Callithrix jacchus (white-tufted-ear marmoset): 100403606
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Entry
100403606 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: transcription intermediary factor 1-beta-like
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cjc01001
]
100403606
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100403606
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100403606
Protein kinases [BR:
cjc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100403606
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100403606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
PHD_2
PHD-1st_NSD
YaaC
Motif
Other DBs
NCBI-GeneID:
100403606
NCBI-ProteinID:
XP_035139113
LinkDB
All DBs
Position
1:complement(103645841..103648522)
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AA seq
834 aa
AA seq
DB search
MAASAAAAASAAAASAASGSPGPGEGSAGSEKRSTASSAAASASAXAAASSPAGGGAEAL
ELLEHCGLCRERLRPEREPRLLPCLHSACSACLGPAAPASANSSGDGGAAGDGAVVDCPV
CKQQCFSKDIVENYFMCDSGSKTATDAQDENQCCTSCEDNAPATSYCVECSEPLCETCVE
AHQRVKYTKDHTVRSTGPAKSQDGERTVYCNVHKHEPLVLFCESCDTLTCRDCXLNAHKD
HQYQFLDDAVKNQRKLLALLVKRLGDKHVTLQKSTKEVRSSIRQVSDVEKHVQXDVKMAI
LQIMKELNKRGRVLVNDAQKMTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNT
ALLLSKKLIYFQLHWALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAECPGTNSTG
PAPMAPPRAPGPLSKQGSGGSQPVVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGL
MCKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAVDAGQPGTVPAGT
PGAPPLAGMAIVKKEETEAAIGAPPAATEGPETXPVLLALPEGPGTEGPHLASPSGSTSS
GLEVVAPGGTSAPGGGPGTLDDSATICRVCQKPGDLVMCNQCKFCFHLDCHLPALQDVPG
EEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPVSQRKCERVLLALFCHEPCRPLN
QLATDSTFSLDQPGGTLDLTLIHARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKAD
VQSIIGLQRFFKTRMKEAFSDTKFSAVLVEPPPMSLPGASLSSQELSGGPGDGP
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggctgcggcctcagcagcggcggcctcggccgcctctggcagc
ccgggtccgggtgagggctccgctggcagcgaaaagcgcagcaccgcctcttcggccgca
gcctcggcgtcggcctaggccgcggcgtcgtcgcccgcggggggcggcgccgaggcgctg
gagctgttggagcactgcggcctgtgtagagagcgcctgcgacccgagagggagccccgc
ttgctgccttgtttgcactcggcctgtagtgcctgcttaggccccgcggcgcccgcttcc
gccaacagttcgggggacggcggggcggcgggagacggcgcagtggtggactgtcctgtg
tgcaagcaacagtgcttctccaaagacatcgtggagaattatttcatgtgtgatagtggc
agcaagactgccaccgacgcccaggatgagaaccagtgctgcactagctgtgaggataat
gccccagccaccagctactgtgtggagtgctcagagcctctgtgtgagacctgtgtagag
gcacaccagcgggtcaagtacaccaaggatcacactgtgcgctctactgggccagccaag
tctcaggatggtgaacgtaccgtctactgcaacgtacacaagcatgaaccccttgtgctt
ttttgtgagagctgtgatactctcacctgccgagactgcnagctcaatgcccacaaggac
caccagtaccagttcttagacgatgcagtgaagaaccagcgtaagctcctggccttactg
gtgaagcgccttggggacaaacatgtaacattgcagaagagcaccaaggaggttcgcagc
tcgatccgccaggtgtctgacgtagagaagcatgtgcagntggatgtcaagatggccatc
ctgcagatcatgaaggagctgaataagcggggccgtgtgctggtcaacgatgcccagaag
atgactgaggggcagcaggagcgcctggaacggcagcactggaccatgaccaagatccag
aagcaccaggagcacatcctgcgctttgcttcttgggctctggagagtgacaacaataca
gccctcctgctttctaagaagttgatctatttccagctgcactgggccctcaagatgatt
gtggatcctgtggagccacatggcgagatgaagtttcagtgggacctcaatgcctggacc
aagagtgccgaggcctttggcaagattgtggcagagtgtcctggcactaactcgacaggc
cctgcacccatggctcctccaagagccccagggccactgagcaagcagggctctggcggc
agccagcctgtggtgcaggaaggctatggctttgggtcagatgatccctactcaagtgca
gagccccatgtatcaggtgtgaaacggtcccgctcaggtgagggcgaggtgagcggcctt
atgtgcaaggtcccacgagtgagccttgaacgcctggacctggacctcactgctgacagc
cagccacctgtcttcaaggtcttcccaggcagtaccactgaggactacaaccttattgtt
attgaacgtggcgctgctgctgtagatgccggccagccagggactgtgcctgcaggaacc
cctggtgccccacccctggctggcatggccattgtcaaaaaggaggagacagaagctgcc
attggagcccctcctgctgccactgagggccctgagaccnaacctgtgcttttggctctt
ccagagggtcctggaaccgagggtcctcacctggcctcacccagtggcagcaccagctca
gggctggaggtggtggctcctgggggtacctcagctccaggtggtggtccgggaaccctg
gatgacagtgccaccatttgccgtgtctgccagaagccaggtgatctcgtcatgtgcaac
cagtgtaagttttgtttccacctcgactgccacctgcctgccctgcaggatgttccaggg
gaggagtggagctgctcactctgccatgtgctccctgacctgaaggaggaggatggcagc
ctcagcctggatggtgcagacagcactggtgtggtggccaagctctcaccagtcagccag
cggaaatgtgagcgtgtactgctggccctgttctgtcatgagccctgccgccccctgaat
cagctggctactgactccaccttctctctggaccagcctggtggcaccctggatctgacc
ctgatccatgcccgtcttcaggagaagttgtcacctccctatagctccccacaggagttt
gcccaggatgtgggccgcatgttcaagcaattcaacaagttaactgaggacaaggcagat
gtgcagtccatcatcggcctgcagcgcttcttcaagacgcgcatgaaagaagccttcagt
gacaccaagttctctgctgtgctggtggagcccccaccgatgagtctgcctggtgctagc
ctgagttcccaggagctgtctggtggccctggtgatggcccctga
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