Callithrix jacchus (white-tufted-ear marmoset): 100403680
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Entry
100403680 CDS
T03264
Symbol
DHX58
Name
(RefSeq) ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100403680 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cjc04054
]
100403680 (DHX58)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100403680 (DHX58)
Pattern recognition receptors [BR:
cjc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100403680 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_19
Herpes_UL25
NNH1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100403680
NCBI-ProteinID:
XP_002748669
Ensembl:
ENSCJAG00000014852
UniProt:
U3FG31
LinkDB
All DBs
Position
5:87128701..87142557
Genome browser
AA seq
678 aa
AA seq
DB search
MELRPYQQEVITPALEGKNIIIWLPTGAGKTRAAAYVARQHLETVDGAKVVVLVNRVHLV
TQHGEEFSRMLDGRWTMTTLSGDMGPRAGFGHLARCHDLLICTAKLLQMALTSPEEEEHV
ELTAFSLIVVDECHHTHKDTVYNIIMSQYLELKLQRARPLPQVLGLTASPGTGGASKLDG
AINHVLQLCANLDTWCITSPQNCFPQLQEHNQQPCKQYDLCQRRSQDPFGDLLKKLMDQI
HDHLEMPELSRDFGKQTYEQQVVKLSETAALAGLLEQRVYALHLRRYNDALLIHDTVRAV
DALAALQNFYQREHATKTQILCAERWLLALFNDHKDMLAHLATHGLENPKLEMLEKILQK
QFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRPQLLIGSGNSSQRTHMTQKDQ
QEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGESVYS
FVATKGSRELQRELINEALETLMEQAVAAVQKMDRAEYQAKIRDLQQAAVTKRVAQAAQR
ESQRQQFPKEHVQLLCINCMAAVGHGSDLRKVEGAHHVNVNPNFSIYYNVSKEPVVINRV
FKDWKPGGVISCRNCGEVWGLQIIYKSVKLPALKVRSMLLQTPQGRIQAKKWSRVPFPVP
DFDFLQHCAQNLMDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcgaccctaccaacaggaggtgatcacgcctgccctggagggcaagaatatc
atcatctggctgcccaccggtgctgggaagacccgggcggctgcttatgtggccaggcag
cacctagagactgtggatggagccaaggtggttgtattggtcaacagggtgcacctggtg
acccagcatggtgaagagttcagccgcatgctagatggacgctggaccatgacaaccctg
agtggggacatggggccacgtgctggctttggccacctggctcggtgccatgacctgctc
atctgcacagcaaagctgctgcagatggcactaaccagccctgaggaggaggagcacgtg
gagctcacagccttctctctgatcgtggtggatgagtgccaccacacccacaaggacact
gtctacaacatcatcatgagccagtacctagaacttaaactccagagggcacggcccctg
ccccaggtgttgggtctcacagcctccccaggcaccggcggggcctccaagctcgatgga
gccatcaaccacgtcctacagctctgtgccaacttggacacgtggtgcatcacatcaccc
cagaactgcttcccccagctgcaggagcacaaccagcagccctgcaaacagtacgacctc
tgccaaaggcgcagtcaggatccgtttggggacttgctgaagaagctcatggaccaaatc
cacgaccacctggagatgcctgagttgagtcgggactttgggaaacagacgtatgagcag
caggtggtgaagctgagcgagactgcggctttggctgggctcctggagcagcgggtttac
gcgcttcacctgaggcgctacaatgacgcgctcctcatccacgacactgtccgcgccgtg
gacgccctggctgcgctgcagaatttctatcaaagggagcatgccactaaaacccagatc
ctgtgtgctgagcgctggctgctggccctgttcaatgaccacaaggatatgctggcccac
ttggcaactcatggcctggagaatccaaaactggagatgctggaaaagatcctgcagaag
cagttcaggagctctgacagcccccggggcatcatcttcacccgcacccgccagagtgcg
cactccctcctgctctggctccagcagcagccgggcctgcagactgtggacatccggccc
cagttactgattggatctgggaacagcagccagagaacccacatgacccagaaggaccag
caagaagtgatccggaagttccgagatggaaccctgaaccttctggtggccaccagtgtg
gcggaggaggggctggatatcccacagtgcaacgtggtggtgcgctatgggctcctaacc
aatgagatctccatggtccaggccagaggtcgtgcccgagcgggtgagagtgtgtactca
tttgtagcaactaagggtagtcgggagctgcagcgggagctgatcaacgaggcgctggag
acgctgatggagcaggcagtggctgctgtgcagaaaatggaccgggccgagtaccaggcc
aagatccgggatctgcagcaggcagccgtgaccaagcgtgtagcccaggcagcccagcgc
gagagccagcggcagcagttccccaaggaacacgtgcagctactctgcatcaactgcatg
gcggctgtgggccatggcagtgacctgcggaaggtggagggcgcccaccacgtcaacgtg
aaccccaacttctcgatctactataacgtctccaaagagcctgtggtcatcaacagagtc
ttcaaggactggaaacctgggggtgtcatcagctgcaggaactgtggggaggtctggggt
ctgcagataatctacaaatcagtgaagctaccagcgctcaaagtccgcagcatgcttctg
cagacccctcaagggcggattcaggccaaaaagtggtcccgcgtgcccttccctgtgcct
gactttgacttcctgcagcactgtgcccagaacctgatggacctctccttggactga
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