Callithrix jacchus (white-tufted-ear marmoset): 100403625
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Entry
100403625 CDS
T03264
Symbol
PCDHB6
Name
(RefSeq) protocadherin beta-6
KO
K16494
protocadherin beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100403625 (PCDHB6)
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Protocadherins
100403625 (PCDHB6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100403625
NCBI-ProteinID:
XP_054105866
UniProt:
F7I9V0
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All DBs
Position
2:37583197..37586116
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AA seq
794 aa
AA seq
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MKQTKAHNKKRQVTFFILLVLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELAA
RGARVVFKGNRQHLQLDPQTHDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQASL
LVRDINDHAPEFSAGKMLLKISEITTPGKIFPLKMAHDLDTGSNGLQSYTISSNPHFHVL
TRNRSEGRKFPELVLNKPLDREEQPRLRLTLTALDGGSPPRSGTSEIQIQVLDINDNVPE
FAQELYEAQVPENNPLGSLIITVSARDLDAGSFGEVSYALFQDDDVNQPFEINAITGEIR
LRKALDFEEVQSYDVDVEATDGGGLTGKCSLVVRVLDVNDNAPELTMSFLISPIPENLPE
IIVAVFSVSDADSGHNQQVICSIENNLPFLLRPSMENFYTIVTEGALDRETRAEYNIIII
VTDLGTPRLKTEHSITVRVSDVNDNAPAFTQTSYTLFVRENNSPALHIGTVSATDRDSGT
NAQVTYSLLQPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALS
SEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRVAEPGYLVTKVVAVDGDSGQNAWL
SFQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPRSATATLHVLL
VDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASV
GGCSVTEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSATSEFKFLKPIIPNFSPQGTERE
IEETPTFRNSFPFS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaactaaagcacataacaagaaaaggcaagtgacgttcttcattttattggtg
ctttggggagaggtgggttctgaatcgattcagtattccgtattggaggagacagaaagt
ggcacatttgtggccaacttgacaaaggatctgggactgagggtgggggagctggctgca
cgaggcgcccgggttgttttcaaagggaacagacaacatttgcagctggatccacagacc
catgatttactgctaaatgaaaaattggaccgggaggagctgtgtggccccactgagccg
tgtgtgctacctttccaagtgttactggaaaatcccttgcagttttttcaggcttccttg
ctagtcagagatataaatgaccacgccccggaattctctgccggaaaaatgctcctgaaa
atatcagaaattactacgcctggaaagatatttcctttaaaaatggcacatgatttagac
actggcagcaacggccttcagagctacacaatcagctccaaccctcacttccatgttctc
acccggaatcgcagcgaaggcaggaagttcccggagctggtgctgaacaaaccgctggac
cgcgaggagcagccccgactcaggctaacgctcaccgcgctggatggcgggtctccgccc
aggtcagggacctctgagattcagatccaggttttggacatcaatgacaacgtccccgag
tttgctcaggagctctatgaagcgcaagtccctgagaacaaccccctgggctctctaatt
attaccgtctcagccagagatttagatgcaggatcgtttggggaggtatcttacgccctg
tttcaagacgatgatgtcaaccaaccattcgaaataaacgcaatcacaggagaaattcgg
ctgagaaaggctttggattttgaggaagttcagtcatatgacgtggatgttgaggcgaca
gatggcggaggcctaacaggaaaatgctctttagtcgtcagggtcctggacgtgaatgac
aacgcccctgaattgaccatgtcgttcctcatcagccccatcccagaaaacttgccagag
atcatagtggcagttttcagtgtttcagatgcagactctggacataaccaacaggttatt
tgttcaatagaaaacaatcttccctttctactaagaccttccatggagaatttctacacc
atagtaacagaaggcgcgctggatagagagaccagagccgagtacaacatcattatcatc
gtcacagacttggggacacccaggcttaaaaccgagcacagcataaccgtgcgggtctcc
gacgtcaatgacaacgcccccgccttcactcaaacctcctacaccctcttcgtccgcgag
aacaacagcccggccctgcacatcggcaccgtcagcgccacagacagagactcaggcacc
aacgcccaggtcacctactcgctgctgcagccccaggacccgcacctgcccctcgcctcc
ctggtctccatcaacgcggacaacggacacctgttcgccctccggtcgctggactacgag
gccctgcaggcgttcgagttccgcgtgggcgccacagaccgcggctccccggcgctgagc
agcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttcgtgctg
tacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggtggccgagccg
ggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctggctg
tcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaatggc
gaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaagcacaggctgctggtg
ctggtcaaggacaatggcgagcctccgcgctcggccaccgccacgctgcacgtgctcctg
gtggacggcttctcccagccctacctgccgctcccggaggcggccccggcccaggcccag
gctgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcgctcttcctg
ttctcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcggcctctgtg
ggtggctgctcggtgaccgagggtccctttccagggcatctggtggacgtgagcggcacc
gggaccctgtcccagagctaccagtacgaggtgtgtctgacgggaggctccgcgacaagt
gagttcaagttcctgaagccgattatccccaacttctctcctcagggcactgagagagaa
atagaagaaacccccacctttcggaatagcttcccattcagttaa
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