Callithrix jacchus (white-tufted-ear marmoset): 100403902
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Entry
100403902 CDS
T03264
Symbol
COL9A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04151
PI3K-Akt signaling pathway
cjc04510
Focal adhesion
cjc04512
ECM-receptor interaction
cjc04820
Cytoskeleton in muscle cells
cjc04974
Protein digestion and absorption
cjc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100403902 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100403902 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100403902 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100403902 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100403902 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100403902 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjc00535
]
100403902 (COL9A3)
Proteoglycans [BR:
cjc00535
]
Extracellular matrix (ECM) proteoglycans
Others
100403902 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100403902
NCBI-ProteinID:
XP_054111501
Ensembl:
ENSCJAG00000009909
LinkDB
All DBs
Position
5:56078094..56104894
Genome browser
AA seq
732 aa
AA seq
DB search
MGGLCGRGRGRGRGRPPPSHPPPAGHNLPAPTPPPPLRHRAAMAQAPALAPLLPRLLPSF
LLLLTQLLAAAGAQKVGLPGPPGPQGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPGKLGK
PGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPVKAGVSGSP
GGIGLRGPPGPSGLPGLPGPPGLPGPPGHPGVLPEGAADLQCPSICPPGPPGPPGMPGFK
GPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPLGPPGDRGPIGFR
GPPGIPGVPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEPGMPGKDGRNGVP
GLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPGDA
GMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGSMGDPGLPGPQGLXGDMGDRGPG
GAAGPKGDQGIAGSDGLPGDKGEPGPSGLVGPKGESGSRGELGPKGIQGPNGTSGVEGVP
GPPGPLGLQGIPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQLAAHLRKPLAPGS
IGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGDRGDKGAAGAGLD
GPDGDQGPQGPQGVPGSSKDGQDGAPGEPGPPXDPGLPGTIGAQGTPGICDTSACQGAVX
GGVREKSGSRSS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggggggcttgtgcgggcgggggcggggaaggggaaggggccgcccacctccctcccat
ccacctccagccggccacaatctgccggccccgacgccgccgccaccgctcagacatcgc
gcagccatggcccaggcgcccgcgctcgccccgctcctgccccggctcctgccctcgttc
ctgctcctgctcacgcagctcctggcggccgctggggcacagaaagtgggactcccaggc
ccccccggcccccaagggccacccggaaagcccggccaggatggcatcgatggagaagct
ggtcctccgggtctgcctgggcccccaggaccaaagggggccccaggaaagctggggaaa
ccaggagaggctgggctgccgggactgccgggtgttgatggtctcactgggagagatgga
ccccctggacccaagggtgcccctggggaacggggaagtctgggacccccggggccaccc
gggctggggggcaaaggccttcctggaccccctgtgaaggcaggagtgagcggctcccca
ggtgggatcggcctccgaggccccccgggaccttctgggctccctggccttcctggcccc
ccaggacttcccggaccccctggacacccaggagtcctccctgaaggcgctgctgacctc
cagtgcccaagtatctgcccgccaggtcccccagggcccccaggaatgccagggttcaag
ggacccactggctataaaggcgagcaaggggaagtaggcaaggacggcgagaagggtgac
cctggcccccctgggcctgccggcctcccgggcagcgtggggctgcagggcccccgggga
ttacgaggactgccagggccactcgggccccctggggaccggggtcccatcgggttccga
gggccgcctgggatcccaggagtgcccgggaaggcgggtgatcgaggcgagaggggccca
gaagggttccgtggccccaagggtgacctcggcagacctggtcccaagggaacccccgga
gtagccgggccaagtggagagccgggcatgccaggcaaggatggccggaatggcgtgcca
ggacttgatggccagaagggagaggctggtcgcaatggtgctccgggagagaagggcccc
aacgggttgccaggcctccccggacgagcaggctccaaaggcgagaagggagaacggggc
agagctggggagctgggtgaggccggcccctcgggagagccaggtgtccctggagacgct
ggcatgcctggggaacgcggtgaggctggccacaggggctcagcgggggcccttggccca
caaggccctcccggagcccctggtgtccgaggcttccagggccggaagggcagcatggga
gaccctggccttccaggcccccagggcctcncgggtgacatgggtgaccggggtcctgga
ggcgctgcaggacctaagggagaccagggcattgcaggttccgacggtcttcctggggat
aaaggagaaccgggtcctagcggcctggtcggacccaaaggagagtctggcagtcgaggg
gagctgggccccaaaggcatccagggtcccaacggcaccagcggtgttgagggtgtccct
ggcccccctggtcctctgggcctccagggcatcccaggtgttcctggcatcacagggaag
ccgggcgttccggggaaggaggccagtgagcagcgcatcagggagctgtgtggggggatg
atcagcgaacaaattgcacagttagccgcgcacctaaggaagcctttggcaccggggtcc
attggccggcccggtccagctgggccccctgggcccccagggcctccgggctcgattggt
caccctggcgctcgaggaccccccggataccgcggtcccactggggagctgggagacccc
gggcccagaggaaaccagggtgacagaggggacaaaggcgcagcgggagcaggactggac
ggacctgacggagaccaggggccccaaggaccccaaggcgtgcccggcagcagcaaggac
ggccaggacggtgctcctggtgagcctgggcctcctngggatccggggcttccaggcacc
atcggagcccaggggactccggggatctgtgacacctcagcctgccaaggagccgtgnat
ggaggggtcagggaaaaatctggctctagaagctcataa
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integrated database retrieval system
