Callithrix jacchus (white-tufted-ear marmoset): 100403517
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Entry
100403517 CDS
T03264
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100403517 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100403517 (NVL)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100403517 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
TIP49
AAA_2
AAA_33
AAA_28
nSTAND3
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_18
AAA_17
ABC_tran
NACHT
Zeta_toxin
nSTAND_NTPase5
ATPase
IstB_IS21
AAA_3
TsaE
Rad17
Vps4_C
Parvo_NS1
Sigma54_activ_2
DUF3540
Motif
Other DBs
NCBI-GeneID:
100403517
NCBI-ProteinID:
XP_002760518
Ensembl:
ENSCJAG00000008031
UniProt:
F7IQF2
LinkDB
All DBs
Position
19:845639..943723
Genome browser
AA seq
856 aa
AA seq
DB search
MKPRPAGFVDNKLKQRVIQYLTSNKCGKYVDTGVLASDLQRMYSIDYGRRKRNAFRIQVE
KVFSIISSEKELKNLTELEDEHLAKRARHGEEDNEYPESYSDEDSSVEDYPDPQSANHMN
SSLLSLYRKGNPDSVSNTPEMEQRETSSSTPRLSSKTGSIPLKTHAKDSEGGWFIDKTPS
GKKDSFFLELSDEKSNPKKPITEIQDSKESSLLESDVKRKGRLKIKRSKRKKEDLQEADG
EIEALLQKKAKAGGLEFRISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRG
VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI
IFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVASTARVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCRE
AAMCAVNRVLMKLQEQQKKDPEMDDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDP
LSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP
VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQIFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFI
MAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIA
GDLRCDCYTGADLSALVREASVCALRQEMARQKSGNEKGELKISHKHFEEAFKKVRSSVS
KKDQVMYERLQESLNQ
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccagacctgcagggttcgtggataataaactcaagcagcgagtcatccagtac
cttaccagtaacaaatgtggcaaatatgtggacactggagtcttagcatctgatttacaa
agaatgtacagtatagactatggtcgaagaaaaagaaatgcgtttaggattcaggtagaa
aaagtatttagcataattagtagtgagaaggaacttaagaatttaacagaattagaagat
gaacatttggcaaaaagagcaagacatggtgaagaggataatgagtatcctgaaagctat
tctgatgaggattcaagtgtggaagactacccagatccacagtcagcaaatcacatgaac
agttccctgctgtctttatatcggaaaggaaatcctgattctgtttcaaatactcctgag
atggagcaaagagaaacctcatcttcaacaccacggttaagttccaaaacaggctccatt
cccttgaagactcatgccaaagattcagagggaggatggtttattgacaaaaccccaagt
ggaaagaaagacagttttttcttggaactatcagatgagaaaagtaatcctaagaagcca
ataactgagatacaggattcaaaagagtcttctcttttggagagtgatgttaaacggaaa
ggccggctaaagattaaaagaagcaaaaggaagaaagaagatcttcaggaagcagatgga
gagatcgaagctctcctgcaaaagaaagctaaagccggggggttagaattccggatctcc
aacgtgaagtttgaagatgtgggaggcaatgatatgacattaaaagaggtctgcaagatg
ctcattcacatgcgtcacccagaggtgtaccaccacctgggcgtcgtgccccctcgtgga
gttctcctccatgggccaccaggctgtggaaagacattacttgcacatgcaattgctggg
gaacttgacctgccaattttgaaagtggctgccccagagattgtgtctggagtatccggg
gagtctgagcagaagctgagagaactattcgagcaagctgtgtcaaatgcaccatgtatc
attttcattgatgaaattgatgctattacacccaaaagagaagttgcttcaaaagatatg
gaacgaagaattgtagcccaactcctaacctgcatggatgatctgaataatgtggcttct
acagcccgggtcctagttattggagctactaatcgaccagactcattagaccctgctttg
agacgtgctggaaggtttgaccgagaaatatgcctaggtatcccagatgaagcatccagg
gaaagaatacttcaaacattgtgcagaaaactgaggcttcctcaggcttttgacttctgt
cacttagcacacctaactccaggctttgttggtgctgatctgatggcactgtgccgagag
gcagcaatgtgtgcagtcaatagagtcttaatgaagctacaggaacagcagaagaaagat
ccggaaatggacgatttgccatctaaaggagtccaggaggaaaggctgggaactgagccc
acttctgaaacacaggatgaattacaaaggctgctggggttgctaagagaccaagatccc
ctctcagaggagcagatgcaaggactgtgcattgaactgaatgatttcattgttgctcta
tcctcagtccaaccctctgccaaaagggaaggctttgtcactgtccctaatgtgacatgg
gcagatattggtgccctggaagacattagagaggagctcaccatggcaatattggcacca
gtacgcaacccagaccagttcaaagctcttggattggtgactccggctggggtcctcctt
gctggtcctcctggctgtgggaagactctgctggcgaaggctgttgcaaatgagtctgga
ctaaattttatatctgtcaagggccccgaattattaaacatgtacgttggtgagagtgaa
cgtgctgtgcgacaaatttttcagcgagccaagaactcagcaccctgtgtgatattcttt
gatgaagtggatgctttatgtcctcgaagatcagaccgagagacaggggcaagtgtccga
gtggtgaatcagctacttacagagatggatggtctggaaacacgccagcaggtgtttatt
atggcagccactaacaggccagatataattgatcctgcaatcctgcgcccaggccgtctg
gacaaaacactgtttgtgggtttaccaccccccgcagatcgccttgccatcttaaaaact
atcacaaaaaatggtaccaaaccaccactggatgcagatgtaaatttggaagcaattgct
ggtgaccttcgctgtgattgctatacgggtgcagatctctctgctttggtacgagaagct
tctgtctgtgccctgagacaggaaatggcaagacagaagagtggaaatgaaaaaggtgaa
ctcaagattagtcataagcactttgaagaagctttcaagaaagtaagatcatctgtatca
aaaaaggatcaagtcatgtatgaacgtttgcaggagtccctcaaccagtga
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