Callithrix jacchus (white-tufted-ear marmoset): 100403501
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Entry
100403501 CDS
T03264
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04080
Neuroactive ligand-receptor interaction
cjc04082
Neuroactive ligand signaling
cjc04723
Retrograde endocannabinoid signaling
cjc04727
GABAergic synapse
cjc04742
Taste transduction
cjc05032
Morphine addiction
cjc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100403501 (GABRA1)
04082 Neuroactive ligand signaling
100403501 (GABRA1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100403501 (GABRA1)
04723 Retrograde endocannabinoid signaling
100403501 (GABRA1)
09157 Sensory system
04742 Taste transduction
100403501 (GABRA1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
100403501 (GABRA1)
05033 Nicotine addiction
100403501 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100403501 (GABRA1)
Ion channels [BR:
cjc04040
]
Ligand-gated channels
GABA-A
100403501 (GABRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Atrophin-1
Rrn6_K-rich
RSB_motif
Motif
Other DBs
NCBI-GeneID:
100403501
NCBI-ProteinID:
XP_002744176
Ensembl:
ENSCJAG00000015200
UniProt:
F7GM19
A0A8I4A0G6
LinkDB
All DBs
Position
2:22804443..22862007
Genome browser
AA seq
513 aa
AA seq
DB search
MGVERDREREREREREREREREREREREREREEGERSSERRSEQDGNLIPQQLLQPAMRK
SPGLSDSLWAWILLLSTLTGKSYGQQSLQDELKDNTTVFTRILDRLLDGYDNRLRPGLGE
RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKIWT
PDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLK
FGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTH
FHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNS
LPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLIK
KNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDRLS
RIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagagagagacagagagagagagagagagagagagagagagagagagagagag
agagagagagagagagagagagagagagagagagaagagggagagcgatcaagcgagcga
cggagcgagcaggacgggaacctgatcccacagcagctgctccagcccgcaatgaggaaa
agtccaggtctgtctgactctctttgggcctggatcctccttctgagcacattgactgga
aaaagctatggccagcagtcattacaagatgaacttaaagacaataccactgtcttcacc
aggattttggacagactcctagatggttatgacaatcgcctgagaccaggattgggagag
cgtgtaactgaagtgaagactgatatcttcgttaccagtttcggacccgtttcagaccat
gatatggaatatacaatagatgtatttttccgtcaaagctggaaggatgaaaggttaaaa
tttaaaggacccatgacagtcctccggttaaataacctaatggcaagtaaaatctggact
ccggacacgttttttcacaatggaaagaagtcagtggcccacaacatgaccatgcccaat
aaactcctgcggatcaccgaggatggcaccttgctgtacaccatgaggctgacagtaaga
gctgaatgtccaatgcatttggaggactttcctatggatgcccatgcttgcccactaaaa
tttggaagctatgcttatacaagagcagaagttgtttatgaatggaccagagagccagca
cgctcagtagttgtagcagaagatggatcacgtctaaaccagtatgatcttcttggacaa
acagtagactctggaattgtccagtcaagcacaggagaatatgtcgttatgaccactcat
tttcacctgaagagaaagattggctactttgttattcaaacatacctgccatgcataatg
acagtgattctctcacaagtctcattctggctgaacagagagtctgtaccagcaagaact
gtctttggagtaacaactgtgctcaccatgacaacgttgagtatcagcgccagaaactcc
ctccctaaggtggcttatgcaacagctatggattggtttattgccgtatgctatgccttt
gtgttctcagctctgatcgagtttgccacagtaaactatttcaccaagagaggttatgca
tgggatggcaaaagtgtggttccagaaaagccaaagaaagtaaaggatcctcttattaag
aaaaacaacacttatgctccaacagcaaccagctacactcctaatttggccaggggtgac
ccaggcttagccaccattgctaaaagtgcaaccatagaacccaaagaggtcaagcccgaa
acaaaaccaccagaacccaagaaaacctttaacagtgtcagcaaaattgatcgactgtca
agaatagccttcccgctgctatttggaatctttaacttagtctactgggctacgtattta
aacagagagcctcagcttaaagcccctacaccacatcaatag
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