaacaacatagatgaaaatgaaaaatcttggagaaggaaa
gtggtaatgaactcatcgtctgcatcccaagaaataggagatcatcagtatacaataatc
tgctcagaaaaacaagccaaagtcttctcactgccttctcagacttgtctttatgttcat
aacatcacggagacatcttttatactgcaagcaaatgtggtggtcatgtgtaacagtgcc
tgcttggcctgcttttgtgctaatggacatatcatgataatgagcctacctagtcttcgc
ccaatgttggatgttaattatttgccactgacagatatgaggatagcacgaacattttgt
tttaccaatgaaggacaggcattatacctcgtctctcctactgaaattcagcggttaaca
tacagccaagaaatgtgtgataatctacaggacatgctaggagatttgtttactcccata
gagacaccagaagctcaaaacagaggctttctcaagggactgtttgggggaagtggacaa
acatttgacagagaagagctctttggggaagcttcagcaggaaaagcatcccgcagcctt
gcgcagcacattcctggaccaggtagtatagaaggaatgaaaggcgctgctggaggggtg
atgggagagctgacccgtgcacggattgcacttgatgaaagaggacagaggctaggagag
ctggaagagaaaactgcaggcatgatgaccagtgcagaagcattttccaaacatgcacat
gagttaatgctgaaatacaaggataagaaatggtaccaattctaa
DBGET
integrated database retrieval system
